RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 CDH19Q9H159 772 aa9.38□□□□□ -0.91
HPS4-203ENST00000402105 ATXN3LQ9H3M9 355 aa9.38□□□□□ -0.91
HPS4-203ENST00000402105 AS3MTQ9HBK9 375 aa9.38□□□□□ -0.91
HPS4-203ENST00000402105 NMRAL1Q9HBL8 299 aa9.38□□□□□ -0.91
HPS4-203ENST00000402105 CCDC167Q9P0B6 97 aa9.38□□□□□ -0.91
HPS4-203ENST00000402105 SF3B1O75533 1304 aaKnown RBP eCLIP9.38□□□□□ -0.91
HPS4-203ENST00000402105 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.37□□□□□ -0.91
HPS4-203ENST00000402105 CCNT2O60583 730 aaKnown RBP9.37□□□□□ -0.91
HPS4-203ENST00000402105 TRIM13O60858 407 aa9.37□□□□□ -0.91
HPS4-203ENST00000402105 ARIH2O95376 493 aa9.37□□□□□ -0.91
HPS4-203ENST00000402105 C1QAP02745 245 aa9.37□□□□□ -0.91
HPS4-203ENST00000402105 ASLP04424 464 aa9.37□□□□□ -0.91
HPS4-203ENST00000402105 C2P06681 752 aa9.37□□□□□ -0.91
HPS4-203ENST00000402105 PABPC4LP0CB38 370 aaKnown RBP9.37□□□□□ -0.91
HPS4-203ENST00000402105 PCSK6P29122 969 aa9.37□□□□□ -0.91
HPS4-203ENST00000402105 GP5P40197 560 aa9.37□□□□□ -0.91
HPS4-203ENST00000402105 PPIDQ08752 370 aaKnown RBP9.37□□□□□ -0.91
HPS4-203ENST00000402105 ARL13AQ5H913 290 aaPredicted RBP9.37□□□□□ -0.91
HPS4-203ENST00000402105 LRRC8EQ6NSJ5 796 aa9.37□□□□□ -0.91
HPS4-203ENST00000402105 UGT2A3Q6UWM9 527 aa9.37□□□□□ -0.91
HPS4-203ENST00000402105 CYP4V2Q6ZWL3 525 aaPredicted RBP9.37□□□□□ -0.91
HPS4-203ENST00000402105 HSPBAP1Q96EW2 488 aa9.37□□□□□ -0.91
HPS4-203ENST00000402105 FCRL3Q96P31 734 aaPredicted RBP9.37□□□□□ -0.91
HPS4-203ENST00000402105 CIB1Q99828 191 aa9.37□□□□□ -0.91
HPS4-203ENST00000402105 C1orf21Q9H246 121 aa9.37□□□□□ -0.91
HPS4-203ENST00000402105 STK32BQ9NY57 414 aa9.37□□□□□ -0.91
HPS4-203ENST00000402105 BFARQ9NZS9 450 aa9.37□□□□□ -0.91
HPS4-203ENST00000402105 BCLAF3A2AJT9 711 aaKnown RBP9.37□□□□□ -0.91
HPS4-203ENST00000402105 KPNA7A9QM74 516 aa9.37□□□□□ -0.91
HPS4-203ENST00000402105 GPC4O75487 556 aa9.37□□□□□ -0.91
HPS4-203ENST00000402105 PIGRP01833 764 aa9.37□□□□□ -0.91
HPS4-203ENST00000402105 JUNP05412 331 aaKnown RBP9.37□□□□□ -0.91
HPS4-203ENST00000402105 TFAP2AP05549 437 aa9.37□□□□□ -0.91
HPS4-203ENST00000402105 DPEP1P16444 411 aa9.37□□□□□ -0.91
HPS4-203ENST00000402105 PTPRAP18433 802 aa9.37□□□□□ -0.91
HPS4-203ENST00000402105 ACAT1P24752 427 aaKnown RBP9.37□□□□□ -0.91
HPS4-203ENST00000402105 L1CAMP32004 1257 aa9.37□□□□□ -0.91
HPS4-203ENST00000402105 SPRP35270 261 aaPredicted RBP9.37□□□□□ -0.91
HPS4-203ENST00000402105 ADARP55265 1226 aaKnown RBP9.37□□□□□ -0.91
HPS4-203ENST00000402105 CDKL1Q00532 357 aa9.37□□□□□ -0.91
HPS4-203ENST00000402105 PDAP1Q13442 181 aaKnown RBP9.37□□□□□ -0.91
HPS4-203ENST00000402105 PRPSAP1Q14558 356 aa9.37□□□□□ -0.91
HPS4-203ENST00000402105 DBN1Q16643 649 aa9.37□□□□□ -0.91
HPS4-203ENST00000402105 DGKDQ16760 1214 aa9.37□□□□□ -0.91
HPS4-203ENST00000402105 SOWAHAQ2M3V2 549 aa9.37□□□□□ -0.91
HPS4-203ENST00000402105 GK5Q6ZS86 529 aa9.37□□□□□ -0.91
HPS4-203ENST00000402105 TRIM67Q6ZTA4 783 aa9.37□□□□□ -0.91
HPS4-203ENST00000402105 CTU1Q7Z7A3 348 aaKnown RBP9.37□□□□□ -0.91
HPS4-203ENST00000402105 METTL25Q8N6Q8 603 aa9.37□□□□□ -0.91
HPS4-203ENST00000402105 KCTD4Q8WVF5 259 aa9.37□□□□□ -0.91
HPS4-203ENST00000402105 RNF34Q969K3 372 aa9.37□□□□□ -0.91
HPS4-203ENST00000402105 CELF6Q96J87 481 aaKnown RBP9.37□□□□□ -0.91
HPS4-203ENST00000402105 TMEM79Q9BSE2 394 aa9.37□□□□□ -0.91
HPS4-203ENST00000402105 GCOM2Q9BZD3 368 aaPredicted RBP9.37□□□□□ -0.91
HPS4-203ENST00000402105 PNPLA8Q9NP80 782 aa9.37□□□□□ -0.91
HPS4-203ENST00000402105 PSMD13Q9UNM6 376 aa9.37□□□□□ -0.91
HPS4-203ENST00000402105 RGS2P41220 211 aa9.37□□□□□ -0.91
HPS4-203ENST00000402105 PLOD1Q02809 727 aaPredicted RBP9.37□□□□□ -0.91
HPS4-203ENST00000402105 EN1Q05925 392 aaPredicted RBP9.37□□□□□ -0.91
HPS4-203ENST00000402105 SEPT6Q14141 434 aa9.37□□□□□ -0.91
HPS4-203ENST00000402105 PTK2BQ14289 1009 aa9.37□□□□□ -0.91
HPS4-203ENST00000402105 IFNEQ86WN2 208 aa9.37□□□□□ -0.91
HPS4-203ENST00000402105 DEFB106AQ8N104 65 aa9.37□□□□□ -0.91
HPS4-203ENST00000402105 RYBPQ8N488 228 aaPredicted RBP9.37□□□□□ -0.91
HPS4-203ENST00000402105 URGCPQ8TCY9 931 aa9.37□□□□□ -0.91
HPS4-203ENST00000402105 PTPRHQ9HD43 1115 aa9.37□□□□□ -0.91
HPS4-203ENST00000402105 A0A0A0MRY4 1105 aa9.36□□□□□ -0.91
HPS4-203ENST00000402105 NEMP2A6NFY4 417 aa9.36□□□□□ -0.91
HPS4-203ENST00000402105 SAC3D1A6NKF1 404 aa9.36□□□□□ -0.91
HPS4-203ENST00000402105 KCNU1A8MYU2 1149 aa9.36□□□□□ -0.91
HPS4-203ENST00000402105 H3BNX3 289 aa9.36□□□□□ -0.91
HPS4-203ENST00000402105 M0QYT0 321 aa9.36□□□□□ -0.91
HPS4-203ENST00000402105 AKAP10O43572 662 aa9.36□□□□□ -0.91
HPS4-203ENST00000402105 GSRP00390 522 aa9.36□□□□□ -0.91
HPS4-203ENST00000402105 PSMC3P17980 439 aa9.36□□□□□ -0.91
HPS4-203ENST00000402105 PTPN1P18031 435 aaKnown RBP9.36□□□□□ -0.91
HPS4-203ENST00000402105 PGAM1P18669 254 aa9.36□□□□□ -0.91
HPS4-203ENST00000402105 RBP5P82980 135 aa9.36□□□□□ -0.91
HPS4-203ENST00000402105 CTBP1Q13363 440 aa9.36□□□□□ -0.91
HPS4-203ENST00000402105 SLC10A6Q3KNW5 377 aa9.36□□□□□ -0.91
HPS4-203ENST00000402105 MTX3Q5HYI7 312 aa9.36□□□□□ -0.91
HPS4-203ENST00000402105 C16orf89Q6UX73 402 aa9.36□□□□□ -0.91
HPS4-203ENST00000402105 C18orf25Q96B23 403 aaPredicted RBP9.36□□□□□ -0.91
HPS4-203ENST00000402105 LRRC39Q96DD0 335 aa9.36□□□□□ -0.91
HPS4-203ENST00000402105 ZNF512Q96ME7 567 aaPredicted RBP9.36□□□□□ -0.91
HPS4-203ENST00000402105 SPATA13Q96N96 652 aa9.36□□□□□ -0.91
HPS4-203ENST00000402105 GMLQ99445 158 aa9.36□□□□□ -0.91
HPS4-203ENST00000402105 SLC39A3Q9BRY0 314 aa9.36□□□□□ -0.91
HPS4-203ENST00000402105 MED10Q9BTT4 135 aa9.36□□□□□ -0.91
HPS4-203ENST00000402105 FRMD8Q9BZ67 464 aaPredicted RBP9.36□□□□□ -0.91
HPS4-203ENST00000402105 PDGFCQ9NRA1 345 aa9.36□□□□□ -0.91
HPS4-203ENST00000402105 CHST12Q9NRB3 414 aa9.36□□□□□ -0.91
HPS4-203ENST00000402105 HOXC10Q9NYD6 342 aa9.36□□□□□ -0.91
HPS4-203ENST00000402105 MOCS1Q9NZB8 636 aa9.36□□□□□ -0.91
HPS4-203ENST00000402105 VANGL2Q9ULK5 521 aa9.36□□□□□ -0.91
HPS4-203ENST00000402105 SNX10Q9Y5X0 201 aa9.36□□□□□ -0.91
HPS4-203ENST00000402105 SIPA1L1O43166 1804 aa9.36□□□□□ -0.91
HPS4-203ENST00000402105 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.36□□□□□ -0.91
HPS4-203ENST00000402105 SMIM31A0A1B0GVY4 71 aa9.36□□□□□ -0.91
HPS4-203ENST00000402105 ARHGEF37A1IGU5 675 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms