RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 LACTBL1A8MY62 500 aa11.26□□□□□ -0.61
HPS4-202ENST00000398145 VWA5AO00534 786 aa11.26□□□□□ -0.61
HPS4-202ENST00000398145 LRCH4O75427 683 aa11.26□□□□□ -0.61
HPS4-202ENST00000398145 PEX2P28328 305 aa11.26□□□□□ -0.61
HPS4-202ENST00000398145 MSX2P35548 267 aaPredicted RBP11.26□□□□□ -0.61
HPS4-202ENST00000398145 GALK1P51570 392 aa11.26□□□□□ -0.61
HPS4-202ENST00000398145 IL5RAQ01344 420 aa11.26□□□□□ -0.61
HPS4-202ENST00000398145 DACT2Q5SW24 774 aa11.26□□□□□ -0.61
HPS4-202ENST00000398145 PTAR1Q7Z6K3 402 aaPredicted RBP11.26□□□□□ -0.61
HPS4-202ENST00000398145 ZDHHC13Q8IUH4 622 aa11.26□□□□□ -0.61
HPS4-202ENST00000398145 RORBQ92753 470 aa11.26□□□□□ -0.61
HPS4-202ENST00000398145 CPB2Q96IY4 423 aa11.26□□□□□ -0.61
HPS4-202ENST00000398145 TEX12Q9BXU0 123 aa11.26□□□□□ -0.61
HPS4-202ENST00000398145 PRDM16Q9HAZ2 1276 aa11.26□□□□□ -0.61
HPS4-202ENST00000398145 SNX15Q9NRS6 342 aa11.26□□□□□ -0.61
HPS4-202ENST00000398145 GNEQ9Y223 722 aaKnown RBP11.26□□□□□ -0.61
HPS4-202ENST00000398145 TRAFD1O14545 582 aaPredicted RBP11.26□□□□□ -0.61
HPS4-202ENST00000398145 RGS5O15539 181 aa11.26□□□□□ -0.61
HPS4-202ENST00000398145 YY1P25490 414 aa11.26□□□□□ -0.61
HPS4-202ENST00000398145 PSMB9P28065 219 aa11.26□□□□□ -0.61
HPS4-202ENST00000398145 SNX17Q15036 470 aa11.26□□□□□ -0.61
HPS4-202ENST00000398145 PTPN20Q4JDL3 420 aa11.26□□□□□ -0.61
HPS4-202ENST00000398145 CACHD1Q5VU97 1274 aa11.26□□□□□ -0.61
HPS4-202ENST00000398145 TRAF7Q6Q0C0 670 aa11.26□□□□□ -0.61
HPS4-202ENST00000398145 CENPLQ8N0S6 344 aaPredicted RBP11.26□□□□□ -0.61
HPS4-202ENST00000398145 MAGEE2Q8TD90 523 aaPredicted RBP11.26□□□□□ -0.61
HPS4-202ENST00000398145 PTCD3Q96EY7 689 aaKnown RBP11.26□□□□□ -0.61
HPS4-202ENST00000398145 CELF6Q96J87 481 aaKnown RBP11.26□□□□□ -0.61
HPS4-202ENST00000398145 MRIQ9BWK5 157 aa11.26□□□□□ -0.61
HPS4-202ENST00000398145 SPATA16Q9BXB7 569 aa11.26□□□□□ -0.61
HPS4-202ENST00000398145 CDH19Q9H159 772 aa11.26□□□□□ -0.61
HPS4-202ENST00000398145 MORF4L1Q9UBU8 362 aa11.26□□□□□ -0.61
HPS4-202ENST00000398145 DNAJB4Q9UDY4 337 aa11.26□□□□□ -0.61
HPS4-202ENST00000398145 LRFN2Q9ULH4 789 aa11.26□□□□□ -0.61
HPS4-202ENST00000398145 AFDNP55196 1824 aaKnown RBP11.26□□□□□ -0.61
HPS4-202ENST00000398145 PTGES3LE9PB15 166 aa11.26□□□□□ -0.61
HPS4-202ENST00000398145 VPS26AO75436 327 aa11.26□□□□□ -0.61
HPS4-202ENST00000398145 CABYRO75952 493 aa11.26□□□□□ -0.61
HPS4-202ENST00000398145 TKTL1P51854 596 aa11.26□□□□□ -0.61
HPS4-202ENST00000398145 HK2P52789 917 aa11.26□□□□□ -0.61
HPS4-202ENST00000398145 TGFB2P61812 414 aa11.26□□□□□ -0.61
HPS4-202ENST00000398145 ADIGQ0VDE8 80 aa11.26□□□□□ -0.61
HPS4-202ENST00000398145 SFSWAPQ12872 951 aaKnown RBP11.26□□□□□ -0.61
HPS4-202ENST00000398145 ZC3H12AQ5D1E8 599 aaKnown RBP11.26□□□□□ -0.61
HPS4-202ENST00000398145 ZNF618Q5T7W0 954 aa11.26□□□□□ -0.61
HPS4-202ENST00000398145 TTC30AQ86WT1 665 aa11.26□□□□□ -0.61
HPS4-202ENST00000398145 ADGRF2Q8IZF7 708 aa11.26□□□□□ -0.61
HPS4-202ENST00000398145 DNERQ8NFT8 737 aa11.26□□□□□ -0.61
HPS4-202ENST00000398145 RNF217Q8TC41 542 aa11.26□□□□□ -0.61
HPS4-202ENST00000398145 LRRC15Q8TF66 581 aa11.26□□□□□ -0.61
HPS4-202ENST00000398145 MID1IP1Q9NPA3 183 aa11.26□□□□□ -0.61
HPS4-202ENST00000398145 PTTG2Q9NZH5 202 aa11.26□□□□□ -0.61
HPS4-202ENST00000398145 SLC7A8Q9UHI5 535 aa11.26□□□□□ -0.61
HPS4-202ENST00000398145 FAM95CA0A1B0GW59 222 aa11.25□□□□□ -0.61
HPS4-202ENST00000398145 NCF1BA6NI72 391 aaPredicted RBP11.25□□□□□ -0.61
HPS4-202ENST00000398145 NCF1CA8MVU1 366 aaPredicted RBP11.25□□□□□ -0.61
HPS4-202ENST00000398145 NCF1P14598 390 aaPredicted RBP11.25□□□□□ -0.61
HPS4-202ENST00000398145 HLA-DPA1P20036 260 aa11.25□□□□□ -0.61
HPS4-202ENST00000398145 ATP6V1E1P36543 226 aa11.25□□□□□ -0.61
HPS4-202ENST00000398145 MAPK11Q15759 364 aa11.25□□□□□ -0.61
HPS4-202ENST00000398145 UGCGQ16739 394 aa11.25□□□□□ -0.61
HPS4-202ENST00000398145 INSCQ1MX18 579 aa11.25□□□□□ -0.61
HPS4-202ENST00000398145 DEPDC1Q5TB30 811 aa11.25□□□□□ -0.61
HPS4-202ENST00000398145 ABRAXAS1Q6UWZ7 409 aa11.25□□□□□ -0.61
HPS4-202ENST00000398145 FASTKD5Q7L8L6 764 aaKnown RBP11.25□□□□□ -0.61
HPS4-202ENST00000398145 CMC1Q7Z7K0 106 aa11.25□□□□□ -0.61
HPS4-202ENST00000398145 SFRP1Q8N474 314 aa11.25□□□□□ -0.61
HPS4-202ENST00000398145 TRPC4APQ8TEL6 797 aa11.25□□□□□ -0.61
HPS4-202ENST00000398145 EBF3Q9H4W6 596 aa11.25□□□□□ -0.61
HPS4-202ENST00000398145 ANAPC2Q9UJX6 822 aa11.25□□□□□ -0.61
HPS4-202ENST00000398145 CHD2O14647 1828 aaKnown RBP11.25□□□□□ -0.61
HPS4-202ENST00000398145 HMBSP08397 361 aa11.25□□□□□ -0.61
HPS4-202ENST00000398145 ATP5F1P24539 256 aaPredicted RBP11.25□□□□□ -0.61
HPS4-202ENST00000398145 CSE1LP55060 971 aaKnown RBP11.25□□□□□ -0.61
HPS4-202ENST00000398145 LPIN1Q14693 890 aa11.25□□□□□ -0.61
HPS4-202ENST00000398145 TAF5Q15542 800 aa11.25□□□□□ -0.61
HPS4-202ENST00000398145 CNPY1Q3B7I2 92 aa11.25□□□□□ -0.61
HPS4-202ENST00000398145 ZRANB3Q5FWF4 1079 aa11.25□□□□□ -0.61
HPS4-202ENST00000398145 LIPMQ5VYY2 423 aa11.25□□□□□ -0.61
HPS4-202ENST00000398145 FAM183BPQ6ZVS7 135 aa11.25□□□□□ -0.61
HPS4-202ENST00000398145 TRIM69Q86WT6 500 aa11.25□□□□□ -0.61
HPS4-202ENST00000398145 PRDM12Q9H4Q4 367 aa11.25□□□□□ -0.61
HPS4-202ENST00000398145 WDR55Q9H6Y2 383 aaPredicted RBP11.25□□□□□ -0.61
HPS4-202ENST00000398145 CDHR5Q9HBB8 845 aa11.25□□□□□ -0.61
HPS4-202ENST00000398145 RAB26Q9ULW5 256 aa11.25□□□□□ -0.61
HPS4-202ENST00000398145 COQ4Q9Y3A0 265 aa11.25□□□□□ -0.61
HPS4-202ENST00000398145 GLP2RO95838 553 aa11.25□□□□□ -0.61
HPS4-202ENST00000398145 VTNP04004 478 aa11.25□□□□□ -0.61
HPS4-202ENST00000398145 CYP1A1P04798 512 aaPredicted RBP11.25□□□□□ -0.61
HPS4-202ENST00000398145 SLC35G1Q2M3R5 365 aa11.25□□□□□ -0.61
HPS4-202ENST00000398145 FAM47BQ8NA70 645 aa11.25□□□□□ -0.61
HPS4-202ENST00000398145 VPS37AQ8NEZ2 397 aa11.25□□□□□ -0.61
HPS4-202ENST00000398145 APOL5Q9BWW9 433 aa11.25□□□□□ -0.61
HPS4-202ENST00000398145 PRKAG3Q9UGI9 489 aa11.25□□□□□ -0.61
HPS4-202ENST00000398145 POLG2Q9UHN1 485 aa11.25□□□□□ -0.61
HPS4-202ENST00000398145 TEKT2Q9UIF3 430 aa11.25□□□□□ -0.61
HPS4-202ENST00000398145 AKAP12Q02952 1782 aa11.25□□□□□ -0.61
HPS4-202ENST00000398145 IGLV3-22A0A075B6J6 115 aa11.25□□□□□ -0.61
HPS4-202ENST00000398145 RRN3P2A6NIE6 340 aa11.25□□□□□ -0.61
HPS4-202ENST00000398145 STX7O15400 261 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms