RNA–Protein interactions for RNA: ENST00000403303.5

CCDC178-204, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 3,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-204ENST00000403303 NRIP3Q9NQ35 241 aa3.98□□□□□ -1.77
CCDC178-204ENST00000403303 KCMF1Q9P0J7 381 aa3.98□□□□□ -1.77
CCDC178-204ENST00000403303 ASB1Q9Y576 335 aa3.98□□□□□ -1.77
CCDC178-204ENST00000403303 CDY1Q9Y6F8 540 aa3.98□□□□□ -1.77
CCDC178-204ENST00000403303 CACNA1FO60840 1977 aa3.98□□□□□ -1.77
CCDC178-204ENST00000403303 A0A0B4J293 547 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 SLC38A8A6NNN8 435 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 ZNF839A8K0R7 811 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 TSPAN4O14817 238 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 FESP07332 822 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 SNRPA1P09661 255 aaKnown RBP3.97□□□□□ -1.77
CCDC178-204ENST00000403303 MYBL1P10243 752 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 SRFP11831 508 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 FCER1AP12319 257 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 IFNAR2P48551 515 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 PGDP52209 483 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 PRR20EP86478 221 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 PRR20CP86479 221 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 PRR20DP86480 221 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 PRR20BP86481 221 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 PRR20AP86496 221 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 GRSF1Q12849 480 aaKnown RBP eCLIP3.97□□□□□ -1.77
CCDC178-204ENST00000403303 TRIM28Q13263 835 aaKnown RBP3.97□□□□□ -1.77
CCDC178-204ENST00000403303 DCTN1Q14203 1278 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 KYNUQ16719 465 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 ALG11Q2TAA5 492 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 PRRT3Q5FWE3 981 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 HABP4Q5JVS0 413 aaKnown RBP3.97□□□□□ -1.77
CCDC178-204ENST00000403303 ATG14Q6ZNE5 492 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 CUZD1Q86UP6 607 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 POGLUT1Q8NBL1 392 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 DEPDC1BQ8WUY9 529 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 SNX33Q8WV41 574 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 RNF31Q96EP0 1072 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 ALPK1Q96QP1 1244 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 HDAC6Q9UBN7 1215 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 AGTPBP1Q9UPW5 1226 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 CRB1P82279 1406 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 H3BM21 787 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 DCLK1O15075 740 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 TP73O15350 636 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 VEGFDO43915 354 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 TPPPO94811 219 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 STMN1P16949 149 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 ATP5JP18859 108 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 LIMS1P48059 325 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 SLC12A3P55017 1021 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 MLLT6P55198 1093 aaPredicted RBP3.97□□□□□ -1.77
CCDC178-204ENST00000403303 EVCP57679 992 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 EIF4A1P60842 406 aaKnown RBP3.97□□□□□ -1.77
CCDC178-204ENST00000403303 RBP5P82980 135 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 DUSP2Q05923 314 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 RAB3GAP1Q15042 981 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 DGKDQ16760 1214 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 DUSP28Q4G0W2 176 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 NOMO2Q5JPE7 1267 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 DGAT2L7PQ6IED9 249 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 C16orf89Q6UX73 402 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 LARP4Q71RC2 724 aaKnown RBP eCLIP3.97□□□□□ -1.77
CCDC178-204ENST00000403303 KANSL1Q7Z3B3 1105 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 ZER1Q7Z7L7 766 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 SDCCAG8Q86SQ7 713 aaPredicted RBP3.97□□□□□ -1.77
CCDC178-204ENST00000403303 BCL6BQ8N143 479 aaPredicted RBP3.97□□□□□ -1.77
CCDC178-204ENST00000403303 NKAIN3Q8N8D7 197 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 C8orf58Q8NAV2 365 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 ZBTB44Q8NCP5 570 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 ZNF622Q969S3 477 aaKnown RBP eCLIP3.97□□□□□ -1.77
CCDC178-204ENST00000403303 SLC22A18Q96BI1 424 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 MYRFLQ96LU7 910 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 KLHL32Q96NJ5 620 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 FOXB1Q99853 325 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 WDCPQ9H6R7 721 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 G6PC2Q9NQR9 355 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.97□□□□□ -1.77
CCDC178-204ENST00000403303 POGKQ9P215 609 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 CAPN7Q9Y6W3 813 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 NPHP3Q7Z494 1330 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 KIAA0232Q92628 1395 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 CCDC187A0A096LP49 1063 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 C1orf226A1L170 272 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 FAM90A20PA6NIJ5 464 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 KCNJ18B7U540 433 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 FAM86B1E9PN63 330 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 KINO60870 393 aaKnown RBP3.97□□□□□ -1.77
CCDC178-204ENST00000403303 SEC24DO94855 1032 aaPredicted RBP3.97□□□□□ -1.77
CCDC178-204ENST00000403303 FAM86B2P0C5J1 330 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 POU1F1P28069 291 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 GUCY1A2P33402 732 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 LMAN1P49257 510 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 MTHFSP49914 203 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 SMSP52788 366 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 ATP2C1P98194 919 aaPredicted RBP3.97□□□□□ -1.77
CCDC178-204ENST00000403303 KCNJ12Q14500 433 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 ZNF827Q17R98 1081 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 SLC5A9Q2M3M2 681 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 ANKDD1AQ495B1 522 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 SLC39A12Q504Y0 691 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 IFI44LQ53G44 452 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 LRCH2Q5VUJ6 765 aa3.97□□□□□ -1.77
CCDC178-204ENST00000403303 MRNIPQ6NTE8 343 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms