RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 TRPC7Q9HCX4 862 aa13.66□□□□□ -0.22
SEC13-209ENST00000397117 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.66□□□□□ -0.227e-6■□□□□ 8.9
SEC13-209ENST00000397117 SLC12A6Q9UHW9 1150 aa13.66□□□□□ -0.22
SEC13-209ENST00000397117 EFR3BQ9Y2G0 817 aa13.66□□□□□ -0.22
SEC13-209ENST00000397117 CEP295Q9C0D2 2601 aa13.65□□□□□ -0.22
SEC13-209ENST00000397117 CCDC188H7C350 402 aa13.65□□□□□ -0.22
SEC13-209ENST00000397117 AXIN1O15169 862 aa13.65□□□□□ -0.22
SEC13-209ENST00000397117 TADA3O75528 432 aa13.65□□□□□ -0.22
SEC13-209ENST00000397117 F11P03951 625 aa13.65□□□□□ -0.22
SEC13-209ENST00000397117 ZNF806P0C7X5 589 aa13.65□□□□□ -0.22
SEC13-209ENST00000397117 GABRR2P28476 465 aa13.65□□□□□ -0.22
SEC13-209ENST00000397117 PMLP29590 882 aa13.65□□□□□ -0.22
SEC13-209ENST00000397117 ARSEP51690 589 aa13.65□□□□□ -0.22
SEC13-209ENST00000397117 EIF4EBP2Q13542 120 aaPredicted RBP13.65□□□□□ -0.22
SEC13-209ENST00000397117 SF3A2Q15428 464 aaKnown RBP13.65□□□□□ -0.22
SEC13-209ENST00000397117 TRIP4Q15650 581 aaPredicted RBP13.65□□□□□ -0.22
SEC13-209ENST00000397117 GPR158Q5T848 1215 aa13.65□□□□□ -0.22
SEC13-209ENST00000397117 CCDC70Q6NSX1 233 aa13.65□□□□□ -0.22
SEC13-209ENST00000397117 VSIG1Q86XK7 387 aa13.65□□□□□ -0.22
SEC13-209ENST00000397117 LRRN4CLQ8ND94 238 aa13.65□□□□□ -0.22
SEC13-209ENST00000397117 KCTD15Q96SI1 283 aaPredicted RBP13.65□□□□□ -0.22
SEC13-209ENST00000397117 ZNF670Q9BS34 389 aa13.65□□□□□ -0.22
SEC13-209ENST00000397117 ARRDC1-AS1Q9H2J1 176 aa13.65□□□□□ -0.22
SEC13-209ENST00000397117 ATXN3LQ9H3M9 355 aa13.65□□□□□ -0.22
SEC13-209ENST00000397117 ARHGEF38Q9NXL2 777 aa13.65□□□□□ -0.22
SEC13-209ENST00000397117 HBS1LQ9Y450 684 aaKnown RBP13.65□□□□□ -0.22
SEC13-209ENST00000397117 CCDC163A0A0D9SF12 145 aa13.64□□□□□ -0.23
SEC13-209ENST00000397117 TCRBV7S2A1N4TA0A589 114 aa13.64□□□□□ -0.23
SEC13-209ENST00000397117 ZNF487B1APH4 448 aa13.64□□□□□ -0.23
SEC13-209ENST00000397117 H3BRJ5 948 aa13.64□□□□□ -0.23
SEC13-209ENST00000397117 COCHO43405 550 aa13.64□□□□□ -0.23
SEC13-209ENST00000397117 PRAMEF12O95522 483 aa13.64□□□□□ -0.23
SEC13-209ENST00000397117 MOCS2O96007 188 aaPredicted RBP13.64□□□□□ -0.23
SEC13-209ENST00000397117 HMBSP08397 361 aa13.64□□□□□ -0.23
SEC13-209ENST00000397117 TNK2Q07912 1038 aa13.64□□□□□ -0.23
SEC13-209ENST00000397117 MTA1Q13330 715 aa13.64□□□□□ -0.23
SEC13-209ENST00000397117 TFDP2Q14188 446 aa13.64□□□□□ -0.23
SEC13-209ENST00000397117 TAZQ16635 292 aa13.64□□□□□ -0.23
SEC13-209ENST00000397117 ANKRD20A8PQ5CZ79 823 aa13.64□□□□□ -0.23
SEC13-209ENST00000397117 TEX35Q5T0J7 233 aa13.64□□□□□ -0.23
SEC13-209ENST00000397117 IL31Q6EBC2 164 aa13.64□□□□□ -0.23
SEC13-209ENST00000397117 PKN3Q6P5Z2 889 aa13.64□□□□□ -0.23
SEC13-209ENST00000397117 ANKS1BQ7Z6G8 1248 aa13.64□□□□□ -0.23
SEC13-209ENST00000397117 TMEM150AQ86TG1 271 aa13.64□□□□□ -0.23
SEC13-209ENST00000397117 PYROXD2Q8N2H3 581 aa13.64□□□□□ -0.23
SEC13-209ENST00000397117 FAM71BQ8TC56 605 aa13.64□□□□□ -0.23
SEC13-209ENST00000397117 BPIFB1Q8TDL5 484 aa13.64□□□□□ -0.23
SEC13-209ENST00000397117 GAB3Q8WWW8 586 aa13.64□□□□□ -0.23
SEC13-209ENST00000397117 UBXN4Q92575 508 aa13.64□□□□□ -0.23
SEC13-209ENST00000397117 HAPLN3Q96S86 360 aa13.64□□□□□ -0.23
SEC13-209ENST00000397117 TASP1Q9H6P5 420 aa13.64□□□□□ -0.23
SEC13-209ENST00000397117 IL21Q9HBE4 155 aa13.64□□□□□ -0.23
SEC13-209ENST00000397117 TMPRSS4Q9NRS4 437 aa13.64□□□□□ -0.23
SEC13-209ENST00000397117 HOMER3Q9NSC5 361 aa13.64□□□□□ -0.23
SEC13-209ENST00000397117 RXFP3Q9NSD7 469 aa13.64□□□□□ -0.23
SEC13-209ENST00000397117 RCOR3Q9P2K3 495 aaPredicted RBP13.64□□□□□ -0.23
SEC13-209ENST00000397117 ANGPTL2Q9UKU9 493 aa13.64□□□□□ -0.23
SEC13-209ENST00000397117 CFAP47Q6ZTR5 3102 aa13.64□□□□□ -0.23
SEC13-209ENST00000397117 C2orf78A6NCI8 922 aa13.64□□□□□ -0.23
SEC13-209ENST00000397117 KCNU1A8MYU2 1149 aa13.64□□□□□ -0.23
SEC13-209ENST00000397117 EEF2KO00418 725 aaKnown RBP13.64□□□□□ -0.23
SEC13-209ENST00000397117 DAPK3O43293 454 aa13.64□□□□□ -0.23
SEC13-209ENST00000397117 CREB3O43889 395 aa13.64□□□□□ -0.23
SEC13-209ENST00000397117 CST8O60676 142 aa13.64□□□□□ -0.23
SEC13-209ENST00000397117 PAGE1O75459 146 aa13.64□□□□□ -0.23
SEC13-209ENST00000397117 EPN2O95208 641 aa13.64□□□□□ -0.23
SEC13-209ENST00000397117 OAS1P00973 400 aaKnown RBP13.64□□□□□ -0.23
SEC13-209ENST00000397117 ZNF135P52742 658 aaPredicted RBP13.64□□□□□ -0.23
SEC13-209ENST00000397117 DYNLT1P63172 113 aa13.64□□□□□ -0.23
SEC13-209ENST00000397117 COG7P83436 770 aa13.64□□□□□ -0.23
SEC13-209ENST00000397117 SHC2P98077 582 aa13.64□□□□□ -0.23
SEC13-209ENST00000397117 RING1Q06587 406 aa13.64□□□□□ -0.23
SEC13-209ENST00000397117 MMRN1Q13201 1228 aa13.64□□□□□ -0.23
SEC13-209ENST00000397117 KLF1Q13351 362 aaPredicted RBP13.64□□□□□ -0.23
SEC13-209ENST00000397117 ITPRIPL2Q3MIP1 535 aa13.64□□□□□ -0.23
SEC13-209ENST00000397117 AASDHQ4L235 1098 aaPredicted RBP13.64□□□□□ -0.23
SEC13-209ENST00000397117 ARHGAP15Q53QZ3 475 aa13.64□□□□□ -0.23
SEC13-209ENST00000397117 NUGGCQ68CJ6 796 aa13.64□□□□□ -0.23
SEC13-209ENST00000397117 UNC45BQ8IWX7 931 aa13.64□□□□□ -0.23
SEC13-209ENST00000397117 KLHL7Q8IXQ5 586 aa13.64□□□□□ -0.23
SEC13-209ENST00000397117 ATP6V0D2Q8N8Y2 350 aa13.64□□□□□ -0.23
SEC13-209ENST00000397117 SLC39A13Q96H72 371 aa13.64□□□□□ -0.23
SEC13-209ENST00000397117 FCRL2Q96LA5 508 aaPredicted RBP13.64□□□□□ -0.23
SEC13-209ENST00000397117 RNF157Q96PX1 679 aa13.64□□□□□ -0.23
SEC13-209ENST00000397117 KRT12Q99456 494 aa13.64□□□□□ -0.23
SEC13-209ENST00000397117 EPAS1Q99814 870 aa13.64□□□□□ -0.23
SEC13-209ENST00000397117 HERPUD2Q9BSE4 406 aa13.64□□□□□ -0.23
SEC13-209ENST00000397117 SIK2Q9H0K1 926 aa13.64□□□□□ -0.23
SEC13-209ENST00000397117 ANLNQ9NQW6 1124 aa13.64□□□□□ -0.23
SEC13-209ENST00000397117 OR12D3Q9UGF7 316 aa13.64□□□□□ -0.23
SEC13-209ENST00000397117 MBL2P11226 248 aaPredicted RBP13.63□□□□□ -0.23
SEC13-209ENST00000397117 ZFXP17010 805 aaPredicted RBP13.63□□□□□ -0.23
SEC13-209ENST00000397117 GOT1P17174 413 aa13.63□□□□□ -0.23
SEC13-209ENST00000397117 IL4RP24394 825 aa13.63□□□□□ -0.23
SEC13-209ENST00000397117 HARS2P49590 506 aaKnown RBP13.63□□□□□ -0.23
SEC13-209ENST00000397117 TPI1P60174 286 aa13.63□□□□□ -0.23
SEC13-209ENST00000397117 CCDC6Q16204 474 aa13.63□□□□□ -0.23
SEC13-209ENST00000397117 TMEM196Q5HYL7 178 aa13.63□□□□□ -0.23
SEC13-209ENST00000397117 PLA2G2CQ5R387 149 aa13.63□□□□□ -0.23
SEC13-209ENST00000397117 TXNDC8Q6A555 127 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms