RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 CCNIQ14094 377 aa26.16■■□□□ 1.78
COL13A1-203ENST00000398969 TNS4Q8IZW8 715 aa26.16■■□□□ 1.78
COL13A1-203ENST00000398969 GORASP1Q9BQQ3 440 aa26.16■■□□□ 1.78
COL13A1-203ENST00000398969 CDH22Q9UJ99 828 aa26.16■■□□□ 1.78
COL13A1-203ENST00000398969 KCNK1O00180 336 aa26.16■■□□□ 1.78
COL13A1-203ENST00000398969 SORBS2O94875 1100 aaKnown RBP26.16■■□□□ 1.78
COL13A1-203ENST00000398969 CD4P01730 458 aa26.16■■□□□ 1.78
COL13A1-203ENST00000398969 NCF2P19878 526 aaPredicted RBP26.16■■□□□ 1.78
COL13A1-203ENST00000398969 NOS2P35228 1153 aa26.16■■□□□ 1.78
COL13A1-203ENST00000398969 RNF111Q6ZNA4 994 aa26.16■■□□□ 1.78
COL13A1-203ENST00000398969 PHTF2Q8N3S3 785 aa26.16■■□□□ 1.78
COL13A1-203ENST00000398969 APPL2Q8NEU8 664 aa26.16■■□□□ 1.78
COL13A1-203ENST00000398969 ZNF669Q96BR6 464 aaPredicted RBP26.16■■□□□ 1.78
COL13A1-203ENST00000398969 ATXN7L3BQ96GX2 97 aa26.16■■□□□ 1.78
COL13A1-203ENST00000398969 TRAPPC9Q96Q05 1148 aa26.16■■□□□ 1.78
COL13A1-203ENST00000398969 OXCT2Q9BYC2 517 aaPredicted RBP26.16■■□□□ 1.78
COL13A1-203ENST00000398969 LRRC40Q9H9A6 602 aa26.16■■□□□ 1.78
COL13A1-203ENST00000398969 SETD4Q9NVD3 440 aa26.16■■□□□ 1.78
COL13A1-203ENST00000398969 M0QYT0 321 aa26.15■■□□□ 1.78
COL13A1-203ENST00000398969 EEF2KO00418 725 aaKnown RBP26.15■■□□□ 1.78
COL13A1-203ENST00000398969 DCLK1O15075 740 aa26.15■■□□□ 1.78
COL13A1-203ENST00000398969 SPRP35270 261 aaPredicted RBP26.15■■□□□ 1.78
COL13A1-203ENST00000398969 LIMK2P53671 638 aa26.15■■□□□ 1.78
COL13A1-203ENST00000398969 PAXIP1Q6ZW49 1069 aaPredicted RBP26.15■■□□□ 1.78
COL13A1-203ENST00000398969 STRA8Q7Z7C7 330 aa26.15■■□□□ 1.78
COL13A1-203ENST00000398969 ZNF560Q96MR9 790 aa26.15■■□□□ 1.78
COL13A1-203ENST00000398969 CYP4F11Q9HBI6 524 aa26.15■■□□□ 1.78
COL13A1-203ENST00000398969 KLHL8Q9P2G9 620 aaPredicted RBP26.15■■□□□ 1.78
COL13A1-203ENST00000398969 USP12O75317 370 aa26.14■■□□□ 1.78
COL13A1-203ENST00000398969 GPR32O75388 356 aa26.14■■□□□ 1.78
COL13A1-203ENST00000398969 GNAT1P11488 350 aa26.14■■□□□ 1.78
COL13A1-203ENST00000398969 ITGAXP20702 1163 aa26.14■■□□□ 1.78
COL13A1-203ENST00000398969 ZNF157P51786 506 aaPredicted RBP26.14■■□□□ 1.78
COL13A1-203ENST00000398969 IQSEC1Q6DN90 963 aa26.14■■□□□ 1.78
COL13A1-203ENST00000398969 FSTL4Q6MZW2 842 aa26.14■■□□□ 1.78
COL13A1-203ENST00000398969 SLC30A9Q6PML9 568 aa26.14■■□□□ 1.78
COL13A1-203ENST00000398969 RASAL3Q86YV0 1011 aa26.14■■□□□ 1.78
COL13A1-203ENST00000398969 SERBP1Q8NC51 408 aaKnown RBP eCLIP26.14■■□□□ 1.78
COL13A1-203ENST00000398969 COG4Q9H9E3 785 aa26.14■■□□□ 1.78
COL13A1-203ENST00000398969 CDY2AQ9Y6F7 541 aa26.14■■□□□ 1.78
COL13A1-203ENST00000398969 CDY1Q9Y6F8 540 aa26.14■■□□□ 1.78
COL13A1-203ENST00000398969 SMIM28A0A1B0GU29 152 aa26.14■■□□□ 1.77
COL13A1-203ENST00000398969 F7P08709 466 aaPredicted RBP26.14■■□□□ 1.77
COL13A1-203ENST00000398969 HOXD8P13378 290 aaPredicted RBP26.14■■□□□ 1.77
COL13A1-203ENST00000398969 USP4Q13107 963 aa26.14■■□□□ 1.77
COL13A1-203ENST00000398969 NME3Q13232 169 aa26.14■■□□□ 1.77
COL13A1-203ENST00000398969 SYPL2Q5VXT5 272 aa26.14■■□□□ 1.77
COL13A1-203ENST00000398969 FRMD7Q6ZUT3 714 aa26.14■■□□□ 1.77
COL13A1-203ENST00000398969 LIMS2Q7Z4I7 341 aa26.14■■□□□ 1.77
COL13A1-203ENST00000398969 ZNF781Q8N8C0 355 aa26.14■■□□□ 1.77
COL13A1-203ENST00000398969 SLC26A7Q8TE54 656 aa26.14■■□□□ 1.77
COL13A1-203ENST00000398969 PPP2R3CQ969Q6 453 aa26.14■■□□□ 1.77
COL13A1-203ENST00000398969 AZIN2Q96A70 460 aa26.14■■□□□ 1.77
COL13A1-203ENST00000398969 AGAP3Q96P47 875 aa26.14■■□□□ 1.77
COL13A1-203ENST00000398969 OSMRQ99650 979 aa26.14■■□□□ 1.77
COL13A1-203ENST00000398969 DDX50Q9BQ39 737 aaKnown RBP26.14■■□□□ 1.77
COL13A1-203ENST00000398969 DUSP16Q9BY84 665 aa26.14■■□□□ 1.77
COL13A1-203ENST00000398969 CDH19Q9H159 772 aa26.14■■□□□ 1.77
COL13A1-203ENST00000398969 KLK14Q9P0G3 267 aa26.14■■□□□ 1.77
COL13A1-203ENST00000398969 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP26.13■■□□□ 1.77
COL13A1-203ENST00000398969 G3V2L1 256 aa26.13■■□□□ 1.77
COL13A1-203ENST00000398969 MMP3P08254 477 aa26.13■■□□□ 1.77
COL13A1-203ENST00000398969 PTPN3P26045 913 aa26.13■■□□□ 1.77
COL13A1-203ENST00000398969 ASPHQ12797 758 aa26.13■■□□□ 1.77
COL13A1-203ENST00000398969 HNRNPDQ14103 355 aaKnown RBP26.13■■□□□ 1.77
COL13A1-203ENST00000398969 EPGNQ6UW88 154 aa26.13■■□□□ 1.77
COL13A1-203ENST00000398969 NAPRTQ6XQN6 538 aa26.13■■□□□ 1.77
COL13A1-203ENST00000398969 TMEM135Q86UB9 458 aa26.13■■□□□ 1.77
COL13A1-203ENST00000398969 DEFB107AQ8IZN7 70 aa26.13■■□□□ 1.77
COL13A1-203ENST00000398969 B3GALNT2Q8NCR0 500 aa26.13■■□□□ 1.77
COL13A1-203ENST00000398969 OR6J1Q8NGC5 347 aa26.13■■□□□ 1.77
COL13A1-203ENST00000398969 JADE3Q92613 823 aa26.13■■□□□ 1.77
COL13A1-203ENST00000398969 TNIP3Q96KP6 325 aa26.13■■□□□ 1.77
COL13A1-203ENST00000398969 AGAP2Q99490 1192 aa26.13■■□□□ 1.77
COL13A1-203ENST00000398969 PAPOLBQ9NRJ5 636 aaKnown RBP26.13■■□□□ 1.77
COL13A1-203ENST00000398969 PIGVQ9NUD9 493 aa26.13■■□□□ 1.77
COL13A1-203ENST00000398969 VANGL2Q9ULK5 521 aa26.13■■□□□ 1.77
COL13A1-203ENST00000398969 STAP1Q9ULZ2 295 aa26.13■■□□□ 1.77
COL13A1-203ENST00000398969 PDCD11Q14690 1871 aaKnown RBP26.13■■□□□ 1.77
COL13A1-203ENST00000398969 LOC100653049A0A140TA62 436 aa26.13■■□□□ 1.77
COL13A1-203ENST00000398969 ZCWPW2A0A1B0GU75 182 aa26.13■■□□□ 1.77
COL13A1-203ENST00000398969 DCXO43602 365 aa26.13■■□□□ 1.77
COL13A1-203ENST00000398969 KRT34O76011 436 aa26.13■■□□□ 1.77
COL13A1-203ENST00000398969 HSPA4LO95757 839 aa26.13■■□□□ 1.77
COL13A1-203ENST00000398969 AP2A1O95782 977 aa26.13■■□□□ 1.77
COL13A1-203ENST00000398969 TAF6P49848 677 aa26.13■■□□□ 1.77
COL13A1-203ENST00000398969 PEX6Q13608 980 aa26.13■■□□□ 1.77
COL13A1-203ENST00000398969 MORN1Q5T089 497 aa26.13■■□□□ 1.77
COL13A1-203ENST00000398969 EP400NLQ6ZTU2 488 aa26.13■■□□□ 1.77
COL13A1-203ENST00000398969 PDSS2Q86YH6 399 aa26.13■■□□□ 1.77
COL13A1-203ENST00000398969 CCDC124Q96CT7 223 aaKnown RBP26.13■■□□□ 1.77
COL13A1-203ENST00000398969 HNRNPABQ99729 332 aaKnown RBP26.13■■□□□ 1.77
COL13A1-203ENST00000398969 DNAI2Q9GZS0 605 aa26.13■■□□□ 1.77
COL13A1-203ENST00000398969 GOLGA2P5Q9HBQ8 144 aa26.13■■□□□ 1.77
COL13A1-203ENST00000398969 ZDHHC7Q9NXF8 308 aa26.13■■□□□ 1.77
COL13A1-203ENST00000398969 ZBTB14O43829 449 aa26.12■■□□□ 1.77
COL13A1-203ENST00000398969 BEST1O76090 585 aa26.12■■□□□ 1.77
COL13A1-203ENST00000398969 ZCCHC18P0CG32 403 aa26.12■■□□□ 1.77
COL13A1-203ENST00000398969 PNPLA4P41247 253 aa26.12■■□□□ 1.77
COL13A1-203ENST00000398969 NDUFV1P49821 464 aa26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms