RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 FGFR3P22607 806 aa14.29□□□□□ -0.12
APOB-202ENST00000399256 GP5P40197 560 aa14.29□□□□□ -0.12
APOB-202ENST00000399256 GARSP41250 739 aaKnown RBP14.29□□□□□ -0.12
APOB-202ENST00000399256 NDST1P52848 882 aa14.29□□□□□ -0.12
APOB-202ENST00000399256 LPIN1Q14693 890 aa14.29□□□□□ -0.12
APOB-202ENST00000399256 USP41Q3LFD5 358 aa14.29□□□□□ -0.12
APOB-202ENST00000399256 METTL21CQ5VZV1 264 aa14.29□□□□□ -0.12
APOB-202ENST00000399256 KLHL35Q6PF15 583 aa14.29□□□□□ -0.12
APOB-202ENST00000399256 FAM83AQ86UY5 434 aa14.29□□□□□ -0.12
APOB-202ENST00000399256 ZBTB8OSQ8IWT0 167 aa14.29□□□□□ -0.12
APOB-202ENST00000399256 DIS3LQ8TF46 1054 aaKnown RBP14.29□□□□□ -0.12
APOB-202ENST00000399256 PDCD6IPQ8WUM4 868 aaKnown RBP14.29□□□□□ -0.12
APOB-202ENST00000399256 HTR3CQ8WXA8 447 aa14.29□□□□□ -0.12
APOB-202ENST00000399256 TMA16Q96EY4 203 aaKnown RBP14.29□□□□□ -0.12
APOB-202ENST00000399256 NUF2Q9BZD4 464 aa14.29□□□□□ -0.12
APOB-202ENST00000399256 NRBP2Q9NSY0 501 aa14.29□□□□□ -0.12
APOB-202ENST00000399256 SEPT10Q9P0V9 454 aa14.29□□□□□ -0.12
APOB-202ENST00000399256 RSL24D1Q9UHA3 163 aaKnown RBP14.29□□□□□ -0.12
APOB-202ENST00000399256 AFG3L2Q9Y4W6 797 aa14.29□□□□□ -0.12
APOB-202ENST00000399256 INO80B-WBP1J3KQ70 363 aa14.28□□□□□ -0.12
APOB-202ENST00000399256 WNT10BO00744 389 aa14.28□□□□□ -0.12
APOB-202ENST00000399256 PFKMP08237 780 aa14.28□□□□□ -0.12
APOB-202ENST00000399256 ME2P23368 584 aa14.28□□□□□ -0.12
APOB-202ENST00000399256 GMPSP49915 693 aaPredicted RBP14.28□□□□□ -0.12
APOB-202ENST00000399256 GOLGA7BQ2TAP0 167 aa14.28□□□□□ -0.12
APOB-202ENST00000399256 ATF7IP2Q5U623 682 aa14.28□□□□□ -0.12
APOB-202ENST00000399256 JADE1Q6IE81 842 aa14.28□□□□□ -0.12
APOB-202ENST00000399256 LRRC8BQ6P9F7 803 aa14.28□□□□□ -0.12
APOB-202ENST00000399256 EME1Q96AY2 570 aa14.28□□□□□ -0.12
APOB-202ENST00000399256 AGAP3Q96P47 875 aa14.28□□□□□ -0.12
APOB-202ENST00000399256 GATA5Q9BWX5 397 aaPredicted RBP14.28□□□□□ -0.12
APOB-202ENST00000399256 B3GNT5Q9BYG0 378 aa14.28□□□□□ -0.12
APOB-202ENST00000399256 SLC2A11Q9BYW1 496 aa14.28□□□□□ -0.12
APOB-202ENST00000399256 INO80BQ9C086 356 aaPredicted RBP14.28□□□□□ -0.12
APOB-202ENST00000399256 RPF1Q9H9Y2 349 aaKnown RBP14.28□□□□□ -0.12
APOB-202ENST00000399256 FAM49BQ9NUQ9 324 aa14.28□□□□□ -0.12
APOB-202ENST00000399256 DTLQ9NZJ0 730 aa14.28□□□□□ -0.12
APOB-202ENST00000399256 THEGQ9P2T0 379 aa14.28□□□□□ -0.12
APOB-202ENST00000399256 MORF4L1Q9UBU8 362 aa14.28□□□□□ -0.12
APOB-202ENST00000399256 MAGED2Q9UNF1 606 aaPredicted RBP14.28□□□□□ -0.12
APOB-202ENST00000399256 TDRKHQ9Y2W6 561 aaKnown RBP14.28□□□□□ -0.12
APOB-202ENST00000399256 RNF11Q9Y3C5 154 aa14.28□□□□□ -0.12
APOB-202ENST00000399256 GPR25O00155 361 aa14.28□□□□□ -0.12
APOB-202ENST00000399256 MAFO75444 373 aaPredicted RBP14.28□□□□□ -0.12
APOB-202ENST00000399256 HSPA13P48723 471 aa14.28□□□□□ -0.12
APOB-202ENST00000399256 NUMBP49757 651 aa14.28□□□□□ -0.12
APOB-202ENST00000399256 ART3Q13508 389 aa14.28□□□□□ -0.12
APOB-202ENST00000399256 PMF1Q6P1K2 205 aa14.28□□□□□ -0.12
APOB-202ENST00000399256 BORAQ6PGQ7 559 aa14.28□□□□□ -0.12
APOB-202ENST00000399256 OLFML1Q6UWY5 402 aa14.28□□□□□ -0.12
APOB-202ENST00000399256 NUP93Q8N1F7 819 aa14.28□□□□□ -0.12
APOB-202ENST00000399256 TMEM102Q8N9M5 508 aaPredicted RBP14.28□□□□□ -0.12
APOB-202ENST00000399256 RP9Q8TA86 221 aaKnown RBP14.28□□□□□ -0.12
APOB-202ENST00000399256 IRGQQ8WZA9 623 aa14.28□□□□□ -0.12
APOB-202ENST00000399256 ATP6V1E2Q96A05 226 aa14.28□□□□□ -0.12
APOB-202ENST00000399256 CERS2Q96G23 380 aa14.28□□□□□ -0.12
APOB-202ENST00000399256 NPAS2Q99743 824 aa14.28□□□□□ -0.12
APOB-202ENST00000399256 GJA3Q9Y6H8 435 aa14.28□□□□□ -0.12
APOB-202ENST00000399256 MGAMO43451 1857 aa14.28□□□□□ -0.12
APOB-202ENST00000399256 A0A096LPK6 155 aa14.28□□□□□ -0.12
APOB-202ENST00000399256 A0A0A0MRY4 1105 aa14.28□□□□□ -0.12
APOB-202ENST00000399256 CSPG5O95196 566 aa14.28□□□□□ -0.12
APOB-202ENST00000399256 CCDC130P13994 396 aa14.28□□□□□ -0.12
APOB-202ENST00000399256 STAT5BP51692 787 aa14.28□□□□□ -0.12
APOB-202ENST00000399256 SULT2A1Q06520 285 aa14.28□□□□□ -0.12
APOB-202ENST00000399256 IL23RQ5VWK5 629 aa14.28□□□□□ -0.12
APOB-202ENST00000399256 STRA8Q7Z7C7 330 aa14.28□□□□□ -0.12
APOB-202ENST00000399256 TMEM126BQ8IUX1 230 aa14.28□□□□□ -0.12
APOB-202ENST00000399256 SPATA13Q96N96 652 aa14.28□□□□□ -0.12
APOB-202ENST00000399256 FCRL3Q96P31 734 aaPredicted RBP14.28□□□□□ -0.12
APOB-202ENST00000399256 AGAP2Q99490 1192 aa14.28□□□□□ -0.12
APOB-202ENST00000399256 CAAP1Q9H8G2 361 aa14.28□□□□□ -0.12
APOB-202ENST00000399256 C7orf72A4D263 438 aa14.27□□□□□ -0.12
APOB-202ENST00000399256 LACTBL1A8MY62 500 aa14.27□□□□□ -0.12
APOB-202ENST00000399256 MDM4O15151 490 aa14.27□□□□□ -0.12
APOB-202ENST00000399256 TRIM13O60858 407 aa14.27□□□□□ -0.12
APOB-202ENST00000399256 EGFRP00533 1210 aa14.27□□□□□ -0.12
APOB-202ENST00000399256 PSMB4P28070 264 aa14.27□□□□□ -0.12
APOB-202ENST00000399256 PGGT1BP53609 377 aa14.27□□□□□ -0.12
APOB-202ENST00000399256 LPCAT2Q7L5N7 544 aa14.27□□□□□ -0.12
APOB-202ENST00000399256 PGAM4Q8N0Y7 254 aa14.27□□□□□ -0.12
APOB-202ENST00000399256 KCTD15Q96SI1 283 aaPredicted RBP14.27□□□□□ -0.12
APOB-202ENST00000399256 TBCBQ99426 244 aa14.27□□□□□ -0.12
APOB-202ENST00000399256 ILKAPQ9H0C8 392 aaPredicted RBP14.27□□□□□ -0.12
APOB-202ENST00000399256 EPS15L1Q9UBC2 864 aa14.27□□□□□ -0.12
APOB-202ENST00000399256 HESX1Q9UBX0 185 aa14.27□□□□□ -0.12
APOB-202ENST00000399256 BCAP29Q9UHQ4 241 aa14.27□□□□□ -0.12
APOB-202ENST00000399256 PTPRFP10586 1907 aa14.27□□□□□ -0.12
APOB-202ENST00000399256 KPNA7A9QM74 516 aa14.27□□□□□ -0.13
APOB-202ENST00000399256 TMEM114B3SHH9 223 aa14.27□□□□□ -0.13
APOB-202ENST00000399256 BCAS2O75934 225 aaPredicted RBP14.27□□□□□ -0.13
APOB-202ENST00000399256 MLNP12872 115 aa14.27□□□□□ -0.13
APOB-202ENST00000399256 YBX3P16989 372 aaKnown RBP eCLIP14.27□□□□□ -0.131e-323■□□□□ 8.6
APOB-202ENST00000399256 STT3AP46977 705 aa14.27□□□□□ -0.13
APOB-202ENST00000399256 TMEM132BQ14DG7 1078 aa14.27□□□□□ -0.13
APOB-202ENST00000399256 MGAT5BQ3V5L5 792 aa14.27□□□□□ -0.13
APOB-202ENST00000399256 FKBP1CQ5VVH2 108 aa14.27□□□□□ -0.13
APOB-202ENST00000399256 SEL1L3Q68CR1 1132 aa14.27□□□□□ -0.13
APOB-202ENST00000399256 NCBP2-AS2Q69YL0 99 aa14.27□□□□□ -0.13
APOB-202ENST00000399256 FSTL4Q6MZW2 842 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms