RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 ZNF285Q96NJ3 590 aa12.54□□□□□ -0.4
SMU1-201ENST00000397149 PCDH12Q9NPG4 1184 aa12.54□□□□□ -0.4
SMU1-201ENST00000397149 DMGDHQ9UI17 866 aaKnown RBP12.54□□□□□ -0.4
SMU1-201ENST00000397149 A0A088AWK7 358 aa12.54□□□□□ -0.4
SMU1-201ENST00000397149 BTN3A1O00481 513 aa12.54□□□□□ -0.4
SMU1-201ENST00000397149 RSL1D1O76021 490 aaKnown RBP12.54□□□□□ -0.4
SMU1-201ENST00000397149 OR56A5P0C7T3 313 aa12.54□□□□□ -0.4
SMU1-201ENST00000397149 ZNF10P21506 573 aaPredicted RBP12.54□□□□□ -0.4
SMU1-201ENST00000397149 TLX1P31314 330 aaPredicted RBP12.54□□□□□ -0.4
SMU1-201ENST00000397149 CEP68Q76N32 757 aa12.54□□□□□ -0.4
SMU1-201ENST00000397149 POU5F2Q8N7G0 328 aa12.54□□□□□ -0.4
SMU1-201ENST00000397149 SGCDQ92629 289 aa12.54□□□□□ -0.4
SMU1-201ENST00000397149 MYLPFQ96A32 169 aa12.54□□□□□ -0.4
SMU1-201ENST00000397149 COX4I2Q96KJ9 171 aa12.54□□□□□ -0.4
SMU1-201ENST00000397149 FRMD8Q9BZ67 464 aaPredicted RBP12.54□□□□□ -0.4
SMU1-201ENST00000397149 TAF6LQ9Y6J9 622 aa12.54□□□□□ -0.4
SMU1-201ENST00000397149 MAGEB2O15479 319 aa12.54□□□□□ -0.4
SMU1-201ENST00000397149 PQBP1O60828 265 aaKnown RBP12.54□□□□□ -0.4
SMU1-201ENST00000397149 CHRNA5P30532 468 aa12.54□□□□□ -0.4
SMU1-201ENST00000397149 S100A3P33764 101 aa12.54□□□□□ -0.4
SMU1-201ENST00000397149 IGFALSP35858 605 aa12.54□□□□□ -0.4
SMU1-201ENST00000397149 CLEC10AQ8IUN9 316 aa12.54□□□□□ -0.4
SMU1-201ENST00000397149 OR10H5Q8NGA6 315 aa12.54□□□□□ -0.4
SMU1-201ENST00000397149 RUBCNQ92622 972 aa12.54□□□□□ -0.4
SMU1-201ENST00000397149 LRRC40Q9H9A6 602 aa12.54□□□□□ -0.4
SMU1-201ENST00000397149 CROTQ9UKG9 612 aa12.54□□□□□ -0.4
SMU1-201ENST00000397149 IRAK3Q9Y616 596 aa12.54□□□□□ -0.4
SMU1-201ENST00000397149 CYP2C8P10632 490 aa12.54□□□□□ -0.4
SMU1-201ENST00000397149 MAN2A2P49641 1150 aa12.54□□□□□ -0.4
SMU1-201ENST00000397149 C5orf22Q49AR2 442 aa12.54□□□□□ -0.4
SMU1-201ENST00000397149 ATP13A4Q4VNC1 1196 aa12.54□□□□□ -0.4
SMU1-201ENST00000397149 LRIG3Q6UXM1 1119 aa12.54□□□□□ -0.4
SMU1-201ENST00000397149 GUF1Q8N442 669 aaKnown RBP12.54□□□□□ -0.4
SMU1-201ENST00000397149 ZNF433Q8N7K0 673 aaPredicted RBP12.54□□□□□ -0.4
SMU1-201ENST00000397149 RBM22Q9NW64 420 aaKnown RBP eCLIP12.54□□□□□ -0.4
SMU1-201ENST00000397149 NCKIPSDQ9NZQ3 722 aa12.54□□□□□ -0.4
SMU1-201ENST00000397149 ACOT9Q9Y305 439 aa12.54□□□□□ -0.4
SMU1-201ENST00000397149 HAT1O14929 419 aa12.54□□□□□ -0.4
SMU1-201ENST00000397149 MNDAP41218 407 aa12.54□□□□□ -0.4
SMU1-201ENST00000397149 ACLYP53396 1101 aa12.54□□□□□ -0.4
SMU1-201ENST00000397149 AGBL2Q5U5Z8 902 aa12.54□□□□□ -0.4
SMU1-201ENST00000397149 FBXL19Q6PCT2 694 aa12.54□□□□□ -0.4
SMU1-201ENST00000397149 FAM124AQ86V42 546 aa12.54□□□□□ -0.4
SMU1-201ENST00000397149 ADGRF2Q8IZF7 708 aa12.54□□□□□ -0.4
SMU1-201ENST00000397149 STRBPQ96SI9 672 aaKnown RBP12.54□□□□□ -0.4
SMU1-201ENST00000397149 TAGLN3Q9UI15 199 aa12.54□□□□□ -0.4
SMU1-201ENST00000397149 RIMKLBQ9ULI2 386 aa12.54□□□□□ -0.4
SMU1-201ENST00000397149 ALG6Q9Y672 507 aa12.54□□□□□ -0.4
SMU1-201ENST00000397149 TRIM38O00635 465 aa12.54□□□□□ -0.4
SMU1-201ENST00000397149 RGS14O43566 566 aa12.54□□□□□ -0.4
SMU1-201ENST00000397149 RBP1P09455 135 aa12.54□□□□□ -0.4
SMU1-201ENST00000397149 KCNA5P22460 613 aa12.54□□□□□ -0.4
SMU1-201ENST00000397149 EIF4BP23588 611 aaKnown RBP12.54□□□□□ -0.4
SMU1-201ENST00000397149 GDI2P50395 445 aaKnown RBP12.54□□□□□ -0.4
SMU1-201ENST00000397149 ADARP55265 1226 aaKnown RBP12.54□□□□□ -0.4
SMU1-201ENST00000397149 CYP4F8P98187 520 aa12.54□□□□□ -0.4
SMU1-201ENST00000397149 MPP3Q13368 585 aa12.54□□□□□ -0.4
SMU1-201ENST00000397149 TUBB3Q13509 450 aa12.54□□□□□ -0.4
SMU1-201ENST00000397149 TOR1AIP1Q5JTV8 583 aa12.54□□□□□ -0.4
SMU1-201ENST00000397149 SULT1C3Q6IMI6 304 aa12.54□□□□□ -0.4
SMU1-201ENST00000397149 PRR5LQ6MZQ0 368 aa12.54□□□□□ -0.4
SMU1-201ENST00000397149 GPR156Q8NFN8 814 aa12.54□□□□□ -0.4
SMU1-201ENST00000397149 CYP3A43Q9HB55 503 aa12.54□□□□□ -0.4
SMU1-201ENST00000397149 LAMC3Q9Y6N6 1575 aa12.53□□□□□ -0.4
SMU1-201ENST00000397149 FOXP2O15409 715 aa12.53□□□□□ -0.4
SMU1-201ENST00000397149 OR1E1P30953 314 aa12.53□□□□□ -0.4
SMU1-201ENST00000397149 SPIRE1Q08AE8 756 aa12.53□□□□□ -0.4
SMU1-201ENST00000397149 THOC7Q6I9Y2 204 aaKnown RBP12.53□□□□□ -0.4
SMU1-201ENST00000397149 CXXC5Q7LFL8 322 aaKnown RBP12.53□□□□□ -0.4
SMU1-201ENST00000397149 ZDHHC13Q8IUH4 622 aa12.53□□□□□ -0.4
SMU1-201ENST00000397149 ART5Q96L15 291 aa12.53□□□□□ -0.4
SMU1-201ENST00000397149 CST11Q9H112 138 aa12.53□□□□□ -0.4
SMU1-201ENST00000397149 CLN6Q9NWW5 311 aa12.53□□□□□ -0.4
SMU1-201ENST00000397149 NR2F1P10589 423 aa12.53□□□□□ -0.4
SMU1-201ENST00000397149 TCF4P15884 667 aa12.53□□□□□ -0.4
SMU1-201ENST00000397149 BMP7P18075 431 aa12.53□□□□□ -0.4
SMU1-201ENST00000397149 PCDH1Q08174 1060 aa12.53□□□□□ -0.4
SMU1-201ENST00000397149 ITGA9Q13797 1035 aa12.53□□□□□ -0.4
SMU1-201ENST00000397149 TRIM40Q6P9F5 258 aa12.53□□□□□ -0.4
SMU1-201ENST00000397149 USP38Q8NB14 1042 aa12.53□□□□□ -0.4
SMU1-201ENST00000397149 TMEM121Q9BTD3 319 aa12.53□□□□□ -0.4
SMU1-201ENST00000397149 PNPLA8Q9NP80 782 aa12.53□□□□□ -0.4
SMU1-201ENST00000397149 PXMP2Q9NR77 195 aa12.53□□□□□ -0.4
SMU1-201ENST00000397149 INTS7Q9NVH2 962 aaKnown RBP12.53□□□□□ -0.4
SMU1-201ENST00000397149 A0A0G2JLW4 131 aa12.53□□□□□ -0.4
SMU1-201ENST00000397149 FAM172BPA6NC97 362 aa12.53□□□□□ -0.4
SMU1-201ENST00000397149 RAG1P15918 1043 aa12.53□□□□□ -0.4
SMU1-201ENST00000397149 BUD31P41223 144 aaPredicted RBP12.53□□□□□ -0.4
SMU1-201ENST00000397149 SLC1A6P48664 564 aa12.53□□□□□ -0.4
SMU1-201ENST00000397149 HSDL1Q3SXM5 330 aa12.53□□□□□ -0.4
SMU1-201ENST00000397149 OFCC1Q8IZS5 231 aa12.53□□□□□ -0.4
SMU1-201ENST00000397149 FAM81AQ8TBF8 368 aa12.53□□□□□ -0.4
SMU1-201ENST00000397149 RERGQ96A58 199 aaPredicted RBP12.53□□□□□ -0.4
SMU1-201ENST00000397149 CXorf40BQ96DE9 158 aa12.53□□□□□ -0.4
SMU1-201ENST00000397149 RNF31Q96EP0 1072 aa12.53□□□□□ -0.4
SMU1-201ENST00000397149 C5orf34Q96MH7 638 aa12.53□□□□□ -0.4
SMU1-201ENST00000397149 HGH1Q9BTY7 390 aa12.53□□□□□ -0.4
SMU1-201ENST00000397149 EVA1BQ9NVM1 165 aa12.53□□□□□ -0.4
SMU1-201ENST00000397149 ZBTB14O43829 449 aa12.53□□□□□ -0.4
SMU1-201ENST00000397149 SERPINA1P01009 418 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms