RNA–Protein interactions for RNA: ENST00000400556.7

PPP4R1-203, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-203ENST00000400556 GATA5Q9BWX5 397 aaPredicted RBP10.81□□□□□ -0.68
PPP4R1-203ENST00000400556 RNF39Q9H2S5 420 aa10.81□□□□□ -0.68
PPP4R1-203ENST00000400556 TASP1Q9H6P5 420 aa10.81□□□□□ -0.68
PPP4R1-203ENST00000400556 ANLNQ9NQW6 1124 aa10.81□□□□□ -0.68
PPP4R1-203ENST00000400556 SETD4Q9NVD3 440 aa10.81□□□□□ -0.68
PPP4R1-203ENST00000400556 DCDC2Q9UHG0 476 aa10.81□□□□□ -0.68
PPP4R1-203ENST00000400556 CSADQ9Y600 493 aa10.81□□□□□ -0.68
PPP4R1-203ENST00000400556 SSC5DA1L4H1 1573 aa10.81□□□□□ -0.68
PPP4R1-203ENST00000400556 A0A1B0GTW7 788 aa10.81□□□□□ -0.68
PPP4R1-203ENST00000400556 GAS2O43903 313 aaKnown RBP10.81□□□□□ -0.68
PPP4R1-203ENST00000400556 C2P06681 752 aa10.81□□□□□ -0.68
PPP4R1-203ENST00000400556 XRCC1P18887 633 aaPredicted RBP10.81□□□□□ -0.68
PPP4R1-203ENST00000400556 MAGEA6P43360 314 aa10.81□□□□□ -0.68
PPP4R1-203ENST00000400556 CDK7P50613 346 aa10.81□□□□□ -0.68
PPP4R1-203ENST00000400556 THOP1P52888 689 aa10.81□□□□□ -0.68
PPP4R1-203ENST00000400556 NAGLUP54802 743 aa10.81□□□□□ -0.68
PPP4R1-203ENST00000400556 ST13P4Q8IZP2 240 aaPredicted RBP10.81□□□□□ -0.68
PPP4R1-203ENST00000400556 CCNYL1Q8N7R7 359 aa10.81□□□□□ -0.68
PPP4R1-203ENST00000400556 RCN3Q96D15 328 aa10.81□□□□□ -0.68
PPP4R1-203ENST00000400556 TMA16Q96EY4 203 aaKnown RBP10.81□□□□□ -0.68
PPP4R1-203ENST00000400556 C20orf96Q9NUD7 363 aaPredicted RBP10.81□□□□□ -0.68
PPP4R1-203ENST00000400556 RBPJLQ9UBG7 517 aa10.81□□□□□ -0.68
PPP4R1-203ENST00000400556 TIMM13Q9Y5L4 95 aaPredicted RBP10.81□□□□□ -0.68
PPP4R1-203ENST00000400556 SF3B1O75533 1304 aaKnown RBP eCLIP10.81□□□□□ -0.682e-6■■■■■ 51.7
PPP4R1-203ENST00000400556 DPYSL4O14531 572 aa10.8□□□□□ -0.68
PPP4R1-203ENST00000400556 KIF3CO14782 793 aa10.8□□□□□ -0.68
PPP4R1-203ENST00000400556 PEX1O43933 1283 aa10.8□□□□□ -0.68
PPP4R1-203ENST00000400556 CNMDO75829 334 aa10.8□□□□□ -0.68
PPP4R1-203ENST00000400556 RPS12P25398 132 aaKnown RBP10.8□□□□□ -0.68
PPP4R1-203ENST00000400556 GNL1P36915 607 aaPredicted RBP10.8□□□□□ -0.68
PPP4R1-203ENST00000400556 GP5P40197 560 aa10.8□□□□□ -0.68
PPP4R1-203ENST00000400556 LRRC8BQ6P9F7 803 aa10.8□□□□□ -0.68
PPP4R1-203ENST00000400556 CATSPER4Q7RTX7 472 aa10.8□□□□□ -0.68
PPP4R1-203ENST00000400556 CMTM5Q96DZ9 223 aa10.8□□□□□ -0.68
PPP4R1-203ENST00000400556 PHF12Q96QT6 1004 aa10.8□□□□□ -0.68
PPP4R1-203ENST00000400556 NR1H4Q96RI1 486 aaPredicted RBP10.8□□□□□ -0.68
PPP4R1-203ENST00000400556 UBE2OQ9C0C9 1292 aaKnown RBP10.8□□□□□ -0.68
PPP4R1-203ENST00000400556 TCF7L2Q9NQB0 619 aa10.8□□□□□ -0.68
PPP4R1-203ENST00000400556 MKS1Q9NXB0 559 aa10.8□□□□□ -0.68
PPP4R1-203ENST00000400556 DDX43Q9NXZ2 648 aaKnown RBP10.8□□□□□ -0.68
PPP4R1-203ENST00000400556 ZBTB24O43167 697 aaPredicted RBP10.8□□□□□ -0.68
PPP4R1-203ENST00000400556 UQCRBP14927 111 aa10.8□□□□□ -0.68
PPP4R1-203ENST00000400556 MX2P20592 715 aa10.8□□□□□ -0.68
PPP4R1-203ENST00000400556 TLR1Q15399 786 aa10.8□□□□□ -0.68
PPP4R1-203ENST00000400556 GSTA3Q16772 222 aa10.8□□□□□ -0.68
PPP4R1-203ENST00000400556 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.8□□□□□ -0.68
PPP4R1-203ENST00000400556 MTHFD1LQ6UB35 978 aa10.8□□□□□ -0.68
PPP4R1-203ENST00000400556 APOBEC3FQ8IUX4 373 aaKnown RBP10.8□□□□□ -0.68
PPP4R1-203ENST00000400556 FBXW8Q8N3Y1 598 aa10.8□□□□□ -0.68
PPP4R1-203ENST00000400556 SLC7A14Q8TBB6 771 aa10.8□□□□□ -0.68
PPP4R1-203ENST00000400556 TRAPPC9Q96Q05 1148 aa10.8□□□□□ -0.68
PPP4R1-203ENST00000400556 APBA2Q99767 749 aa10.8□□□□□ -0.68
PPP4R1-203ENST00000400556 C1orf21Q9H246 121 aa10.8□□□□□ -0.68
PPP4R1-203ENST00000400556 ATXN3LQ9H3M9 355 aa10.8□□□□□ -0.68
PPP4R1-203ENST00000400556 SUDS3Q9H7L9 328 aaPredicted RBP10.8□□□□□ -0.68
PPP4R1-203ENST00000400556 PIGVQ9NUD9 493 aa10.8□□□□□ -0.68
PPP4R1-203ENST00000400556 ARHGAP26Q9UNA1 814 aa10.8□□□□□ -0.68
PPP4R1-203ENST00000400556 DTNAQ9Y4J8 743 aa10.8□□□□□ -0.68
PPP4R1-203ENST00000400556 H3BNX3 289 aa10.8□□□□□ -0.68
PPP4R1-203ENST00000400556 I6L893 689 aaPredicted RBP10.8□□□□□ -0.68
PPP4R1-203ENST00000400556 HDCP19113 662 aa10.8□□□□□ -0.68
PPP4R1-203ENST00000400556 FGFR3P22607 806 aa10.8□□□□□ -0.68
PPP4R1-203ENST00000400556 PMLP29590 882 aa10.8□□□□□ -0.68
PPP4R1-203ENST00000400556 TTLL4Q14679 1199 aa10.8□□□□□ -0.68
PPP4R1-203ENST00000400556 ACTRT2Q8TDY3 377 aa10.8□□□□□ -0.68
PPP4R1-203ENST00000400556 EDEM1Q92611 657 aa10.8□□□□□ -0.68
PPP4R1-203ENST00000400556 GPAMQ9HCL2 828 aa10.8□□□□□ -0.68
PPP4R1-203ENST00000400556 DDX18Q9NVP1 670 aaKnown RBP10.8□□□□□ -0.68
PPP4R1-203ENST00000400556 VANGL2Q9ULK5 521 aa10.8□□□□□ -0.68
PPP4R1-203ENST00000400556 C15orf38-AP3S2A0A0A6YYH1 394 aa10.79□□□□□ -0.68
PPP4R1-203ENST00000400556 CCNT2O60583 730 aaKnown RBP10.79□□□□□ -0.68
PPP4R1-203ENST00000400556 RECQL4O94761 1208 aa10.79□□□□□ -0.68
PPP4R1-203ENST00000400556 PIGNO95427 931 aa10.79□□□□□ -0.68
PPP4R1-203ENST00000400556 LSM12Q3MHD2 195 aaKnown RBP10.79□□□□□ -0.68
PPP4R1-203ENST00000400556 PGM2L1Q6PCE3 622 aa10.79□□□□□ -0.68
PPP4R1-203ENST00000400556 TIFABQ6ZNK6 161 aa10.79□□□□□ -0.68
PPP4R1-203ENST00000400556 ACAD11Q709F0 780 aa10.79□□□□□ -0.68
PPP4R1-203ENST00000400556 SLC26A9Q7LBE3 791 aa10.79□□□□□ -0.68
PPP4R1-203ENST00000400556 ARPINQ7Z6K5 226 aa10.79□□□□□ -0.68
PPP4R1-203ENST00000400556 ICA1LQ8NDH6 482 aa10.79□□□□□ -0.68
PPP4R1-203ENST00000400556 KCTD4Q8WVF5 259 aa10.79□□□□□ -0.68
PPP4R1-203ENST00000400556 NPAS2Q99743 824 aa10.79□□□□□ -0.68
PPP4R1-203ENST00000400556 CDH19Q9H159 772 aa10.79□□□□□ -0.68
PPP4R1-203ENST00000400556 SEMA6AQ9H2E6 1030 aa10.79□□□□□ -0.68
PPP4R1-203ENST00000400556 MORF4L1Q9UBU8 362 aa10.79□□□□□ -0.68
PPP4R1-203ENST00000400556 ANKRD12Q6UB98 2062 aa10.79□□□□□ -0.68
PPP4R1-203ENST00000400556 NEMP2A6NFY4 417 aa10.79□□□□□ -0.68
PPP4R1-203ENST00000400556 G3V2L1 256 aa10.79□□□□□ -0.68
PPP4R1-203ENST00000400556 EEF2KO00418 725 aaKnown RBP10.79□□□□□ -0.68
PPP4R1-203ENST00000400556 ALDH1A2O94788 518 aa10.79□□□□□ -0.68
PPP4R1-203ENST00000400556 NMBRP28336 390 aa10.79□□□□□ -0.68
PPP4R1-203ENST00000400556 ALDH1A3P47895 512 aa10.79□□□□□ -0.68
PPP4R1-203ENST00000400556 MS4A2Q01362 244 aa10.79□□□□□ -0.68
PPP4R1-203ENST00000400556 BST2Q10589 180 aaKnown RBP10.79□□□□□ -0.68
PPP4R1-203ENST00000400556 TBCCQ15814 346 aa10.79□□□□□ -0.68
PPP4R1-203ENST00000400556 C6orf52Q5T4I8 152 aa10.79□□□□□ -0.68
PPP4R1-203ENST00000400556 ARMCX2Q7L311 632 aa10.79□□□□□ -0.68
PPP4R1-203ENST00000400556 RNF135Q8IUD6 432 aa10.79□□□□□ -0.68
PPP4R1-203ENST00000400556 NPWQ8N729 165 aa10.79□□□□□ -0.68
PPP4R1-203ENST00000400556 URGCPQ8TCY9 931 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms