RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 IRAK2O43187 625 aa8.46□□□□□ -1.06
PTPRD-204ENST00000397606 MGEA5O60502 916 aa8.46□□□□□ -1.06
PTPRD-204ENST00000397606 OAZ2O95190 189 aa8.46□□□□□ -1.06
PTPRD-204ENST00000397606 DDX6P26196 483 aaKnown RBP eCLIP8.46□□□□□ -1.06
PTPRD-204ENST00000397606 RARS2Q5T160 578 aaKnown RBP8.46□□□□□ -1.06
PTPRD-204ENST00000397606 TRIM67Q6ZTA4 783 aa8.46□□□□□ -1.06
PTPRD-204ENST00000397606 WDR75Q8IWA0 830 aaKnown RBP8.46□□□□□ -1.06
PTPRD-204ENST00000397606 CPA6Q8N4T0 437 aa8.46□□□□□ -1.06
PTPRD-204ENST00000397606 EIF1ADQ8N9N8 165 aaKnown RBP8.46□□□□□ -1.06
PTPRD-204ENST00000397606 PHOSPHO2Q8TCD6 241 aa8.46□□□□□ -1.06
PTPRD-204ENST00000397606 CLEC4CQ8WTT0 213 aa8.46□□□□□ -1.06
PTPRD-204ENST00000397606 NTAN1Q96AB6 310 aa8.46□□□□□ -1.06
PTPRD-204ENST00000397606 TBL1YQ9BQ87 522 aa8.46□□□□□ -1.06
PTPRD-204ENST00000397606 BRD9Q9H8M2 597 aa8.46□□□□□ -1.06
PTPRD-204ENST00000397606 LATS2Q9NRM7 1088 aa8.46□□□□□ -1.06
PTPRD-204ENST00000397606 ETNK2Q9NVF9 386 aa8.46□□□□□ -1.06
PTPRD-204ENST00000397606 MRPL42Q9Y6G3 142 aaKnown RBP8.46□□□□□ -1.06
PTPRD-204ENST00000397606 A0A1B0GVM2 712 aa8.46□□□□□ -1.06
PTPRD-204ENST00000397606 TCAF2A6NFQ2 919 aa8.46□□□□□ -1.06
PTPRD-204ENST00000397606 TIMM44O43615 452 aa8.46□□□□□ -1.06
PTPRD-204ENST00000397606 NBNO60934 754 aa8.46□□□□□ -1.06
PTPRD-204ENST00000397606 HSD17B3P37058 310 aa8.46□□□□□ -1.06
PTPRD-204ENST00000397606 RPL21P46778 160 aaKnown RBP8.46□□□□□ -1.06
PTPRD-204ENST00000397606 TTLL9Q3SXZ7 439 aa8.46□□□□□ -1.06
PTPRD-204ENST00000397606 LHX8Q68G74 356 aa8.46□□□□□ -1.06
PTPRD-204ENST00000397606 UGT3A1Q6NUS8 523 aa8.46□□□□□ -1.06
PTPRD-204ENST00000397606 ANKRD33Q7Z3H0 272 aa8.46□□□□□ -1.06
PTPRD-204ENST00000397606 SPATS2Q86XZ4 545 aaKnown RBP8.46□□□□□ -1.06
PTPRD-204ENST00000397606 PPP1R16AQ96I34 528 aa8.46□□□□□ -1.06
PTPRD-204ENST00000397606 FAM96AQ9H5X1 160 aa8.46□□□□□ -1.06
PTPRD-204ENST00000397606 POLR2AP24928 1970 aaKnown RBP8.46□□□□□ -1.06
PTPRD-204ENST00000397606 CHADO15335 359 aa8.45□□□□□ -1.06
PTPRD-204ENST00000397606 HCRTO43612 131 aa8.45□□□□□ -1.06
PTPRD-204ENST00000397606 LRIG2O94898 1065 aa8.45□□□□□ -1.06
PTPRD-204ENST00000397606 CYP11A1P05108 521 aa8.45□□□□□ -1.06
PTPRD-204ENST00000397606 EDN1P05305 212 aa8.45□□□□□ -1.06
PTPRD-204ENST00000397606 PECAM1P16284 738 aaPredicted RBP8.45□□□□□ -1.06
PTPRD-204ENST00000397606 BMPR1AP36894 532 aa8.45□□□□□ -1.06
PTPRD-204ENST00000397606 CDKN2BP42772 138 aa8.45□□□□□ -1.06
PTPRD-204ENST00000397606 WDR5P61964 334 aaKnown RBP8.45□□□□□ -1.06
PTPRD-204ENST00000397606 FAAP100Q0VG06 881 aa8.45□□□□□ -1.06
PTPRD-204ENST00000397606 NOMO1Q15155 1222 aa8.45□□□□□ -1.06
PTPRD-204ENST00000397606 TMC5Q6UXY8 1006 aa8.45□□□□□ -1.06
PTPRD-204ENST00000397606 NUDCD3Q8IVD9 361 aa8.45□□□□□ -1.06
PTPRD-204ENST00000397606 RASGEF1CQ8N431 466 aa8.45□□□□□ -1.06
PTPRD-204ENST00000397606 DDX1Q92499 740 aaKnown RBP8.45□□□□□ -1.06
PTPRD-204ENST00000397606 MCUR1Q96AQ8 359 aa8.45□□□□□ -1.06
PTPRD-204ENST00000397606 ULK4Q96C45 1275 aa8.45□□□□□ -1.06
PTPRD-204ENST00000397606 SERPINB12Q96P63 405 aa8.45□□□□□ -1.06
PTPRD-204ENST00000397606 HAPLN3Q96S86 360 aa8.45□□□□□ -1.06
PTPRD-204ENST00000397606 KCTD15Q96SI1 283 aaPredicted RBP8.45□□□□□ -1.06
PTPRD-204ENST00000397606 PAAF1Q9BRP4 392 aa8.45□□□□□ -1.06
PTPRD-204ENST00000397606 ABCF3Q9NUQ8 709 aa8.45□□□□□ -1.06
PTPRD-204ENST00000397606 DEC1Q9P2X7 70 aa8.45□□□□□ -1.06
PTPRD-204ENST00000397606 SALL4Q9UJQ4 1053 aa8.45□□□□□ -1.06
PTPRD-204ENST00000397606 MAFFQ9ULX9 164 aa8.45□□□□□ -1.06
PTPRD-204ENST00000397606 MYH11P35749 1972 aa8.45□□□□□ -1.06
PTPRD-204ENST00000397606 ARFGEF1Q9Y6D6 1849 aa8.45□□□□□ -1.06
PTPRD-204ENST00000397606 NEDD8-MDP1E9PL57 170 aa8.45□□□□□ -1.06
PTPRD-204ENST00000397606 TMEM189-UBE2V1I3L0A0 370 aa8.45□□□□□ -1.06
PTPRD-204ENST00000397606 M0QZQ0 153 aa8.45□□□□□ -1.06
PTPRD-204ENST00000397606 PDE2AO00408 941 aaPredicted RBP8.45□□□□□ -1.06
PTPRD-204ENST00000397606 KPNA3O00505 521 aaPredicted RBP8.45□□□□□ -1.06
PTPRD-204ENST00000397606 CIB2O75838 187 aa8.45□□□□□ -1.06
PTPRD-204ENST00000397606 C1RP00736 705 aa8.45□□□□□ -1.06
PTPRD-204ENST00000397606 CYP2A6P11509 494 aaPredicted RBP8.45□□□□□ -1.06
PTPRD-204ENST00000397606 EN2P19622 333 aaPredicted RBP8.45□□□□□ -1.06
PTPRD-204ENST00000397606 CHRM3P20309 590 aa8.45□□□□□ -1.06
PTPRD-204ENST00000397606 MAP4P27816 1152 aaKnown RBP8.45□□□□□ -1.06
PTPRD-204ENST00000397606 MAPKAPK2P49137 400 aa8.45□□□□□ -1.06
PTPRD-204ENST00000397606 RABGGTBP53611 331 aa8.45□□□□□ -1.06
PTPRD-204ENST00000397606 CDH4P55283 916 aa8.45□□□□□ -1.06
PTPRD-204ENST00000397606 WNT7BP56706 349 aa8.45□□□□□ -1.06
PTPRD-204ENST00000397606 POU6F1Q14863 301 aa8.45□□□□□ -1.06
PTPRD-204ENST00000397606 OLFML1Q6UWY5 402 aa8.45□□□□□ -1.06
PTPRD-204ENST00000397606 RNF19BQ6ZMZ0 732 aa8.45□□□□□ -1.06
PTPRD-204ENST00000397606 CCNYL1Q8N7R7 359 aa8.45□□□□□ -1.06
PTPRD-204ENST00000397606 CCDC197Q8NCU1 140 aa8.45□□□□□ -1.06
PTPRD-204ENST00000397606 TOP1MTQ969P6 601 aa8.45□□□□□ -1.06
PTPRD-204ENST00000397606 LGMNQ99538 433 aa8.45□□□□□ -1.06
PTPRD-204ENST00000397606 CDC42EP4Q9H3Q1 356 aaKnown RBP8.45□□□□□ -1.06
PTPRD-204ENST00000397606 SUDS3Q9H7L9 328 aaPredicted RBP8.45□□□□□ -1.06
PTPRD-204ENST00000397606 FAM8A1Q9UBU6 413 aa8.45□□□□□ -1.06
PTPRD-204ENST00000397606 CNTN6Q9UQ52 1028 aa8.45□□□□□ -1.06
PTPRD-204ENST00000397606 CDK5RAP2Q96SN8 1893 aa8.45□□□□□ -1.06
PTPRD-204ENST00000397606 TULP2O00295 520 aa8.45□□□□□ -1.06
PTPRD-204ENST00000397606 GLP2RO95838 553 aa8.45□□□□□ -1.06
PTPRD-204ENST00000397606 CFHP08603 1231 aa8.45□□□□□ -1.06
PTPRD-204ENST00000397606 UBE3AQ05086 875 aa8.45□□□□□ -1.06
PTPRD-204ENST00000397606 MGAT5Q09328 741 aa8.45□□□□□ -1.06
PTPRD-204ENST00000397606 AUHQ13825 339 aaKnown RBP8.45□□□□□ -1.06
PTPRD-204ENST00000397606 SERPINA13PQ6UXR4 307 aa8.45□□□□□ -1.06
PTPRD-204ENST00000397606 CFAP52Q8N1V2 620 aa8.45□□□□□ -1.06
PTPRD-204ENST00000397606 CCDC185Q8N715 623 aa8.45□□□□□ -1.06
PTPRD-204ENST00000397606 PITPNM3Q9BZ71 974 aa8.45□□□□□ -1.06
PTPRD-204ENST00000397606 ATP13A3Q9H7F0 1226 aa8.45□□□□□ -1.06
PTPRD-204ENST00000397606 PAK6Q9NQU5 681 aaPredicted RBP8.45□□□□□ -1.06
PTPRD-204ENST00000397606 MAN1C1Q9NR34 630 aa8.45□□□□□ -1.06
PTPRD-204ENST00000397606 MTRRQ9UBK8 725 aa8.45□□□□□ -1.06
PTPRD-204ENST00000397606 A0A1W2PRU2 124 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms