RNA–Protein interactions for RNA: ENST00000398661.6

HMGCLL1-205, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-205ENST00000398661 HELQQ8TDG4 1101 aa10.37□□□□□ -0.75
HMGCLL1-205ENST00000398661 GPATCH1Q9BRR8 931 aaKnown RBP10.37□□□□□ -0.75
HMGCLL1-205ENST00000398661 PAIP1Q9H074 479 aaKnown RBP10.37□□□□□ -0.75
HMGCLL1-205ENST00000398661 RAB20Q9NX57 234 aa10.37□□□□□ -0.75
HMGCLL1-205ENST00000398661 RBAKQ9NYW8 714 aaPredicted RBP10.37□□□□□ -0.75
HMGCLL1-205ENST00000398661 RIMS3Q9UJD0 308 aa10.37□□□□□ -0.75
HMGCLL1-205ENST00000398661 APOBEC2Q9Y235 224 aaKnown RBP10.37□□□□□ -0.75
HMGCLL1-205ENST00000398661 TRIP11Q15643 1979 aa10.37□□□□□ -0.75
HMGCLL1-205ENST00000398661 NRCAMQ92823 1304 aa10.37□□□□□ -0.75
HMGCLL1-205ENST00000398661 LOXHD1Q8IVV2 1947 aa10.37□□□□□ -0.75
HMGCLL1-205ENST00000398661 CCDC162PA2VCL2 907 aa10.37□□□□□ -0.75
HMGCLL1-205ENST00000398661 SOBPA7XYQ1 873 aa10.37□□□□□ -0.75
HMGCLL1-205ENST00000398661 TRIM49D1C9J1S8 452 aa10.37□□□□□ -0.75
HMGCLL1-205ENST00000398661 XPO1O14980 1071 aaKnown RBP10.37□□□□□ -0.75
HMGCLL1-205ENST00000398661 SPTLC1O15269 473 aa10.37□□□□□ -0.75
HMGCLL1-205ENST00000398661 SIN3BO75182 1162 aa10.37□□□□□ -0.75
HMGCLL1-205ENST00000398661 OXSR1O95747 527 aaPredicted RBP10.37□□□□□ -0.75
HMGCLL1-205ENST00000398661 ACAT1P24752 427 aaKnown RBP10.37□□□□□ -0.75
HMGCLL1-205ENST00000398661 HOXA11P31270 313 aaPredicted RBP10.37□□□□□ -0.75
HMGCLL1-205ENST00000398661 THPOP40225 353 aa10.37□□□□□ -0.75
HMGCLL1-205ENST00000398661 ADAM17P78536 824 aa10.37□□□□□ -0.75
HMGCLL1-205ENST00000398661 ORC1Q13415 861 aa10.37□□□□□ -0.75
HMGCLL1-205ENST00000398661 TTC39BQ5VTQ0 682 aaPredicted RBP10.37□□□□□ -0.75
HMGCLL1-205ENST00000398661 RWDD4Q6NW29 188 aaKnown RBP10.37□□□□□ -0.75
HMGCLL1-205ENST00000398661 MFSD7Q6UXD7 560 aa10.37□□□□□ -0.75
HMGCLL1-205ENST00000398661 SV2AQ7L0J3 742 aa10.37□□□□□ -0.75
HMGCLL1-205ENST00000398661 ZBTB8OSQ8IWT0 167 aa10.37□□□□□ -0.75
HMGCLL1-205ENST00000398661 CENPSQ8N2Z9 138 aa10.37□□□□□ -0.75
HMGCLL1-205ENST00000398661 GALNT4Q8N4A0 578 aa10.37□□□□□ -0.75
HMGCLL1-205ENST00000398661 DNAJC5GQ8N7S2 189 aa10.37□□□□□ -0.75
HMGCLL1-205ENST00000398661 RNF169Q8NCN4 708 aa10.37□□□□□ -0.75
HMGCLL1-205ENST00000398661 DDHD1Q8NEL9 900 aa10.37□□□□□ -0.75
HMGCLL1-205ENST00000398661 TFB1MQ8WVM0 346 aaKnown RBP10.37□□□□□ -0.75
HMGCLL1-205ENST00000398661 NKD2Q969F2 451 aaPredicted RBP10.37□□□□□ -0.75
HMGCLL1-205ENST00000398661 CMTM5Q96DZ9 223 aa10.37□□□□□ -0.75
HMGCLL1-205ENST00000398661 DHRS1Q96LJ7 313 aa10.37□□□□□ -0.75
HMGCLL1-205ENST00000398661 ZNF512Q96ME7 567 aaPredicted RBP10.37□□□□□ -0.75
HMGCLL1-205ENST00000398661 MTMR12Q9C0I1 747 aa10.37□□□□□ -0.75
HMGCLL1-205ENST00000398661 ADAMTS10Q9H324 1103 aa10.37□□□□□ -0.75
HMGCLL1-205ENST00000398661 NXF3Q9H4D5 531 aaKnown RBP10.37□□□□□ -0.75
HMGCLL1-205ENST00000398661 ARMC7Q9H6L4 198 aa10.37□□□□□ -0.75
HMGCLL1-205ENST00000398661 XAB2Q9HCS7 855 aaKnown RBP10.37□□□□□ -0.75
HMGCLL1-205ENST00000398661 TRPC7Q9HCX4 862 aa10.37□□□□□ -0.75
HMGCLL1-205ENST00000398661 GPC6Q9Y625 555 aaPredicted RBP10.37□□□□□ -0.75
HMGCLL1-205ENST00000398661 SQORQ9Y6N5 450 aa10.37□□□□□ -0.75
HMGCLL1-205ENST00000398661 MYO7AQ13402 2215 aa10.36□□□□□ -0.75
HMGCLL1-205ENST00000398661 K7EPI3 171 aa10.36□□□□□ -0.75
HMGCLL1-205ENST00000398661 HAS3O00219 553 aa10.36□□□□□ -0.75
HMGCLL1-205ENST00000398661 FAM189A1O60320 539 aa10.36□□□□□ -0.75
HMGCLL1-205ENST00000398661 KRT1P04264 644 aa10.36□□□□□ -0.75
HMGCLL1-205ENST00000398661 KRT5P13647 590 aa10.36□□□□□ -0.75
HMGCLL1-205ENST00000398661 PSMC3P17980 439 aa10.36□□□□□ -0.75
HMGCLL1-205ENST00000398661 CDH3P22223 829 aa10.36□□□□□ -0.75
HMGCLL1-205ENST00000398661 ACLYP53396 1101 aa10.36□□□□□ -0.75
HMGCLL1-205ENST00000398661 MRPS5P82675 430 aaKnown RBP10.36□□□□□ -0.75
HMGCLL1-205ENST00000398661 TFAMQ00059 246 aaKnown RBP10.36□□□□□ -0.75
HMGCLL1-205ENST00000398661 CYP24A1Q07973 514 aa10.36□□□□□ -0.75
HMGCLL1-205ENST00000398661 PEX6Q13608 980 aa10.36□□□□□ -0.75
HMGCLL1-205ENST00000398661 ZNF829Q3KNS6 432 aaPredicted RBP10.36□□□□□ -0.75
HMGCLL1-205ENST00000398661 NIPAL1Q6NVV3 410 aa10.36□□□□□ -0.75
HMGCLL1-205ENST00000398661 CATSPER4Q7RTX7 472 aa10.36□□□□□ -0.75
HMGCLL1-205ENST00000398661 WDR75Q8IWA0 830 aaKnown RBP10.36□□□□□ -0.75
HMGCLL1-205ENST00000398661 GPD1LQ8N335 351 aa10.36□□□□□ -0.75
HMGCLL1-205ENST00000398661 HSPH1Q92598 858 aa10.36□□□□□ -0.75
HMGCLL1-205ENST00000398661 CDT1Q9H211 546 aa10.36□□□□□ -0.75
HMGCLL1-205ENST00000398661 ST6GALNAC4Q9H4F1 302 aa10.36□□□□□ -0.75
HMGCLL1-205ENST00000398661 AGO3Q9H9G7 860 aaKnown RBP10.36□□□□□ -0.75
HMGCLL1-205ENST00000398661 COPS7BQ9H9Q2 264 aaPredicted RBP10.36□□□□□ -0.75
HMGCLL1-205ENST00000398661 HMX1Q9NP08 348 aaPredicted RBP10.36□□□□□ -0.75
HMGCLL1-205ENST00000398661 TRNAU1APQ9NX07 287 aaKnown RBP10.36□□□□□ -0.75
HMGCLL1-205ENST00000398661 PIN4Q9Y237 131 aaKnown RBP10.36□□□□□ -0.75
HMGCLL1-205ENST00000398661 TRIOO75962 3097 aa10.36□□□□□ -0.75
HMGCLL1-205ENST00000398661 TCRBV7S3A2A0A539 114 aa10.36□□□□□ -0.75
HMGCLL1-205ENST00000398661 TCRBV9S1A1TA0A576 114 aa10.36□□□□□ -0.75
HMGCLL1-205ENST00000398661 PMM2O15305 246 aa10.36□□□□□ -0.75
HMGCLL1-205ENST00000398661 FOXD2O60548 495 aaPredicted RBP10.36□□□□□ -0.75
HMGCLL1-205ENST00000398661 TSPAN1O60635 241 aa10.36□□□□□ -0.75
HMGCLL1-205ENST00000398661 FAM155BO75949 473 aa10.36□□□□□ -0.75
HMGCLL1-205ENST00000398661 STAMBPO95630 424 aa10.36□□□□□ -0.75
HMGCLL1-205ENST00000398661 CHRNA1P02708 482 aa10.36□□□□□ -0.75
HMGCLL1-205ENST00000398661 BPGMP07738 259 aa10.36□□□□□ -0.75
HMGCLL1-205ENST00000398661 WEE2P0C1S8 567 aa10.36□□□□□ -0.75
HMGCLL1-205ENST00000398661 EIF2B2P49770 351 aaKnown RBP10.36□□□□□ -0.75
HMGCLL1-205ENST00000398661 CCDC153Q494R4 210 aa10.36□□□□□ -0.75
HMGCLL1-205ENST00000398661 CCSAPQ6IQ19 270 aaPredicted RBP10.36□□□□□ -0.75
HMGCLL1-205ENST00000398661 ZCCHC23Q6ZST2 131 aa10.36□□□□□ -0.75
HMGCLL1-205ENST00000398661 FRMD7Q6ZUT3 714 aa10.36□□□□□ -0.75
HMGCLL1-205ENST00000398661 IGDCC3Q8IVU1 814 aa10.36□□□□□ -0.75
HMGCLL1-205ENST00000398661 CHERPQ8IWX8 916 aaKnown RBP10.36□□□□□ -0.75
HMGCLL1-205ENST00000398661 PDIK1LQ8N165 341 aa10.36□□□□□ -0.75
HMGCLL1-205ENST00000398661 GSDMBQ8TAX9 411 aa10.36□□□□□ -0.75
HMGCLL1-205ENST00000398661 LPPQ93052 612 aa10.36□□□□□ -0.75
HMGCLL1-205ENST00000398661 PLEKHA8Q96JA3 519 aa10.36□□□□□ -0.75
HMGCLL1-205ENST00000398661 MRPL4Q9BYD3 311 aaKnown RBP10.36□□□□□ -0.75
HMGCLL1-205ENST00000398661 SLC13A1Q9BZW2 595 aa10.36□□□□□ -0.75
HMGCLL1-205ENST00000398661 NACA2Q9H009 215 aa10.36□□□□□ -0.75
HMGCLL1-205ENST00000398661 FZD8Q9H461 694 aa10.36□□□□□ -0.75
HMGCLL1-205ENST00000398661 PDZD7Q9H5P4 517 aa10.36□□□□□ -0.75
HMGCLL1-205ENST00000398661 STN1Q9H668 368 aaKnown RBP10.36□□□□□ -0.75
HMGCLL1-205ENST00000398661 SPC25Q9HBM1 224 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms