RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 SSR1P43307 286 aaKnown RBP26.07■■□□□ 1.76
TSPAN4-207ENST00000397411 ZNF252P-AS1Q0IIN9 211 aa26.07■■□□□ 1.76
TSPAN4-207ENST00000397411 USP39Q53GS9 565 aaKnown RBP26.07■■□□□ 1.76
TSPAN4-207ENST00000397411 ERMARDQ5T6L9 678 aa26.07■■□□□ 1.76
TSPAN4-207ENST00000397411 PRR23BQ6ZRT6 265 aa26.07■■□□□ 1.76
TSPAN4-207ENST00000397411 SETD3Q86TU7 594 aaPredicted RBP26.07■■□□□ 1.76
TSPAN4-207ENST00000397411 PYROXD2Q8N2H3 581 aa26.07■■□□□ 1.76
TSPAN4-207ENST00000397411 ZNF564Q8TBZ8 553 aaPredicted RBP26.07■■□□□ 1.76
TSPAN4-207ENST00000397411 PANX2Q96RD6 677 aa26.07■■□□□ 1.76
TSPAN4-207ENST00000397411 PACSIN1Q9BY11 444 aa26.07■■□□□ 1.76
TSPAN4-207ENST00000397411 UVRAGQ9P2Y5 699 aa26.07■■□□□ 1.76
TSPAN4-207ENST00000397411 FANCMQ8IYD8 2048 aa26.07■■□□□ 1.76
TSPAN4-207ENST00000397411 DOCK4Q8N1I0 1966 aa26.06■■□□□ 1.76
TSPAN4-207ENST00000397411 FAM72CH0Y354 149 aa26.06■■□□□ 1.76
TSPAN4-207ENST00000397411 HRO43593 1189 aa26.06■■□□□ 1.76
TSPAN4-207ENST00000397411 LILRB5O75023 590 aa26.06■■□□□ 1.76
TSPAN4-207ENST00000397411 LRIG2O94898 1065 aa26.06■■□□□ 1.76
TSPAN4-207ENST00000397411 SRPRAP08240 638 aaKnown RBP26.06■■□□□ 1.76
TSPAN4-207ENST00000397411 TMEM253P0C7T8 217 aa26.06■■□□□ 1.76
TSPAN4-207ENST00000397411 HLA-EP13747 358 aa26.06■■□□□ 1.76
TSPAN4-207ENST00000397411 RHOQP17081 205 aa26.06■■□□□ 1.76
TSPAN4-207ENST00000397411 PRKCHP24723 683 aa26.06■■□□□ 1.76
TSPAN4-207ENST00000397411 PLK1P53350 603 aa26.06■■□□□ 1.76
TSPAN4-207ENST00000397411 KRT83P78385 493 aa26.06■■□□□ 1.76
TSPAN4-207ENST00000397411 SIM2Q14190 667 aaPredicted RBP26.06■■□□□ 1.76
TSPAN4-207ENST00000397411 FAM72AQ5TYM5 149 aa26.06■■□□□ 1.76
TSPAN4-207ENST00000397411 FAM72DQ6L9T8 149 aa26.06■■□□□ 1.76
TSPAN4-207ENST00000397411 KIAA1211LQ6NV74 962 aa26.06■■□□□ 1.76
TSPAN4-207ENST00000397411 FAM72BQ86X60 149 aa26.06■■□□□ 1.76
TSPAN4-207ENST00000397411 SPC24Q8NBT2 197 aa26.06■■□□□ 1.76
TSPAN4-207ENST00000397411 BTBD6Q96KE9 485 aa26.06■■□□□ 1.76
TSPAN4-207ENST00000397411 SPON2Q9BUD6 331 aa26.06■■□□□ 1.76
TSPAN4-207ENST00000397411 DHX35Q9H5Z1 703 aaKnown RBP26.06■■□□□ 1.76
TSPAN4-207ENST00000397411 SLC25A13Q9UJS0 675 aa26.06■■□□□ 1.76
TSPAN4-207ENST00000397411 AP4E1Q9UPM8 1137 aa26.06■■□□□ 1.76
TSPAN4-207ENST00000397411 RPP40O75818 363 aaKnown RBP26.05■■□□□ 1.76
TSPAN4-207ENST00000397411 EPHB2P29323 1055 aa26.05■■□□□ 1.76
TSPAN4-207ENST00000397411 CYLC1P35663 651 aaPredicted RBP26.05■■□□□ 1.76
TSPAN4-207ENST00000397411 CTSOP43234 321 aaPredicted RBP26.05■■□□□ 1.76
TSPAN4-207ENST00000397411 SRSF5Q13243 272 aaKnown RBP26.05■■□□□ 1.76
TSPAN4-207ENST00000397411 ENPP2Q13822 863 aa26.05■■□□□ 1.76
TSPAN4-207ENST00000397411 BYSLQ13895 437 aaKnown RBP26.05■■□□□ 1.76
TSPAN4-207ENST00000397411 PTPRNQ16849 979 aa26.05■■□□□ 1.76
TSPAN4-207ENST00000397411 RASSF3Q86WH2 238 aa26.05■■□□□ 1.76
TSPAN4-207ENST00000397411 ZNF366Q8N895 744 aa26.05■■□□□ 1.76
TSPAN4-207ENST00000397411 MDGA1Q8NFP4 955 aa26.05■■□□□ 1.76
TSPAN4-207ENST00000397411 RETREG1Q9H6L5 497 aa26.05■■□□□ 1.76
TSPAN4-207ENST00000397411 GPATCH2LQ9NWQ4 482 aa26.05■■□□□ 1.76
TSPAN4-207ENST00000397411 USP18Q9UMW8 372 aa26.05■■□□□ 1.76
TSPAN4-207ENST00000397411 DAPK3O43293 454 aa26.04■■□□□ 1.76
TSPAN4-207ENST00000397411 LRCH4O75427 683 aa26.04■■□□□ 1.76
TSPAN4-207ENST00000397411 LMNAP02545 664 aaKnown RBP26.04■■□□□ 1.76
TSPAN4-207ENST00000397411 CDC25BP30305 580 aa26.04■■□□□ 1.76
TSPAN4-207ENST00000397411 PCK1P35558 622 aa26.04■■□□□ 1.76
TSPAN4-207ENST00000397411 MAGEA1P43355 309 aa26.04■■□□□ 1.76
TSPAN4-207ENST00000397411 SPA17Q15506 151 aa26.04■■□□□ 1.76
TSPAN4-207ENST00000397411 KIAA1324Q6UXG2 1013 aaKnown RBP26.04■■□□□ 1.76
TSPAN4-207ENST00000397411 TMTC1Q8IUR5 882 aa26.04■■□□□ 1.76
TSPAN4-207ENST00000397411 CCDC170Q8IYT3 715 aa26.04■■□□□ 1.76
TSPAN4-207ENST00000397411 ARFGAP1Q8N6T3 406 aa26.04■■□□□ 1.76
TSPAN4-207ENST00000397411 GAB3Q8WWW8 586 aa26.04■■□□□ 1.76
TSPAN4-207ENST00000397411 RPL10LQ96L21 214 aaKnown RBP26.04■■□□□ 1.76
TSPAN4-207ENST00000397411 TMEM245Q9H330 911 aa26.04■■□□□ 1.76
TSPAN4-207ENST00000397411 CATSPERBQ9H7T0 1116 aa26.04■■□□□ 1.76
TSPAN4-207ENST00000397411 IMPACTQ9P2X3 320 aa26.04■■□□□ 1.76
TSPAN4-207ENST00000397411 DNAI1Q9UI46 699 aa26.04■■□□□ 1.76
TSPAN4-207ENST00000397411 INVSQ9Y283 1065 aa26.04■■□□□ 1.76
TSPAN4-207ENST00000397411 ILVBLA1L0T0 632 aa26.03■■□□□ 1.76
TSPAN4-207ENST00000397411 PROB1E7EW31 1015 aa26.03■■□□□ 1.76
TSPAN4-207ENST00000397411 GABRG2P18507 467 aa26.03■■□□□ 1.76
TSPAN4-207ENST00000397411 ACCSLQ4AC99 568 aa26.03■■□□□ 1.76
TSPAN4-207ENST00000397411 MANEALQ5VSG8 457 aa26.03■■□□□ 1.76
TSPAN4-207ENST00000397411 ZNF783Q6ZMS7 281 aa26.03■■□□□ 1.76
TSPAN4-207ENST00000397411 KDM1BQ8NB78 822 aa26.03■■□□□ 1.76
TSPAN4-207ENST00000397411 OR52K2Q8NGK3 314 aa26.03■■□□□ 1.76
TSPAN4-207ENST00000397411 SNRNP25Q9BV90 132 aaKnown RBP26.03■■□□□ 1.76
TSPAN4-207ENST00000397411 C2orf49Q9BVC5 232 aaPredicted RBP26.03■■□□□ 1.76
TSPAN4-207ENST00000397411 ZWILCHQ9H900 591 aa26.03■■□□□ 1.76
TSPAN4-207ENST00000397411 LUC7LQ9NQ29 371 aaKnown RBP26.03■■□□□ 1.76
TSPAN4-207ENST00000397411 LCMT1Q9UIC8 334 aa26.03■■□□□ 1.76
TSPAN4-207ENST00000397411 EIF3CLB5ME19 914 aaKnown RBP26.02■■□□□ 1.76
TSPAN4-207ENST00000397411 MAP3K13O43283 966 aa26.02■■□□□ 1.76
TSPAN4-207ENST00000397411 IPO7O95373 1038 aaKnown RBP26.02■■□□□ 1.76
TSPAN4-207ENST00000397411 MAPKAPK2P49137 400 aa26.02■■□□□ 1.76
TSPAN4-207ENST00000397411 TPI1P60174 286 aa26.02■■□□□ 1.76
TSPAN4-207ENST00000397411 HADHQ16836 314 aaKnown RBP26.02■■□□□ 1.76
TSPAN4-207ENST00000397411 BOLA3Q53S33 107 aa26.02■■□□□ 1.76
TSPAN4-207ENST00000397411 PPP6R3Q5H9R7 873 aaPredicted RBP26.02■■□□□ 1.76
TSPAN4-207ENST00000397411 IL31Q6EBC2 164 aa26.02■■□□□ 1.76
TSPAN4-207ENST00000397411 PSTKQ8IV42 348 aaKnown RBP26.02■■□□□ 1.76
TSPAN4-207ENST00000397411 ALG14Q96F25 216 aa26.02■■□□□ 1.76
TSPAN4-207ENST00000397411 SPACA7Q96KW9 195 aa26.02■■□□□ 1.76
TSPAN4-207ENST00000397411 PEBP4Q96S96 227 aa26.02■■□□□ 1.76
TSPAN4-207ENST00000397411 EIF3CQ99613 913 aaKnown RBP26.02■■□□□ 1.76
TSPAN4-207ENST00000397411 PRDM16Q9HAZ2 1276 aa26.02■■□□□ 1.76
TSPAN4-207ENST00000397411 TMEM248Q9NWD8 314 aa26.02■■□□□ 1.76
TSPAN4-207ENST00000397411 SLCO3A1Q9UIG8 710 aa26.02■■□□□ 1.76
TSPAN4-207ENST00000397411 TMEM110-MUSTN1A8MSY1 372 aa26.01■■□□□ 1.75
TSPAN4-207ENST00000397411 EEF2KO00418 725 aaKnown RBP26.01■■□□□ 1.75
TSPAN4-207ENST00000397411 NDUFV2P19404 249 aa26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms