RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 NKD2Q969F2 451 aaPredicted RBP17.41■□□□□ 0.38
TSPAN4-205ENST00000397406 RPRD1AQ96P16 312 aaPredicted RBP17.41■□□□□ 0.38
TSPAN4-205ENST00000397406 DDX50Q9BQ39 737 aaKnown RBP17.41■□□□□ 0.38
TSPAN4-205ENST00000397406 ZNF212Q9UDV6 495 aa17.41■□□□□ 0.38
TSPAN4-205ENST00000397406 PCYOX1Q9UHG3 505 aa17.41■□□□□ 0.38
TSPAN4-205ENST00000397406 HEY1Q9Y5J3 304 aa17.41■□□□□ 0.38
TSPAN4-205ENST00000397406 KCNJ1P48048 391 aa17.4■□□□□ 0.38
TSPAN4-205ENST00000397406 SGSHP51688 502 aa17.4■□□□□ 0.38
TSPAN4-205ENST00000397406 BYSLQ13895 437 aaKnown RBP17.4■□□□□ 0.38
TSPAN4-205ENST00000397406 ALYREFQ86V81 257 aaKnown RBP17.4■□□□□ 0.38
TSPAN4-205ENST00000397406 CPXM2Q8N436 756 aa17.4■□□□□ 0.38
TSPAN4-205ENST00000397406 ASB16Q96NS5 453 aa17.4■□□□□ 0.38
TSPAN4-205ENST00000397406 OLFM3Q96PB7 478 aa17.4■□□□□ 0.38
TSPAN4-205ENST00000397406 LRRC1Q9BTT6 524 aa17.4■□□□□ 0.38
TSPAN4-205ENST00000397406 KIF9Q9HAQ2 790 aa17.4■□□□□ 0.38
TSPAN4-205ENST00000397406 NDFIP2Q9NV92 336 aa17.4■□□□□ 0.38
TSPAN4-205ENST00000397406 TMEM248Q9NWD8 314 aa17.4■□□□□ 0.38
TSPAN4-205ENST00000397406 GDE1Q9NZC3 331 aa17.4■□□□□ 0.38
TSPAN4-205ENST00000397406 AMACRQ9UHK6 382 aa17.4■□□□□ 0.38
TSPAN4-205ENST00000397406 NUMBLQ9Y6R0 609 aa17.4■□□□□ 0.38
TSPAN4-205ENST00000397406 TRDMT1O14717 391 aaKnown RBP17.39■□□□□ 0.38
TSPAN4-205ENST00000397406 RAD51CO43502 376 aa17.39■□□□□ 0.38
TSPAN4-205ENST00000397406 MAP3K6O95382 1288 aa17.39■□□□□ 0.38
TSPAN4-205ENST00000397406 SERPINB6P35237 376 aa17.39■□□□□ 0.38
TSPAN4-205ENST00000397406 PTGIRP43119 386 aa17.39■□□□□ 0.38
TSPAN4-205ENST00000397406 EIF3EP60228 445 aaKnown RBP17.39■□□□□ 0.38
TSPAN4-205ENST00000397406 TUBB4BP68371 445 aa17.39■□□□□ 0.38
TSPAN4-205ENST00000397406 FAM78AQ5JUQ0 283 aa17.39■□□□□ 0.38
TSPAN4-205ENST00000397406 RABGAP1LQ5R372 815 aa17.39■□□□□ 0.38
TSPAN4-205ENST00000397406 C8orf74Q6P047 294 aa17.39■□□□□ 0.38
TSPAN4-205ENST00000397406 CIR1Q86X95 450 aaPredicted RBP17.39■□□□□ 0.38
TSPAN4-205ENST00000397406 TP53INP2Q8IXH6 220 aa17.39■□□□□ 0.38
TSPAN4-205ENST00000397406 CFAP52Q8N1V2 620 aa17.39■□□□□ 0.38
TSPAN4-205ENST00000397406 NETO2Q8NC67 525 aa17.39■□□□□ 0.38
TSPAN4-205ENST00000397406 TTC16Q8NEE8 873 aa17.39■□□□□ 0.38
TSPAN4-205ENST00000397406 SLCO2A1Q92959 643 aa17.39■□□□□ 0.38
TSPAN4-205ENST00000397406 RUNDC3BQ96NL0 473 aa17.39■□□□□ 0.38
TSPAN4-205ENST00000397406 RETREG1Q9H6L5 497 aa17.39■□□□□ 0.38
TSPAN4-205ENST00000397406 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.39■□□□□ 0.38
TSPAN4-205ENST00000397406 CDH7Q9ULB5 785 aa17.39■□□□□ 0.38
TSPAN4-205ENST00000397406 DRG1Q9Y295 367 aaKnown RBP17.39■□□□□ 0.38
TSPAN4-205ENST00000397406 RAD54BQ9Y620 910 aa17.39■□□□□ 0.38
TSPAN4-205ENST00000397406 ZFP37Q9Y6Q3 630 aaPredicted RBP17.39■□□□□ 0.38
TSPAN4-205ENST00000397406 V9GYY5 206 aaPredicted RBP17.39■□□□□ 0.38
TSPAN4-205ENST00000397406 MYOFQ9NZM1 2061 aa17.39■□□□□ 0.37
TSPAN4-205ENST00000397406 MCF2LO15068 1137 aa17.38■□□□□ 0.37
TSPAN4-205ENST00000397406 CTIFO43310 598 aaKnown RBP17.38■□□□□ 0.37
TSPAN4-205ENST00000397406 TSPAN3O60637 253 aa17.38■□□□□ 0.37
TSPAN4-205ENST00000397406 ITGAVP06756 1048 aa17.38■□□□□ 0.37
TSPAN4-205ENST00000397406 RBP3P10745 1247 aa17.38■□□□□ 0.37
TSPAN4-205ENST00000397406 RPS24P62847 133 aaKnown RBP17.38■□□□□ 0.37
TSPAN4-205ENST00000397406 XRCC4Q13426 336 aa17.38■□□□□ 0.37
TSPAN4-205ENST00000397406 DHX34Q14147 1143 aaKnown RBP17.38■□□□□ 0.37
TSPAN4-205ENST00000397406 GLE1Q53GS7 698 aaKnown RBP17.38■□□□□ 0.37
TSPAN4-205ENST00000397406 AFMIDQ63HM1 303 aa17.38■□□□□ 0.37
TSPAN4-205ENST00000397406 ASTLQ6HA08 431 aaPredicted RBP17.38■□□□□ 0.37
TSPAN4-205ENST00000397406 BZW1Q7L1Q6 419 aaKnown RBP17.38■□□□□ 0.37
TSPAN4-205ENST00000397406 TFAP2DQ7Z6R9 452 aa17.38■□□□□ 0.37
TSPAN4-205ENST00000397406 ZC3H18Q86VM9 953 aaKnown RBP17.38■□□□□ 0.37
TSPAN4-205ENST00000397406 ARHGAP12Q8IWW6 846 aa17.38■□□□□ 0.37
TSPAN4-205ENST00000397406 CCDC105Q8IYK2 499 aa17.38■□□□□ 0.37
TSPAN4-205ENST00000397406 LZTR1Q8N653 840 aa17.38■□□□□ 0.37
TSPAN4-205ENST00000397406 CELF5Q8N6W0 485 aaKnown RBP17.38■□□□□ 0.37
TSPAN4-205ENST00000397406 ATL2Q8NHH9 583 aa17.38■□□□□ 0.37
TSPAN4-205ENST00000397406 SMARCD2Q92925 531 aa17.38■□□□□ 0.37
TSPAN4-205ENST00000397406 RSPRY1Q96DX4 576 aa17.38■□□□□ 0.37
TSPAN4-205ENST00000397406 NOL6Q9H6R4 1146 aaKnown RBP17.38■□□□□ 0.37
TSPAN4-205ENST00000397406 TRPV4Q9HBA0 871 aa17.38■□□□□ 0.37
TSPAN4-205ENST00000397406 COL4A3Q01955 1670 aa17.38■□□□□ 0.37
TSPAN4-205ENST00000397406 TTI1O43156 1089 aa17.38■□□□□ 0.37
TSPAN4-205ENST00000397406 MRPS25P82663 173 aaKnown RBP17.38■□□□□ 0.37
TSPAN4-205ENST00000397406 DR1Q01658 176 aa17.38■□□□□ 0.37
TSPAN4-205ENST00000397406 GALNT2Q10471 571 aa17.38■□□□□ 0.37
TSPAN4-205ENST00000397406 NAA30Q147X3 362 aaPredicted RBP17.38■□□□□ 0.37
TSPAN4-205ENST00000397406 ERCC6LQ2NKX8 1250 aa17.38■□□□□ 0.37
TSPAN4-205ENST00000397406 TTC39BQ5VTQ0 682 aaPredicted RBP17.38■□□□□ 0.37
TSPAN4-205ENST00000397406 SIX5Q8N196 739 aa17.38■□□□□ 0.37
TSPAN4-205ENST00000397406 UMODL1-AS1Q8N2C9 162 aa17.38■□□□□ 0.37
TSPAN4-205ENST00000397406 CCDC33Q8N5R6 958 aa17.38■□□□□ 0.37
TSPAN4-205ENST00000397406 KIAA1958Q8N8K9 716 aa17.38■□□□□ 0.37
TSPAN4-205ENST00000397406 CCDC26Q8TAB7 109 aa17.38■□□□□ 0.37
TSPAN4-205ENST00000397406 UBXN4Q92575 508 aa17.38■□□□□ 0.37
TSPAN4-205ENST00000397406 P2RY11Q96G91 374 aa17.38■□□□□ 0.37
TSPAN4-205ENST00000397406 LRRC3BQ96PB8 259 aa17.38■□□□□ 0.37
TSPAN4-205ENST00000397406 C10orf88Q9H8K7 445 aa17.38■□□□□ 0.37
TSPAN4-205ENST00000397406 FAM86C1Q9NVL1 165 aa17.38■□□□□ 0.37
TSPAN4-205ENST00000397406 ZNF148Q9UQR1 794 aa17.38■□□□□ 0.37
TSPAN4-205ENST00000397406 MYO15AQ9UKN7 3530 aa17.37■□□□□ 0.37
TSPAN4-205ENST00000397406 A0A1B0GVM2 712 aa17.37■□□□□ 0.37
TSPAN4-205ENST00000397406 TCAF2A6NFQ2 919 aa17.37■□□□□ 0.37
TSPAN4-205ENST00000397406 H7C0C1 242 aa17.37■□□□□ 0.37
TSPAN4-205ENST00000397406 RHOXF2BP0C7M4 288 aa17.37■□□□□ 0.37
TSPAN4-205ENST00000397406 FCARP24071 287 aa17.37■□□□□ 0.37
TSPAN4-205ENST00000397406 CHKAP35790 457 aa17.37■□□□□ 0.37
TSPAN4-205ENST00000397406 ATP5OP48047 213 aa17.37■□□□□ 0.37
TSPAN4-205ENST00000397406 MAPKAPK2P49137 400 aa17.37■□□□□ 0.37
TSPAN4-205ENST00000397406 CDH4P55283 916 aa17.37■□□□□ 0.37
TSPAN4-205ENST00000397406 B4GALNT4Q76KP1 1039 aa17.37■□□□□ 0.37
TSPAN4-205ENST00000397406 CHST9Q7L1S5 443 aa17.37■□□□□ 0.37
TSPAN4-205ENST00000397406 MAATS1Q7Z4T9 603 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms