RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, human

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CEACAM1-208	ENST00000403461	TRIM68	Q6AZZ1	485 aa		7.22	□□□□□ -1.25
CEACAM1-208	ENST00000403461	TCEAL6	Q6IPX3	200 aa		7.22	□□□□□ -1.25
CEACAM1-208	ENST00000403461	PKN3	Q6P5Z2	889 aa		7.22	□□□□□ -1.25
CEACAM1-208	ENST00000403461	ARHGAP36	Q6ZRI8	547 aa		7.22	□□□□□ -1.25
CEACAM1-208	ENST00000403461	UBE2R2	Q712K3	238 aa	Predicted RBP	7.22	□□□□□ -1.25
CEACAM1-208	ENST00000403461	LRRTM3	Q86VH5	581 aa		7.22	□□□□□ -1.25
CEACAM1-208	ENST00000403461	MON1A	Q86VX9	555 aa		7.22	□□□□□ -1.25
CEACAM1-208	ENST00000403461	OSTM1	Q86WC4	334 aa		7.22	□□□□□ -1.25
CEACAM1-208	ENST00000403461	TRIM48	Q8IWZ4	208 aa		7.22	□□□□□ -1.25
CEACAM1-208	ENST00000403461	TTC9B	Q8N6N2	239 aa		7.22	□□□□□ -1.25
CEACAM1-208	ENST00000403461	OR10T2	Q8NGX3	314 aa		7.22	□□□□□ -1.25
CEACAM1-208	ENST00000403461	ZCCHC14	Q8WYQ9	949 aa	Known RBP	7.22	□□□□□ -1.25
CEACAM1-208	ENST00000403461	USP13	Q92995	863 aa	Predicted RBP	7.22	□□□□□ -1.25
CEACAM1-208	ENST00000403461	CD101	Q93033	1021 aa		7.22	□□□□□ -1.25
CEACAM1-208	ENST00000403461	TCEAL3	Q969E4	200 aa		7.22	□□□□□ -1.25
CEACAM1-208	ENST00000403461	ZNF560	Q96MR9	790 aa		7.22	□□□□□ -1.25
CEACAM1-208	ENST00000403461	PYM1	Q9BRP8	204 aa	Known RBP	7.22	□□□□□ -1.25
CEACAM1-208	ENST00000403461	LLPH	Q9BRT6	129 aa	Known RBP	7.22	□□□□□ -1.25
CEACAM1-208	ENST00000403461	SLC46A2	Q9BY10	475 aa		7.22	□□□□□ -1.25
CEACAM1-208	ENST00000403461	ZCWPW1	Q9H0M4	648 aa		7.22	□□□□□ -1.25
CEACAM1-208	ENST00000403461	DUS2	Q9NX74	493 aa	Known RBP	7.22	□□□□□ -1.25
CEACAM1-208	ENST00000403461	RALY	Q9UKM9	306 aa	Known RBP	7.22	□□□□□ -1.25
CEACAM1-208	ENST00000403461	MAGED2	Q9UNF1	606 aa	Predicted RBP	7.22	□□□□□ -1.25
CEACAM1-208	ENST00000403461	FANCM	Q8IYD8	2048 aa		7.22	□□□□□ -1.25
CEACAM1-208	ENST00000403461	MIA3	Q5JRA6	1907 aa		7.21	□□□□□ -1.25
CEACAM1-208	ENST00000403461	MYH15	Q9Y2K3	1946 aa		7.21	□□□□□ -1.25
CEACAM1-208	ENST00000403461	WDR87	Q6ZQQ6	2873 aa		7.21	□□□□□ -1.26
CEACAM1-208	ENST00000403461	TRAV19	A0A0A6YYK7	116 aa		7.21	□□□□□ -1.26
CEACAM1-208	ENST00000403461	ZNF561-AS1	K7EIQ3	104 aa		7.21	□□□□□ -1.26
CEACAM1-208	ENST00000403461	CYB561D2	O14569	222 aa		7.21	□□□□□ -1.26
CEACAM1-208	ENST00000403461	TBCA	O75347	108 aa	Known RBP	7.21	□□□□□ -1.26
CEACAM1-208	ENST00000403461	KRT18	P05783	430 aa	Known RBP	7.21	□□□□□ -1.26
CEACAM1-208	ENST00000403461	HAPLN1	P10915	354 aa	Predicted RBP	7.21	□□□□□ -1.26
CEACAM1-208	ENST00000403461	NCAM1	P13591	858 aa		7.21	□□□□□ -1.26
CEACAM1-208	ENST00000403461	ATF6	P18850	670 aa		7.21	□□□□□ -1.26
CEACAM1-208	ENST00000403461	POU3F2	P20265	443 aa	Predicted RBP	7.21	□□□□□ -1.26
CEACAM1-208	ENST00000403461	NMT1	P30419	496 aa	Known RBP	7.21	□□□□□ -1.26
CEACAM1-208	ENST00000403461	PNPLA4	P41247	253 aa		7.21	□□□□□ -1.26
CEACAM1-208	ENST00000403461	TNFSF9	P41273	254 aa		7.21	□□□□□ -1.26
CEACAM1-208	ENST00000403461	DHPS	P49366	369 aa	Predicted RBP	7.21	□□□□□ -1.26
CEACAM1-208	ENST00000403461	TAF6	P49848	677 aa		7.21	□□□□□ -1.26
CEACAM1-208	ENST00000403461	GUCY2F	P51841	1108 aa		7.21	□□□□□ -1.26
CEACAM1-208	ENST00000403461	CDR1	P51861	262 aa		7.21	□□□□□ -1.26
CEACAM1-208	ENST00000403461	ATXN3	P54252	364 aa	Predicted RBP	7.21	□□□□□ -1.26
CEACAM1-208	ENST00000403461	BYSL	Q13895	437 aa	Known RBP	7.21	□□□□□ -1.26
CEACAM1-208	ENST00000403461	KCNB1	Q14721	858 aa		7.21	□□□□□ -1.26
CEACAM1-208	ENST00000403461	MTF1	Q14872	753 aa		7.21	□□□□□ -1.26
CEACAM1-208	ENST00000403461	ZBTB6	Q15916	424 aa		7.21	□□□□□ -1.26
CEACAM1-208	ENST00000403461	UAP1L1	Q3KQV9	507 aa		7.21	□□□□□ -1.26
CEACAM1-208	ENST00000403461	FBLN7	Q53RD9	439 aa		7.21	□□□□□ -1.26
CEACAM1-208	ENST00000403461	C9orf57	Q5W0N0	161 aa		7.21	□□□□□ -1.26
CEACAM1-208	ENST00000403461	TXNDC8	Q6A555	127 aa		7.21	□□□□□ -1.26
CEACAM1-208	ENST00000403461	SLFN12L	Q6IEE8	588 aa		7.21	□□□□□ -1.26
CEACAM1-208	ENST00000403461	SYDE1	Q6ZW31	735 aa	Predicted RBP	7.21	□□□□□ -1.26
CEACAM1-208	ENST00000403461	OVCH1	Q7RTY7	1134 aa		7.21	□□□□□ -1.26
CEACAM1-208	ENST00000403461	MIB1	Q86YT6	1006 aa		7.21	□□□□□ -1.26
CEACAM1-208	ENST00000403461	MYCT1	Q8N699	235 aa		7.21	□□□□□ -1.26
CEACAM1-208	ENST00000403461	SYT2	Q8N9I0	419 aa	Predicted RBP	7.21	□□□□□ -1.26
CEACAM1-208	ENST00000403461	FSIP1	Q8NA03	581 aa		7.21	□□□□□ -1.26
CEACAM1-208	ENST00000403461	FBXO18	Q8NFZ0	1043 aa		7.21	□□□□□ -1.26
CEACAM1-208	ENST00000403461	RASSF8	Q8NHQ8	419 aa		7.21	□□□□□ -1.26
CEACAM1-208	ENST00000403461	MZB1	Q8WU39	189 aa		7.21	□□□□□ -1.26
CEACAM1-208	ENST00000403461	OSCP1	Q8WVF1	389 aa		7.21	□□□□□ -1.26
CEACAM1-208	ENST00000403461	CPA5	Q8WXQ8	436 aa		7.21	□□□□□ -1.26
CEACAM1-208	ENST00000403461	MSTO1	Q9BUK6	570 aa		7.21	□□□□□ -1.26
CEACAM1-208	ENST00000403461	SGPP1	Q9BX95	441 aa		7.21	□□□□□ -1.26
CEACAM1-208	ENST00000403461	RNF38	Q9H0F5	515 aa		7.21	□□□□□ -1.26
CEACAM1-208	ENST00000403461	ASB7	Q9H672	318 aa		7.21	□□□□□ -1.26
CEACAM1-208	ENST00000403461	TMEM206	Q9H813	350 aa		7.21	□□□□□ -1.26
CEACAM1-208	ENST00000403461	ECT2	Q9H8V3	914 aa		7.21	□□□□□ -1.26
CEACAM1-208	ENST00000403461	TRPC7	Q9HCX4	862 aa		7.21	□□□□□ -1.26
CEACAM1-208	ENST00000403461	GCM1	Q9NP62	436 aa		7.21	□□□□□ -1.26
CEACAM1-208	ENST00000403461	HPS4	Q9NQG7	708 aa		7.21	□□□□□ -1.26
CEACAM1-208	ENST00000403461	SAMD15	Q9P1V8	674 aa		7.21	□□□□□ -1.26
CEACAM1-208	ENST00000403461	ASH2L	Q9UBL3	628 aa		7.21	□□□□□ -1.26
CEACAM1-208	ENST00000403461	LIMCH1	Q9UPQ0	1083 aa		7.21	□□□□□ -1.26
CEACAM1-208	ENST00000403461	C2CD2	Q9Y426	696 aa		7.21	□□□□□ -1.26
CEACAM1-208	ENST00000403461	KIF3A	Q9Y496	699 aa		7.21	□□□□□ -1.26
CEACAM1-208	ENST00000403461	PCDHA5	Q9Y5H7	936 aa		7.21	□□□□□ -1.26
CEACAM1-208	ENST00000403461	PATJ	Q8NI35	1801 aa		7.21	□□□□□ -1.26
CEACAM1-208	ENST00000403461	MAP1B	P46821	2468 aa	Known RBP	7.21	□□□□□ -1.26
CEACAM1-208	ENST00000403461	PP2D1	A8MPX8	630 aa		7.2	□□□□□ -1.26
CEACAM1-208	ENST00000403461		H0Y626	953 aa		7.2	□□□□□ -1.26
CEACAM1-208	ENST00000403461	DCLK1	O15075	740 aa		7.2	□□□□□ -1.26
CEACAM1-208	ENST00000403461	TRIM16	O95361	564 aa		7.2	□□□□□ -1.26
CEACAM1-208	ENST00000403461	NFATC1	O95644	943 aa		7.2	□□□□□ -1.26
CEACAM1-208	ENST00000403461	AMY2A	P04746	511 aa		7.2	□□□□□ -1.26
CEACAM1-208	ENST00000403461	TMEM253	P0C7T8	217 aa		7.2	□□□□□ -1.26
CEACAM1-208	ENST00000403461	PLA2G4B	P0C869	781 aa		7.2	□□□□□ -1.26
CEACAM1-208	ENST00000403461	JMJD7	P0C870	316 aa		7.2	□□□□□ -1.26
CEACAM1-208	ENST00000403461	ARSA	P15289	507 aa		7.2	□□□□□ -1.26
CEACAM1-208	ENST00000403461	AMY2B	P19961	511 aa		7.2	□□□□□ -1.26
CEACAM1-208	ENST00000403461	GLDC	P23378	1020 aa		7.2	□□□□□ -1.26
CEACAM1-208	ENST00000403461	CDC25A	P30304	524 aa		7.2	□□□□□ -1.26
CEACAM1-208	ENST00000403461	HOXC13	P31276	330 aa		7.2	□□□□□ -1.26
CEACAM1-208	ENST00000403461	GJA4	P35212	333 aa		7.2	□□□□□ -1.26
CEACAM1-208	ENST00000403461	NCKAP1L	P55160	1127 aa		7.2	□□□□□ -1.26
CEACAM1-208	ENST00000403461	JAM2	P57087	298 aa		7.2	□□□□□ -1.26
CEACAM1-208	ENST00000403461	DLG4	P78352	724 aa		7.2	□□□□□ -1.26
CEACAM1-208	ENST00000403461	TMEM177	Q53S58	311 aa		7.2	□□□□□ -1.26

Retrieved 100 of 20,778 RNA–protein pairs in 42 ms