RNA–Protein interactions for RNA: ENST00000399603.5

CACNA1C-209, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-209ENST00000399603 SRBD1Q8N5C6 995 aaKnown RBP12.72□□□□□ -0.37
CACNA1C-209ENST00000399603 HDAC2Q92769 488 aaKnown RBP12.72□□□□□ -0.37
CACNA1C-209ENST00000399603 GPAMQ9HCL2 828 aa12.72□□□□□ -0.37
CACNA1C-209ENST00000399603 SLC12A4Q9UP95 1085 aa12.72□□□□□ -0.37
CACNA1C-209ENST00000399603 ZNF609O15014 1411 aa12.72□□□□□ -0.37
CACNA1C-209ENST00000399603 LOC110117498-PIK3R3F6TDL0 507 aa12.72□□□□□ -0.37
CACNA1C-209ENST00000399603 APOL3O95236 402 aa12.72□□□□□ -0.37
CACNA1C-209ENST00000399603 ANXA6P08133 673 aa12.72□□□□□ -0.37
CACNA1C-209ENST00000399603 PTPN4P29074 926 aa12.72□□□□□ -0.37
CACNA1C-209ENST00000399603 NPY2RP49146 381 aa12.72□□□□□ -0.37
CACNA1C-209ENST00000399603 HMGCS2P54868 508 aa12.72□□□□□ -0.37
CACNA1C-209ENST00000399603 FASTKQ14296 549 aaKnown RBP12.72□□□□□ -0.37
CACNA1C-209ENST00000399603 ANKRD26P1Q6NSI1 321 aa12.72□□□□□ -0.37
CACNA1C-209ENST00000399603 FMR1NBQ8N0W7 255 aaPredicted RBP12.72□□□□□ -0.37
CACNA1C-209ENST00000399603 SPERTQ8NA61 448 aa12.72□□□□□ -0.37
CACNA1C-209ENST00000399603 SETD6Q8TBK2 473 aa12.72□□□□□ -0.37
CACNA1C-209ENST00000399603 PYDC1Q8WXC3 89 aa12.72□□□□□ -0.37
CACNA1C-209ENST00000399603 A1CFQ9NQ94 594 aaKnown RBP12.72□□□□□ -0.37
CACNA1C-209ENST00000399603 IFRD1O00458 451 aaPredicted RBP12.71□□□□□ -0.37
CACNA1C-209ENST00000399603 FSHRP23945 695 aa12.71□□□□□ -0.37
CACNA1C-209ENST00000399603 SKIV2L2P42285 1042 aaKnown RBP12.71□□□□□ -0.37
CACNA1C-209ENST00000399603 MC1RQ01726 317 aa12.71□□□□□ -0.37
CACNA1C-209ENST00000399603 GALNT3Q14435 633 aa12.71□□□□□ -0.37
CACNA1C-209ENST00000399603 KCNB1Q14721 858 aa12.71□□□□□ -0.37
CACNA1C-209ENST00000399603 TCEA2Q15560 299 aa12.71□□□□□ -0.37
CACNA1C-209ENST00000399603 GOLGA7BQ2TAP0 167 aa12.71□□□□□ -0.37
CACNA1C-209ENST00000399603 FBXO36Q8NEA4 188 aa12.71□□□□□ -0.37
CACNA1C-209ENST00000399603 TP53INP1Q96A56 240 aa12.71□□□□□ -0.37
CACNA1C-209ENST00000399603 PPP1R2P1Q96PQ5 205 aa12.71□□□□□ -0.37
CACNA1C-209ENST00000399603 CLN6Q9NWW5 311 aa12.71□□□□□ -0.37
CACNA1C-209ENST00000399603 ENOPH1Q9UHY7 261 aa12.71□□□□□ -0.37
CACNA1C-209ENST00000399603 A0A1W2PQ72 361 aa12.71□□□□□ -0.37
CACNA1C-209ENST00000399603 MNDAP41218 407 aa12.71□□□□□ -0.37
CACNA1C-209ENST00000399603 IL18Q14116 193 aa12.71□□□□□ -0.37
CACNA1C-209ENST00000399603 PCNX4Q63HM2 1172 aa12.71□□□□□ -0.37
CACNA1C-209ENST00000399603 GFM1Q96RP9 751 aaKnown RBP12.71□□□□□ -0.37
CACNA1C-209ENST00000399603 C9orf16Q9BUW7 83 aa12.71□□□□□ -0.37
CACNA1C-209ENST00000399603 DNAJC5Q9H3Z4 198 aa12.71□□□□□ -0.37
CACNA1C-209ENST00000399603 INVSQ9Y283 1065 aa12.71□□□□□ -0.37
CACNA1C-209ENST00000399603 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.71□□□□□ -0.37
CACNA1C-209ENST00000399603 MTA2O94776 668 aa12.71□□□□□ -0.37
CACNA1C-209ENST00000399603 BMP10O95393 424 aa12.71□□□□□ -0.37
CACNA1C-209ENST00000399603 METTL18O95568 372 aa12.71□□□□□ -0.37
CACNA1C-209ENST00000399603 C9P02748 559 aa12.71□□□□□ -0.37
CACNA1C-209ENST00000399603 ZNF177Q13360 481 aaPredicted RBP12.71□□□□□ -0.37
CACNA1C-209ENST00000399603 GPR107Q5VW38 600 aa12.71□□□□□ -0.37
CACNA1C-209ENST00000399603 PRAMEF18Q5VWM3 479 aa12.71□□□□□ -0.37
CACNA1C-209ENST00000399603 CYP20A1Q6UW02 462 aa12.71□□□□□ -0.37
CACNA1C-209ENST00000399603 FAM126BQ8IXS8 530 aa12.71□□□□□ -0.37
CACNA1C-209ENST00000399603 CARNMT1Q8N4J0 409 aa12.71□□□□□ -0.37
CACNA1C-209ENST00000399603 MYCBPAPQ8TBZ2 947 aa12.71□□□□□ -0.37
CACNA1C-209ENST00000399603 ERP44Q9BS26 406 aa12.71□□□□□ -0.37
CACNA1C-209ENST00000399603 TDRD1Q9BXT4 1180 aaKnown RBP12.71□□□□□ -0.37
CACNA1C-209ENST00000399603 ZNF350Q9GZX5 532 aa12.71□□□□□ -0.37
CACNA1C-209ENST00000399603 SP140LQ9H930 580 aa12.71□□□□□ -0.37
CACNA1C-209ENST00000399603 RGS17Q9UGC6 210 aaPredicted RBP12.71□□□□□ -0.37
CACNA1C-209ENST00000399603 RGSL1A5PLK6 1076 aa12.71□□□□□ -0.38
CACNA1C-209ENST00000399603 USP12O75317 370 aa12.71□□□□□ -0.38
CACNA1C-209ENST00000399603 SERPINA1P01009 418 aa12.71□□□□□ -0.38
CACNA1C-209ENST00000399603 PRKCBP05771 671 aa12.71□□□□□ -0.38
CACNA1C-209ENST00000399603 ATF6P18850 670 aa12.71□□□□□ -0.38
CACNA1C-209ENST00000399603 OR1G1P47890 313 aa12.71□□□□□ -0.38
CACNA1C-209ENST00000399603 ALDH1A3P47895 512 aa12.71□□□□□ -0.38
CACNA1C-209ENST00000399603 BNIP2Q12982 314 aa12.71□□□□□ -0.38
CACNA1C-209ENST00000399603 GNA13Q14344 377 aa12.71□□□□□ -0.38
CACNA1C-209ENST00000399603 MYBPC3Q14896 1274 aa12.71□□□□□ -0.38
CACNA1C-209ENST00000399603 TRMT5Q32P41 509 aaKnown RBP12.71□□□□□ -0.38
CACNA1C-209ENST00000399603 INO80DQ53TQ3 878 aaPredicted RBP12.71□□□□□ -0.38
CACNA1C-209ENST00000399603 C11orf63Q6NUN7 778 aa12.71□□□□□ -0.38
CACNA1C-209ENST00000399603 SHC4Q6S5L8 630 aa12.71□□□□□ -0.38
CACNA1C-209ENST00000399603 CIR1Q86X95 450 aaPredicted RBP12.71□□□□□ -0.38
CACNA1C-209ENST00000399603 CDH9Q9ULB4 789 aa12.71□□□□□ -0.38
CACNA1C-209ENST00000399603 CHD1O14646 1710 aa12.71□□□□□ -0.38
CACNA1C-209ENST00000399603 TRIM38O00635 465 aa12.71□□□□□ -0.38
CACNA1C-209ENST00000399603 DCLK1O15075 740 aa12.71□□□□□ -0.38
CACNA1C-209ENST00000399603 ANXA9O76027 345 aa12.71□□□□□ -0.38
CACNA1C-209ENST00000399603 FARP2O94887 1054 aaPredicted RBP12.71□□□□□ -0.38
CACNA1C-209ENST00000399603 H2AFXP16104 143 aaPredicted RBP12.71□□□□□ -0.38
CACNA1C-209ENST00000399603 GPD1P21695 349 aa12.71□□□□□ -0.38
CACNA1C-209ENST00000399603 PKNOX1P55347 436 aa12.71□□□□□ -0.38
CACNA1C-209ENST00000399603 OXCT1P55809 520 aa12.71□□□□□ -0.38
CACNA1C-209ENST00000399603 ELMO1Q92556 727 aa12.71□□□□□ -0.38
CACNA1C-209ENST00000399603 RUBCNQ92622 972 aa12.71□□□□□ -0.38
CACNA1C-209ENST00000399603 TOP1MTQ969P6 601 aa12.71□□□□□ -0.38
CACNA1C-209ENST00000399603 RSAD1Q9HA92 442 aa12.71□□□□□ -0.38
CACNA1C-209ENST00000399603 GPN1Q9HCN4 374 aaPredicted RBP12.71□□□□□ -0.38
CACNA1C-209ENST00000399603 CLIC5Q9NZA1 410 aa12.71□□□□□ -0.38
CACNA1C-209ENST00000399603 M0R036 132 aa12.71□□□□□ -0.38
CACNA1C-209ENST00000399603 HOXD10P28358 340 aa12.71□□□□□ -0.38
CACNA1C-209ENST00000399603 CRATP43155 626 aa12.71□□□□□ -0.38
CACNA1C-209ENST00000399603 NCOA4Q13772 614 aa12.71□□□□□ -0.38
CACNA1C-209ENST00000399603 TMEM132DQ14C87 1099 aa12.71□□□□□ -0.38
CACNA1C-209ENST00000399603 AGMOQ6ZNB7 445 aa12.71□□□□□ -0.38
CACNA1C-209ENST00000399603 HAUS6Q7Z4H7 955 aa12.71□□□□□ -0.38
CACNA1C-209ENST00000399603 SGMS1Q86VZ5 419 aa12.71□□□□□ -0.38
CACNA1C-209ENST00000399603 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.71□□□□□ -0.38
CACNA1C-209ENST00000399603 ZZZ3Q8IYH5 903 aa12.71□□□□□ -0.38
CACNA1C-209ENST00000399603 OR2L3Q8NG85 312 aa12.71□□□□□ -0.38
CACNA1C-209ENST00000399603 KCTD4Q8WVF5 259 aa12.71□□□□□ -0.38
CACNA1C-209ENST00000399603 CHIAQ9BZP6 476 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms