RNA–Protein interactions for RNA: ENST00000403681.6

HMGA2-204, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HMGA2, Length 4,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-204ENST00000403681 TFAP2BQ92481 460 aa14.23□□□□□ -0.13
HMGA2-204ENST00000403681 TUBGCP3Q96CW5 907 aa14.23□□□□□ -0.13
HMGA2-204ENST00000403681 C1orf50Q9BV19 199 aa14.23□□□□□ -0.13
HMGA2-204ENST00000403681 SDCBP2Q9H190 292 aa14.23□□□□□ -0.13
HMGA2-204ENST00000403681 LIN28AQ9H9Z2 209 aaKnown RBP14.23□□□□□ -0.13
HMGA2-204ENST00000403681 FNDC3AQ9Y2H6 1198 aaKnown RBP14.23□□□□□ -0.13
HMGA2-204ENST00000403681 GMEB1Q9Y692 573 aa14.23□□□□□ -0.13
HMGA2-204ENST00000403681 TOMM70O94826 608 aa14.23□□□□□ -0.13
HMGA2-204ENST00000403681 H6PDO95479 791 aa14.23□□□□□ -0.13
HMGA2-204ENST00000403681 PSMB4P28070 264 aa14.23□□□□□ -0.13
HMGA2-204ENST00000403681 HADHAP40939 763 aa14.23□□□□□ -0.13
HMGA2-204ENST00000403681 THOP1P52888 689 aa14.23□□□□□ -0.13
HMGA2-204ENST00000403681 SLC5A3P53794 718 aa14.23□□□□□ -0.13
HMGA2-204ENST00000403681 DPYSQ14117 519 aa14.23□□□□□ -0.13
HMGA2-204ENST00000403681 CSHL1Q14406 222 aa14.23□□□□□ -0.13
HMGA2-204ENST00000403681 TAF12Q16514 161 aa14.23□□□□□ -0.13
HMGA2-204ENST00000403681 ZNF618Q5T7W0 954 aa14.23□□□□□ -0.13
HMGA2-204ENST00000403681 AGAP9Q5VTM2 703 aa14.23□□□□□ -0.13
HMGA2-204ENST00000403681 CATSPER4Q7RTX7 472 aa14.23□□□□□ -0.13
HMGA2-204ENST00000403681 PLD3Q8IV08 490 aa14.23□□□□□ -0.13
HMGA2-204ENST00000403681 OR52K1Q8NGK4 314 aa14.23□□□□□ -0.13
HMGA2-204ENST00000403681 TSPAN17Q96FV3 270 aa14.23□□□□□ -0.13
HMGA2-204ENST00000403681 MTG1Q9BT17 334 aaPredicted RBP14.23□□□□□ -0.13
HMGA2-204ENST00000403681 PLK2Q9NYY3 685 aa14.23□□□□□ -0.13
HMGA2-204ENST00000403681 ATRNL1Q5VV63 1379 aa14.22□□□□□ -0.13
HMGA2-204ENST00000403681 SLC15A5A6NIM6 579 aa14.22□□□□□ -0.13
HMGA2-204ENST00000403681 MTSS1O43312 755 aa14.22□□□□□ -0.13
HMGA2-204ENST00000403681 ERBB2P04626 1255 aa14.22□□□□□ -0.13
HMGA2-204ENST00000403681 CYP2C8P10632 490 aa14.22□□□□□ -0.13
HMGA2-204ENST00000403681 FCGR1AP12314 374 aa14.22□□□□□ -0.13
HMGA2-204ENST00000403681 XRCC1P18887 633 aaPredicted RBP14.22□□□□□ -0.13
HMGA2-204ENST00000403681 ETFBP38117 255 aa14.22□□□□□ -0.13
HMGA2-204ENST00000403681 KCNK10P57789 538 aa14.22□□□□□ -0.13
HMGA2-204ENST00000403681 HERC6Q8IVU3 1022 aa14.22□□□□□ -0.13
HMGA2-204ENST00000403681 ANKLE1Q8NAG6 615 aa14.22□□□□□ -0.13
HMGA2-204ENST00000403681 CEP19Q96LK0 163 aa14.22□□□□□ -0.13
HMGA2-204ENST00000403681 SEPHS2Q99611 448 aa14.22□□□□□ -0.13
HMGA2-204ENST00000403681 APBA2Q99767 749 aa14.22□□□□□ -0.13
HMGA2-204ENST00000403681 PLEKHA5Q9HAU0 1116 aa14.22□□□□□ -0.13
HMGA2-204ENST00000403681 SYNPO2Q9UMS6 1093 aa14.22□□□□□ -0.13
HMGA2-204ENST00000403681 TOP3BO95985 862 aaKnown RBP14.22□□□□□ -0.13
HMGA2-204ENST00000403681 APOA1P02647 267 aa14.22□□□□□ -0.13
HMGA2-204ENST00000403681 KCTD2Q14681 263 aa14.22□□□□□ -0.13
HMGA2-204ENST00000403681 CCDC126Q96EE4 140 aa14.22□□□□□ -0.13
HMGA2-204ENST00000403681 PHF21BQ96EK2 531 aa14.22□□□□□ -0.13
HMGA2-204ENST00000403681 COQ10BQ9H8M1 238 aa14.22□□□□□ -0.13
HMGA2-204ENST00000403681 KCNK13Q9HB14 408 aa14.22□□□□□ -0.13
HMGA2-204ENST00000403681 PCDH18Q9HCL0 1135 aa14.22□□□□□ -0.13
HMGA2-204ENST00000403681 SPAG4Q9NPE6 437 aa14.22□□□□□ -0.13
HMGA2-204ENST00000403681 BARX2Q9UMQ3 279 aaPredicted RBP14.22□□□□□ -0.13
HMGA2-204ENST00000403681 ANKRD33BA6NCL7 494 aa14.22□□□□□ -0.13
HMGA2-204ENST00000403681 TIPRLO75663 272 aa14.22□□□□□ -0.13
HMGA2-204ENST00000403681 ARHGDIAP52565 204 aa14.22□□□□□ -0.13
HMGA2-204ENST00000403681 NSUN2Q08J23 767 aaKnown RBP eCLIP14.22□□□□□ -0.13
HMGA2-204ENST00000403681 TLR1Q15399 786 aa14.22□□□□□ -0.13
HMGA2-204ENST00000403681 ZCCHC7Q8N3Z6 543 aaKnown RBP14.22□□□□□ -0.13
HMGA2-204ENST00000403681 ZBTB18Q99592 522 aa14.22□□□□□ -0.13
HMGA2-204ENST00000403681 CAB39LQ9H9S4 337 aa14.22□□□□□ -0.13
HMGA2-204ENST00000403681 VPS45Q9NRW7 570 aa14.22□□□□□ -0.13
HMGA2-204ENST00000403681 DDX43Q9NXZ2 648 aaKnown RBP14.22□□□□□ -0.13
HMGA2-204ENST00000403681 ADAM28Q9UKQ2 775 aa14.22□□□□□ -0.13
HMGA2-204ENST00000403681 ZNF536O15090 1300 aa14.22□□□□□ -0.13
HMGA2-204ENST00000403681 MYOCOSA0A1B0GUC4 107 aa14.21□□□□□ -0.13
HMGA2-204ENST00000403681 KANSL1LA0AUZ9 987 aa14.21□□□□□ -0.13
HMGA2-204ENST00000403681 M0QYT0 321 aa14.21□□□□□ -0.13
HMGA2-204ENST00000403681 PSMD3O43242 534 aa14.21□□□□□ -0.13
HMGA2-204ENST00000403681 VNN1O95497 513 aa14.21□□□□□ -0.13
HMGA2-204ENST00000403681 C2P06681 752 aa14.21□□□□□ -0.13
HMGA2-204ENST00000403681 NFKBIAP25963 317 aa14.21□□□□□ -0.13
HMGA2-204ENST00000403681 CYP51A1Q16850 503 aa14.21□□□□□ -0.13
HMGA2-204ENST00000403681 CTC1Q2NKJ3 1217 aa14.21□□□□□ -0.13
HMGA2-204ENST00000403681 GADL1Q6ZQY3 521 aa14.21□□□□□ -0.13
HMGA2-204ENST00000403681 FAM183BPQ6ZVS7 135 aa14.21□□□□□ -0.13
HMGA2-204ENST00000403681 PHC3Q8NDX5 983 aa14.21□□□□□ -0.13
HMGA2-204ENST00000403681 FBXL18Q96ME1 805 aa14.21□□□□□ -0.13
HMGA2-204ENST00000403681 TCF12Q99081 682 aa14.21□□□□□ -0.13
HMGA2-204ENST00000403681 ANGPTL3Q9Y5C1 460 aa14.21□□□□□ -0.13
HMGA2-204ENST00000403681 PCDHB12Q9Y5F1 795 aa14.21□□□□□ -0.13
HMGA2-204ENST00000403681 MATN2O00339 956 aa14.21□□□□□ -0.13
HMGA2-204ENST00000403681 HOXA10P31260 410 aaPredicted RBP14.21□□□□□ -0.13
HMGA2-204ENST00000403681 PTPN7P35236 360 aa14.21□□□□□ -0.13
HMGA2-204ENST00000403681 ACADSBP45954 432 aa14.21□□□□□ -0.13
HMGA2-204ENST00000403681 CDK18Q07002 472 aa14.21□□□□□ -0.13
HMGA2-204ENST00000403681 CCNIQ14094 377 aa14.21□□□□□ -0.13
HMGA2-204ENST00000403681 CCDC80Q76M96 950 aa14.21□□□□□ -0.13
HMGA2-204ENST00000403681 TTC30AQ86WT1 665 aa14.21□□□□□ -0.13
HMGA2-204ENST00000403681 XYLT1Q86Y38 959 aa14.21□□□□□ -0.13
HMGA2-204ENST00000403681 SPATA33Q96N06 139 aa14.21□□□□□ -0.13
HMGA2-204ENST00000403681 LGMNQ99538 433 aa14.21□□□□□ -0.13
HMGA2-204ENST00000403681 TRNAU1APQ9NX07 287 aaKnown RBP14.21□□□□□ -0.13
HMGA2-204ENST00000403681 ARHGAP28Q9P2N2 729 aa14.21□□□□□ -0.13
HMGA2-204ENST00000403681 GRIN3BO60391 1043 aa14.21□□□□□ -0.13
HMGA2-204ENST00000403681 LDLRP01130 860 aa14.21□□□□□ -0.13
HMGA2-204ENST00000403681 NOVP48745 357 aa14.21□□□□□ -0.13
HMGA2-204ENST00000403681 C6orf10Q5SRN2 563 aa14.21□□□□□ -0.13
HMGA2-204ENST00000403681 PERM1Q5SV97 790 aa14.21□□□□□ -0.13
HMGA2-204ENST00000403681 FRA10AC1Q70Z53 315 aa14.21□□□□□ -0.13
HMGA2-204ENST00000403681 ZFP28Q8NHY6 868 aa14.21□□□□□ -0.13
HMGA2-204ENST00000403681 SLC7A14Q8TBB6 771 aa14.21□□□□□ -0.13
HMGA2-204ENST00000403681 MAGEE2Q8TD90 523 aaPredicted RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms