RNA–Protein interactions for RNA: ENST00000400301.5

USP48-204, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 4,309 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-204ENST00000400301 TSTA3Q13630 321 aaPredicted RBP18.92■□□□□ 0.62
USP48-204ENST00000400301 PCBP1Q15365 356 aaKnown RBP eCLIP18.92■□□□□ 0.62
USP48-204ENST00000400301 RBBP7Q16576 425 aa18.92■□□□□ 0.62
USP48-204ENST00000400301 SCARA3Q6AZY7 606 aa18.92■□□□□ 0.62
USP48-204ENST00000400301 LCA5Q86VQ0 697 aa18.92■□□□□ 0.62
USP48-204ENST00000400301 WDTC1Q8N5D0 677 aa18.92■□□□□ 0.62
USP48-204ENST00000400301 PHF21BQ96EK2 531 aa18.92■□□□□ 0.62
USP48-204ENST00000400301 QKIQ96PU8 341 aaKnown RBP eCLIP18.92■□□□□ 0.622e-10■■■■□ 22.6
USP48-204ENST00000400301 SNX15Q9NRS6 342 aa18.92■□□□□ 0.62
USP48-204ENST00000400301 ZNF180Q9UJW8 692 aa18.92■□□□□ 0.62
USP48-204ENST00000400301 SUPT3HB4E1H0 165 aa18.92■□□□□ 0.62
USP48-204ENST00000400301 AKAP10O43572 662 aa18.92■□□□□ 0.62
USP48-204ENST00000400301 SUPT3HO75486 399 aa18.92■□□□□ 0.62
USP48-204ENST00000400301 ZMPSTE24O75844 475 aa18.92■□□□□ 0.62
USP48-204ENST00000400301 METTL18O95568 372 aa18.92■□□□□ 0.62
USP48-204ENST00000400301 IL10P22301 178 aa18.92■□□□□ 0.62
USP48-204ENST00000400301 TTC30AQ86WT1 665 aa18.92■□□□□ 0.62
USP48-204ENST00000400301 EGFL8Q99944 293 aa18.92■□□□□ 0.62
USP48-204ENST00000400301 ARHGEF4Q9NR80 690 aa18.92■□□□□ 0.62
USP48-204ENST00000400301 WFS1O76024 890 aa18.91■□□□□ 0.62
USP48-204ENST00000400301 LMO2P25791 158 aa18.91■□□□□ 0.62
USP48-204ENST00000400301 CACNA2D1P54289 1103 aa18.91■□□□□ 0.62
USP48-204ENST00000400301 SNX17Q15036 470 aa18.91■□□□□ 0.62
USP48-204ENST00000400301 RELL1Q8IUW5 271 aa18.91■□□□□ 0.62
USP48-204ENST00000400301 DCAKDQ8WVC6 231 aa18.91■□□□□ 0.62
USP48-204ENST00000400301 ZNF184Q99676 751 aaPredicted RBP18.91■□□□□ 0.62
USP48-204ENST00000400301 STRCQ7RTU9 1775 aa18.91■□□□□ 0.62
USP48-204ENST00000400301 TGDSO95455 350 aa18.91■□□□□ 0.62
USP48-204ENST00000400301 LPPQ93052 612 aa18.91■□□□□ 0.62
USP48-204ENST00000400301 FBXO32Q969P5 355 aa18.91■□□□□ 0.62
USP48-204ENST00000400301 CCDC126Q96EE4 140 aa18.91■□□□□ 0.62
USP48-204ENST00000400301 PNPOQ9NVS9 261 aa18.91■□□□□ 0.62
USP48-204ENST00000400301 SERPINA6P08185 405 aa18.91■□□□□ 0.62
USP48-204ENST00000400301 GHRHRQ02643 423 aa18.91■□□□□ 0.62
USP48-204ENST00000400301 LAMB3Q13751 1172 aa18.91■□□□□ 0.62
USP48-204ENST00000400301 SPDYAQ5MJ70 313 aa18.91■□□□□ 0.62
USP48-204ENST00000400301 MARC1Q5VT66 337 aa18.91■□□□□ 0.62
USP48-204ENST00000400301 LRRC8BQ6P9F7 803 aa18.91■□□□□ 0.62
USP48-204ENST00000400301 RIPOR1Q6ZS17 1223 aa18.91■□□□□ 0.62
USP48-204ENST00000400301 ULK4Q96C45 1275 aa18.91■□□□□ 0.62
USP48-204ENST00000400301 ZFP42Q96MM3 310 aa18.91■□□□□ 0.62
USP48-204ENST00000400301 TBL1YQ9BQ87 522 aa18.91■□□□□ 0.62
USP48-204ENST00000400301 NDFIP2Q9NV92 336 aa18.91■□□□□ 0.62
USP48-204ENST00000400301 HBS1LQ9Y450 684 aaKnown RBP18.91■□□□□ 0.62
USP48-204ENST00000400301 IPPQ9Y573 584 aa18.91■□□□□ 0.62
USP48-204ENST00000400301 SHANK3Q9BYB0 1731 aa18.91■□□□□ 0.62
USP48-204ENST00000400301 UGT1A9O60656 530 aa18.91■□□□□ 0.62
USP48-204ENST00000400301 GCATO75600 419 aa18.91■□□□□ 0.62
USP48-204ENST00000400301 RHOBTB1O94844 696 aa18.91■□□□□ 0.62
USP48-204ENST00000400301 CSH1P0DML2 217 aa18.91■□□□□ 0.62
USP48-204ENST00000400301 CSH2P0DML3 217 aa18.91■□□□□ 0.62
USP48-204ENST00000400301 CDH5P33151 784 aaPredicted RBP18.91■□□□□ 0.62
USP48-204ENST00000400301 CLDN10P78369 228 aa18.91■□□□□ 0.62
USP48-204ENST00000400301 MRNIPQ6NTE8 343 aa18.91■□□□□ 0.62
USP48-204ENST00000400301 KLHL4Q9C0H6 718 aa18.91■□□□□ 0.62
USP48-204ENST00000400301 UGT1A7Q9HAW7 530 aa18.91■□□□□ 0.62
USP48-204ENST00000400301 UGT1A10Q9HAW8 530 aa18.91■□□□□ 0.62
USP48-204ENST00000400301 UGT1A8Q9HAW9 530 aa18.91■□□□□ 0.62
USP48-204ENST00000400301 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.91■□□□□ 0.62
USP48-204ENST00000400301 SLC4A7Q9Y6M7 1214 aa18.91■□□□□ 0.62
USP48-204ENST00000400301 MLNP12872 115 aa18.9■□□□□ 0.62
USP48-204ENST00000400301 ARHGAP1Q07960 439 aa18.9■□□□□ 0.62
USP48-204ENST00000400301 NUP93Q8N1F7 819 aa18.9■□□□□ 0.62
USP48-204ENST00000400301 DTLQ9NZJ0 730 aa18.9■□□□□ 0.62
USP48-204ENST00000400301 PLK1P53350 603 aa18.9■□□□□ 0.62
USP48-204ENST00000400301 CXCL17Q6UXB2 119 aa18.9■□□□□ 0.62
USP48-204ENST00000400301 TTC7BQ86TV6 843 aa18.9■□□□□ 0.62
USP48-204ENST00000400301 LZTR1Q8N653 840 aa18.9■□□□□ 0.62
USP48-204ENST00000400301 TRPV2Q9Y5S1 764 aa18.9■□□□□ 0.62
USP48-204ENST00000400301 KAT6AQ92794 2004 aa18.9■□□□□ 0.62
USP48-204ENST00000400301 RBP1P09455 135 aa18.9■□□□□ 0.62
USP48-204ENST00000400301 SLC18A1P54219 525 aa18.9■□□□□ 0.62
USP48-204ENST00000400301 PTK2BQ14289 1009 aa18.9■□□□□ 0.62
USP48-204ENST00000400301 SPRED3Q2MJR0 410 aa18.9■□□□□ 0.62
USP48-204ENST00000400301 FAM35AQ86V20 835 aa18.9■□□□□ 0.62
USP48-204ENST00000400301 TOP6BLQ8N6T0 577 aa18.9■□□□□ 0.62
USP48-204ENST00000400301 MIEF2Q96C03 454 aa18.9■□□□□ 0.62
USP48-204ENST00000400301 FAR2Q96K12 515 aa18.9■□□□□ 0.62
USP48-204ENST00000400301 SNX27Q96L92 541 aa18.9■□□□□ 0.62
USP48-204ENST00000400301 C7orf26Q96N11 449 aa18.9■□□□□ 0.62
USP48-204ENST00000400301 MTG1Q9BT17 334 aaPredicted RBP18.9■□□□□ 0.62
USP48-204ENST00000400301 TBC1D13Q9NVG8 400 aa18.9■□□□□ 0.62
USP48-204ENST00000400301 SLC15A5A6NIM6 579 aa18.89■□□□□ 0.62
USP48-204ENST00000400301 USP4Q13107 963 aa18.89■□□□□ 0.62
USP48-204ENST00000400301 CERCAMQ5T4B2 595 aa18.89■□□□□ 0.62
USP48-204ENST00000400301 IRGCQ6NXR0 463 aa18.89■□□□□ 0.62
USP48-204ENST00000400301 CEP70Q8NHQ1 597 aa18.89■□□□□ 0.62
USP48-204ENST00000400301 CDC26Q8NHZ8 85 aa18.89■□□□□ 0.62
USP48-204ENST00000400301 CCDC138Q96M89 665 aa18.89■□□□□ 0.62
USP48-204ENST00000400301 ACE2Q9BYF1 805 aaPredicted RBP18.89■□□□□ 0.62
USP48-204ENST00000400301 CAB39LQ9H9S4 337 aa18.89■□□□□ 0.62
USP48-204ENST00000400301 ADAM28Q9UKQ2 775 aa18.89■□□□□ 0.62
USP48-204ENST00000400301 PACSIN3Q9UKS6 424 aa18.89■□□□□ 0.62
USP48-204ENST00000400301 SMIM35A0A1B0GVV1 85 aa18.89■□□□□ 0.61
USP48-204ENST00000400301 PPEF2O14830 753 aa18.89■□□□□ 0.61
USP48-204ENST00000400301 ATP6V1B1P15313 513 aa18.89■□□□□ 0.61
USP48-204ENST00000400301 ZNF135P52742 658 aaPredicted RBP18.89■□□□□ 0.61
USP48-204ENST00000400301 AGKQ53H12 422 aa18.89■□□□□ 0.61
USP48-204ENST00000400301 PPM1JQ5JR12 505 aa18.89■□□□□ 0.61
USP48-204ENST00000400301 ULK2Q8IYT8 1036 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms