RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 ATP5C1P36542 298 aaKnown RBP18.52■□□□□ 0.55
COL18A1-204ENST00000400337 FASTKQ14296 549 aaKnown RBP18.52■□□□□ 0.55
COL18A1-204ENST00000400337 KYAT3Q6YP21 454 aaKnown RBP18.52■□□□□ 0.55
COL18A1-204ENST00000400337 IL22Q9GZX6 179 aa18.52■□□□□ 0.55
COL18A1-204ENST00000400337 CDH9Q9ULB4 789 aa18.52■□□□□ 0.55
COL18A1-204ENST00000400337 IFRD1O00458 451 aaPredicted RBP18.52■□□□□ 0.55
COL18A1-204ENST00000400337 FGF10O15520 208 aaPredicted RBP18.52■□□□□ 0.55
COL18A1-204ENST00000400337 MFSD4BQ5TF39 518 aa18.52■□□□□ 0.55
COL18A1-204ENST00000400337 ZNF614Q8N883 585 aa18.52■□□□□ 0.55
COL18A1-204ENST00000400337 C18orf25Q96B23 403 aaPredicted RBP18.52■□□□□ 0.55
COL18A1-204ENST00000400337 KLRG1Q96E93 195 aa18.52■□□□□ 0.55
COL18A1-204ENST00000400337 PADI4Q9UM07 663 aa18.52■□□□□ 0.55
COL18A1-204ENST00000400337 KRT87PA6NCN2 255 aa18.51■□□□□ 0.55
COL18A1-204ENST00000400337 DCXO43602 365 aa18.51■□□□□ 0.55
COL18A1-204ENST00000400337 FGFR1P11362 822 aa18.51■□□□□ 0.55
COL18A1-204ENST00000400337 TRAF2Q12933 501 aa18.51■□□□□ 0.55
COL18A1-204ENST00000400337 RAP1GAP2Q684P5 730 aa18.51■□□□□ 0.55
COL18A1-204ENST00000400337 RNF148Q8N7C7 305 aa18.51■□□□□ 0.55
COL18A1-204ENST00000400337 MFSD14AQ96MC6 490 aa18.51■□□□□ 0.55
COL18A1-204ENST00000400337 CYP1A1P04798 512 aaPredicted RBP18.51■□□□□ 0.55
COL18A1-204ENST00000400337 SNHG28P0DPA3 235 aa18.51■□□□□ 0.55
COL18A1-204ENST00000400337 MRPS15P82914 257 aaKnown RBP18.51■□□□□ 0.55
COL18A1-204ENST00000400337 MAP2K5Q13163 448 aa18.51■□□□□ 0.55
COL18A1-204ENST00000400337 TPGS1Q6ZTW0 290 aa18.51■□□□□ 0.55
COL18A1-204ENST00000400337 ZNF513Q8N8E2 541 aaPredicted RBP18.51■□□□□ 0.55
COL18A1-204ENST00000400337 RIN3Q8TB24 985 aa18.51■□□□□ 0.55
COL18A1-204ENST00000400337 DPF3Q92784 378 aa18.51■□□□□ 0.55
COL18A1-204ENST00000400337 SERAC1Q96JX3 654 aa18.51■□□□□ 0.55
COL18A1-204ENST00000400337 ZMAT2Q96NC0 199 aaKnown RBP18.51■□□□□ 0.55
COL18A1-204ENST00000400337 PRDM16Q9HAZ2 1276 aa18.51■□□□□ 0.55
COL18A1-204ENST00000400337 TMCC3Q9ULS5 477 aa18.51■□□□□ 0.55
COL18A1-204ENST00000400337 MYBL2P10244 700 aa18.51■□□□□ 0.55
COL18A1-204ENST00000400337 IMPDH2P12268 514 aa18.51■□□□□ 0.55
COL18A1-204ENST00000400337 POU1F1P28069 291 aa18.51■□□□□ 0.55
COL18A1-204ENST00000400337 TNFRSF8P28908 595 aa18.51■□□□□ 0.55
COL18A1-204ENST00000400337 TBCELQ5QJ74 424 aa18.51■□□□□ 0.55
COL18A1-204ENST00000400337 ARMC12Q5T9G4 340 aa18.51■□□□□ 0.55
COL18A1-204ENST00000400337 ZNF662Q6ZS27 426 aa18.51■□□□□ 0.55
COL18A1-204ENST00000400337 OR56A4Q8NGH8 313 aa18.51■□□□□ 0.55
COL18A1-204ENST00000400337 LRRN4Q8WUT4 740 aa18.51■□□□□ 0.55
COL18A1-204ENST00000400337 MIEF1Q9NQG6 463 aa18.51■□□□□ 0.55
COL18A1-204ENST00000400337 CROTQ9UKG9 612 aa18.51■□□□□ 0.55
COL18A1-204ENST00000400337 NDUFAF1Q9Y375 327 aa18.51■□□□□ 0.55
COL18A1-204ENST00000400337 PLCL1Q15111 1095 aa18.51■□□□□ 0.55
COL18A1-204ENST00000400337 PALB2Q86YC2 1186 aa18.51■□□□□ 0.55
COL18A1-204ENST00000400337 IRF2BP1Q8IU81 584 aa18.51■□□□□ 0.55
COL18A1-204ENST00000400337 DTNBP1Q96EV8 351 aa18.51■□□□□ 0.55
COL18A1-204ENST00000400337 SEPHS2Q99611 448 aa18.51■□□□□ 0.55
COL18A1-204ENST00000400337 STN1Q9H668 368 aaKnown RBP18.51■□□□□ 0.55
COL18A1-204ENST00000400337 WDR41Q9HAD4 459 aa18.51■□□□□ 0.55
COL18A1-204ENST00000400337 FAM50BQ9Y247 325 aa18.51■□□□□ 0.55
COL18A1-204ENST00000400337 RNF225M0QZC1 329 aaPredicted RBP18.5■□□□□ 0.55
COL18A1-204ENST00000400337 BANF1O75531 89 aa18.5■□□□□ 0.55
COL18A1-204ENST00000400337 FARP2O94887 1054 aaPredicted RBP18.5■□□□□ 0.55
COL18A1-204ENST00000400337 RRM2P31350 389 aa18.5■□□□□ 0.55
COL18A1-204ENST00000400337 CDK16Q00536 496 aa18.5■□□□□ 0.55
COL18A1-204ENST00000400337 AUHQ13825 339 aaKnown RBP18.5■□□□□ 0.55
COL18A1-204ENST00000400337 LRP10Q7Z4F1 713 aa18.5■□□□□ 0.55
COL18A1-204ENST00000400337 SH3BP4Q9P0V3 963 aa18.5■□□□□ 0.55
COL18A1-204ENST00000400337 RASSF9O75901 435 aa18.5■□□□□ 0.55
COL18A1-204ENST00000400337 LYPLA2O95372 231 aa18.5■□□□□ 0.55
COL18A1-204ENST00000400337 TAS2R40P59535 323 aa18.5■□□□□ 0.55
COL18A1-204ENST00000400337 VAC14Q08AM6 782 aa18.5■□□□□ 0.55
COL18A1-204ENST00000400337 PCID2Q5JVF3 399 aa18.5■□□□□ 0.55
COL18A1-204ENST00000400337 ZNF446Q9NWS9 450 aa18.5■□□□□ 0.55
COL18A1-204ENST00000400337 ZMYM5Q9UJ78 669 aa18.5■□□□□ 0.55
COL18A1-204ENST00000400337 SCAMP3O14828 347 aaKnown RBP18.5■□□□□ 0.55
COL18A1-204ENST00000400337 CABYRO75952 493 aa18.5■□□□□ 0.55
COL18A1-204ENST00000400337 CYP2C18P33260 490 aa18.5■□□□□ 0.55
COL18A1-204ENST00000400337 MARSP56192 900 aaKnown RBP18.5■□□□□ 0.55
COL18A1-204ENST00000400337 PPM1LQ5SGD2 360 aa18.5■□□□□ 0.55
COL18A1-204ENST00000400337 MILR1Q7Z6M3 343 aa18.5■□□□□ 0.55
COL18A1-204ENST00000400337 TRIM69Q86WT6 500 aa18.5■□□□□ 0.55
COL18A1-204ENST00000400337 INPP4AQ96PE3 977 aaPredicted RBP18.5■□□□□ 0.55
COL18A1-204ENST00000400337 hCG_1818297A0A087WSY0 165 aa18.5■□□□□ 0.55
COL18A1-204ENST00000400337 SAC3D1A6NKF1 404 aa18.5■□□□□ 0.55
COL18A1-204ENST00000400337 OR56A5P0C7T3 313 aa18.5■□□□□ 0.55
COL18A1-204ENST00000400337 GOT1P17174 413 aa18.5■□□□□ 0.55
COL18A1-204ENST00000400337 NFKB1P19838 968 aa18.5■□□□□ 0.55
COL18A1-204ENST00000400337 CD86P42081 329 aa18.5■□□□□ 0.55
COL18A1-204ENST00000400337 PCBP1Q15365 356 aaKnown RBP eCLIP18.5■□□□□ 0.554e-7■■■□□ 15
COL18A1-204ENST00000400337 FOXR2Q6PJQ5 311 aa18.5■□□□□ 0.55
COL18A1-204ENST00000400337 HOMEZQ8IX15 550 aa18.5■□□□□ 0.55
COL18A1-204ENST00000400337 MYLPFQ96A32 169 aa18.5■□□□□ 0.55
COL18A1-204ENST00000400337 CCDC167Q9P0B6 97 aa18.5■□□□□ 0.55
COL18A1-204ENST00000400337 ST3GAL5Q9UNP4 418 aa18.5■□□□□ 0.55
COL18A1-204ENST00000400337 OPLAHO14841 1288 aa18.49■□□□□ 0.55
COL18A1-204ENST00000400337 BUD23O43709 281 aaKnown RBP18.49■□□□□ 0.55
COL18A1-204ENST00000400337 PIGNO95427 931 aa18.49■□□□□ 0.55
COL18A1-204ENST00000400337 CHKAP35790 457 aa18.49■□□□□ 0.55
COL18A1-204ENST00000400337 KCTD19Q17RG1 926 aaPredicted RBP18.49■□□□□ 0.55
COL18A1-204ENST00000400337 SNX32Q86XE0 403 aa18.49■□□□□ 0.55
COL18A1-204ENST00000400337 KIAA2013Q8IYS2 634 aa18.49■□□□□ 0.55
COL18A1-204ENST00000400337 PWWP2AQ96N64 755 aa18.49■□□□□ 0.55
COL18A1-204ENST00000400337 PRDM12Q9H4Q4 367 aa18.49■□□□□ 0.55
COL18A1-204ENST00000400337 SEC22BO75396 215 aa18.49■□□□□ 0.55
COL18A1-204ENST00000400337 SMNDC1O75940 238 aaKnown RBP eCLIP18.49■□□□□ 0.551e-6■■■■□ 23.3
COL18A1-204ENST00000400337 CCNE2O96020 404 aa18.49■□□□□ 0.55
COL18A1-204ENST00000400337 ITGAVP06756 1048 aa18.49■□□□□ 0.55
COL18A1-204ENST00000400337 CENPAP49450 140 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms