RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 AGFG2O95081 481 aa9.77□□□□□ -0.85
NEDD9-203ENST00000397378 TGM2P21980 687 aa9.77□□□□□ -0.85
NEDD9-203ENST00000397378 DGKAP23743 735 aa9.77□□□□□ -0.85
NEDD9-203ENST00000397378 CYP4F2P78329 520 aa9.77□□□□□ -0.85
NEDD9-203ENST00000397378 STK38Q15208 465 aa9.77□□□□□ -0.85
NEDD9-203ENST00000397378 CST6Q15828 149 aa9.77□□□□□ -0.85
NEDD9-203ENST00000397378 HNRNPA1L2Q32P51 320 aaKnown RBP9.77□□□□□ -0.85
NEDD9-203ENST00000397378 NAPEPLDQ6IQ20 393 aa9.77□□□□□ -0.85
NEDD9-203ENST00000397378 BHLHA9Q7RTU4 235 aa9.77□□□□□ -0.85
NEDD9-203ENST00000397378 PIGZQ86VD9 579 aa9.77□□□□□ -0.85
NEDD9-203ENST00000397378 JAMLQ86YT9 394 aa9.77□□□□□ -0.85
NEDD9-203ENST00000397378 HOMEZQ8IX15 550 aa9.77□□□□□ -0.85
NEDD9-203ENST00000397378 TTC39CQ8N584 583 aa9.77□□□□□ -0.85
NEDD9-203ENST00000397378 MFSD2AQ8NA29 543 aa9.77□□□□□ -0.85
NEDD9-203ENST00000397378 KDM1BQ8NB78 822 aa9.77□□□□□ -0.85
NEDD9-203ENST00000397378 WDR36Q8NI36 951 aaKnown RBP9.77□□□□□ -0.85
NEDD9-203ENST00000397378 IFI44Q8TCB0 444 aa9.77□□□□□ -0.85
NEDD9-203ENST00000397378 WFDC5Q8TCV5 224 aa9.77□□□□□ -0.85
NEDD9-203ENST00000397378 TTC17Q96AE7 1141 aa9.77□□□□□ -0.85
NEDD9-203ENST00000397378 GRAMD1AQ96CP6 724 aa9.77□□□□□ -0.85
NEDD9-203ENST00000397378 FAXDC2Q96IV6 333 aa9.77□□□□□ -0.85
NEDD9-203ENST00000397378 LMLNQ96KR4 655 aa9.77□□□□□ -0.85
NEDD9-203ENST00000397378 NEUROG2Q9H2A3 272 aa9.77□□□□□ -0.85
NEDD9-203ENST00000397378 KCTD10Q9H3F6 313 aa9.77□□□□□ -0.85
NEDD9-203ENST00000397378 ZSCAN16Q9H4T2 348 aaPredicted RBP9.77□□□□□ -0.85
NEDD9-203ENST00000397378 UCKL1Q9NWZ5 548 aa9.77□□□□□ -0.85
NEDD9-203ENST00000397378 PCDHGA4Q9Y5G9 962 aa9.77□□□□□ -0.85
NEDD9-203ENST00000397378 KIF26BQ2KJY2 2108 aa9.77□□□□□ -0.85
NEDD9-203ENST00000397378 LRRK1Q38SD2 2015 aa9.77□□□□□ -0.85
NEDD9-203ENST00000397378 PDXKO00764 312 aa9.76□□□□□ -0.85
NEDD9-203ENST00000397378 SPTLC2O15270 562 aa9.76□□□□□ -0.85
NEDD9-203ENST00000397378 MID1O15344 667 aa9.76□□□□□ -0.85
NEDD9-203ENST00000397378 LATO43561 262 aa9.76□□□□□ -0.85
NEDD9-203ENST00000397378 LZTS3O60299 673 aaPredicted RBP9.76□□□□□ -0.85
NEDD9-203ENST00000397378 SIN3BO75182 1162 aa9.76□□□□□ -0.85
NEDD9-203ENST00000397378 RTN2O75298 545 aa9.76□□□□□ -0.85
NEDD9-203ENST00000397378 ZBED1O96006 694 aa9.76□□□□□ -0.85
NEDD9-203ENST00000397378 NR3C1P04150 777 aa9.76□□□□□ -0.85
NEDD9-203ENST00000397378 ASLP04424 464 aa9.76□□□□□ -0.85
NEDD9-203ENST00000397378 ITGA2BP08514 1039 aa9.76□□□□□ -0.85
NEDD9-203ENST00000397378 CD58P19256 250 aa9.76□□□□□ -0.85
NEDD9-203ENST00000397378 TNFRSF8P28908 595 aa9.76□□□□□ -0.85
NEDD9-203ENST00000397378 CASP1P29466 404 aa9.76□□□□□ -0.85
NEDD9-203ENST00000397378 CD70P32970 193 aa9.76□□□□□ -0.85
NEDD9-203ENST00000397378 MLLT3P42568 568 aaPredicted RBP9.76□□□□□ -0.85
NEDD9-203ENST00000397378 SGSHP51688 502 aa9.76□□□□□ -0.85
NEDD9-203ENST00000397378 TKTL1P51854 596 aa9.76□□□□□ -0.85
NEDD9-203ENST00000397378 ST8SIA6P61647 398 aa9.76□□□□□ -0.85
NEDD9-203ENST00000397378 MANEAQ5SRI9 462 aa9.76□□□□□ -0.85
NEDD9-203ENST00000397378 C9orf64Q5T6V5 341 aa9.76□□□□□ -0.85
NEDD9-203ENST00000397378 PIK3R6Q5UE93 754 aa9.76□□□□□ -0.85
NEDD9-203ENST00000397378 ARHGAP17Q68EM7 881 aa9.76□□□□□ -0.85
NEDD9-203ENST00000397378 ZNF787Q6DD87 383 aa9.76□□□□□ -0.85
NEDD9-203ENST00000397378 SHC4Q6S5L8 630 aa9.76□□□□□ -0.85
NEDD9-203ENST00000397378 RBM44Q6ZP01 1051 aaKnown RBP9.76□□□□□ -0.85
NEDD9-203ENST00000397378 C14orf80Q86SX3 495 aa9.76□□□□□ -0.85
NEDD9-203ENST00000397378 IQCHQ86VS3 1027 aa9.76□□□□□ -0.85
NEDD9-203ENST00000397378 ATCAYQ86WG3 371 aa9.76□□□□□ -0.85
NEDD9-203ENST00000397378 ANKRD52Q8NB46 1076 aa9.76□□□□□ -0.85
NEDD9-203ENST00000397378 OR14C36Q8NHC7 312 aa9.76□□□□□ -0.85
NEDD9-203ENST00000397378 SPATA20Q8TB22 786 aa9.76□□□□□ -0.85
NEDD9-203ENST00000397378 HEXIM2Q96MH2 286 aaKnown RBP9.76□□□□□ -0.85
NEDD9-203ENST00000397378 BLZF1Q9H2G9 400 aa9.76□□□□□ -0.85
NEDD9-203ENST00000397378 ADNPQ9H2P0 1102 aa9.76□□□□□ -0.85
NEDD9-203ENST00000397378 MTG2Q9H4K7 406 aa9.76□□□□□ -0.85
NEDD9-203ENST00000397378 SFMBT1Q9UHJ3 866 aa9.76□□□□□ -0.85
NEDD9-203ENST00000397378 ANAPC2Q9UJX6 822 aa9.76□□□□□ -0.85
NEDD9-203ENST00000397378 RP1P56715 2156 aa9.75□□□□□ -0.85
NEDD9-203ENST00000397378 TBC1D3DA0A087WVF3 549 aa9.75□□□□□ -0.85
NEDD9-203ENST00000397378 TBC1D3IA0A087WXS9 549 aa9.75□□□□□ -0.85
NEDD9-203ENST00000397378 TBC1D3EA0A087X179 549 aa9.75□□□□□ -0.85
NEDD9-203ENST00000397378 TBC1D3KA0A087X1G2 549 aa9.75□□□□□ -0.85
NEDD9-203ENST00000397378 A1L4Q6 167 aa9.75□□□□□ -0.85
NEDD9-203ENST00000397378 TARSL2A2RTX5 802 aaKnown RBP9.75□□□□□ -0.85
NEDD9-203ENST00000397378 TBC1D3FA6NER0 549 aaPredicted RBP9.75□□□□□ -0.85
NEDD9-203ENST00000397378 TBC1D3LB9A6J9 549 aa9.75□□□□□ -0.85
NEDD9-203ENST00000397378 POLR2DO15514 142 aaKnown RBP9.75□□□□□ -0.85
NEDD9-203ENST00000397378 IRAK2O43187 625 aa9.75□□□□□ -0.85
NEDD9-203ENST00000397378 NOBOXO60393 691 aa9.75□□□□□ -0.85
NEDD9-203ENST00000397378 CUTAO60888 179 aa9.75□□□□□ -0.85
NEDD9-203ENST00000397378 IGLV3-27P01718 113 aa9.75□□□□□ -0.85
NEDD9-203ENST00000397378 TBC1D3HP0C7X1 549 aa9.75□□□□□ -0.85
NEDD9-203ENST00000397378 GOT1P17174 413 aa9.75□□□□□ -0.85
NEDD9-203ENST00000397378 SLC5A2P31639 672 aa9.75□□□□□ -0.85
NEDD9-203ENST00000397378 SLC8A1P32418 973 aa9.75□□□□□ -0.85
NEDD9-203ENST00000397378 NUDT1P36639 197 aa9.75□□□□□ -0.85
NEDD9-203ENST00000397378 VAMP7P51809 220 aa9.75□□□□□ -0.85
NEDD9-203ENST00000397378 ADPRHP54922 357 aa9.75□□□□□ -0.85
NEDD9-203ENST00000397378 SLC8A3P57103 927 aa9.75□□□□□ -0.85
NEDD9-203ENST00000397378 ENPEPQ07075 957 aa9.75□□□□□ -0.85
NEDD9-203ENST00000397378 OVGP1Q12889 678 aa9.75□□□□□ -0.85
NEDD9-203ENST00000397378 STK4Q13043 487 aa9.75□□□□□ -0.85
NEDD9-203ENST00000397378 CUL4BQ13620 913 aa9.75□□□□□ -0.85
NEDD9-203ENST00000397378 STAT4Q14765 748 aa9.75□□□□□ -0.85
NEDD9-203ENST00000397378 ZNF394Q53GI3 561 aa9.75□□□□□ -0.85
NEDD9-203ENST00000397378 BSPRYQ5W0U4 402 aa9.75□□□□□ -0.85
NEDD9-203ENST00000397378 CEP135Q66GS9 1140 aa9.75□□□□□ -0.85
NEDD9-203ENST00000397378 TBC1D3GQ6DHY5 549 aa9.75□□□□□ -0.85
NEDD9-203ENST00000397378 TBC1D3CQ6IPX1 549 aa9.75□□□□□ -0.85
NEDD9-203ENST00000397378 CRTC1Q6UUV9 634 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms