RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 HAPLN3Q96S86 360 aa15.01□□□□□ -0.01
SEC13-208ENST00000397109 ADAM33Q9BZ11 813 aa15.01□□□□□ -0.01
SEC13-208ENST00000397109 MKRN2Q9H000 416 aaKnown RBP15.01□□□□□ -0.01
SEC13-208ENST00000397109 ITM2CQ9NQX7 267 aa15.01□□□□□ -0.01
SEC13-208ENST00000397109 USP36Q9P275 1121 aaKnown RBP15.01□□□□□ -0.01
SEC13-208ENST00000397109 CDV3Q9UKY7 258 aaKnown RBP15.01□□□□□ -0.01
SEC13-208ENST00000397109 VANGL2Q9ULK5 521 aa15.01□□□□□ -0.01
SEC13-208ENST00000397109 CYP8B1Q9UNU6 501 aa15.01□□□□□ -0.01
SEC13-208ENST00000397109 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.01□□□□□ -0.01
SEC13-208ENST00000397109 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15□□□□□ -0.01
SEC13-208ENST00000397109 NDUFS2O75306 463 aa15□□□□□ -0.01
SEC13-208ENST00000397109 KRT3P12035 628 aa15□□□□□ -0.01
SEC13-208ENST00000397109 HLA-EP13747 358 aa15□□□□□ -0.01
SEC13-208ENST00000397109 PDGFRAP16234 1089 aa15□□□□□ -0.01
SEC13-208ENST00000397109 OXTRP30559 389 aa15□□□□□ -0.01
SEC13-208ENST00000397109 SDC4P31431 198 aa15□□□□□ -0.01
SEC13-208ENST00000397109 NNMTP40261 264 aa15□□□□□ -0.01
SEC13-208ENST00000397109 PLK1P53350 603 aa15□□□□□ -0.01
SEC13-208ENST00000397109 COPAP53621 1224 aa15□□□□□ -0.01
SEC13-208ENST00000397109 CDH4P55283 916 aa15□□□□□ -0.01
SEC13-208ENST00000397109 ECT2LQ008S8 904 aa15□□□□□ -0.01
SEC13-208ENST00000397109 C1QBPQ07021 282 aaKnown RBP15□□□□□ -0.01
SEC13-208ENST00000397109 ZNF177Q13360 481 aaPredicted RBP15□□□□□ -0.01
SEC13-208ENST00000397109 AASDHQ4L235 1098 aaPredicted RBP15□□□□□ -0.01
SEC13-208ENST00000397109 SFMBT2Q5VUG0 894 aa15□□□□□ -0.01
SEC13-208ENST00000397109 RNF219Q5W0B1 726 aaPredicted RBP15□□□□□ -0.01
SEC13-208ENST00000397109 E4F1Q66K89 784 aaPredicted RBP15□□□□□ -0.01
SEC13-208ENST00000397109 TRNP1Q6NT89 227 aa15□□□□□ -0.01
SEC13-208ENST00000397109 FRMD1Q8N878 549 aa15□□□□□ -0.01
SEC13-208ENST00000397109 C3orf20Q8ND61 904 aa15□□□□□ -0.01
SEC13-208ENST00000397109 NETO1Q8TDF5 533 aa15□□□□□ -0.01
SEC13-208ENST00000397109 RXFP2Q8WXD0 754 aa15□□□□□ -0.01
SEC13-208ENST00000397109 IGSF8Q969P0 613 aa15□□□□□ -0.01
SEC13-208ENST00000397109 SELENOOQ9BVL4 669 aa15□□□□□ -0.01
SEC13-208ENST00000397109 SLC6A17Q9H1V8 727 aa15□□□□□ -0.01
SEC13-208ENST00000397109 DLL3Q9NYJ7 618 aa15□□□□□ -0.01
SEC13-208ENST00000397109 C2CD4BA6NLJ0 364 aa14.99□□□□□ -0.01
SEC13-208ENST00000397109 C7P10643 843 aa14.99□□□□□ -0.01
SEC13-208ENST00000397109 CD6P30203 668 aa14.99□□□□□ -0.01
SEC13-208ENST00000397109 HOXD12P35452 270 aa14.99□□□□□ -0.01
SEC13-208ENST00000397109 PI4KAP42356 2102 aa14.99□□□□□ -0.01
SEC13-208ENST00000397109 PTPN9P43378 593 aa14.99□□□□□ -0.01
SEC13-208ENST00000397109 ADKP55263 362 aaKnown RBP14.99□□□□□ -0.01
SEC13-208ENST00000397109 ZBTB16Q05516 673 aa14.99□□□□□ -0.01
SEC13-208ENST00000397109 SF3A2Q15428 464 aaKnown RBP14.99□□□□□ -0.01
SEC13-208ENST00000397109 CCDC6Q16204 474 aa14.99□□□□□ -0.01
SEC13-208ENST00000397109 ASIC2Q16515 512 aa14.99□□□□□ -0.01
SEC13-208ENST00000397109 ARL13BQ3SXY8 428 aa14.99□□□□□ -0.01
SEC13-208ENST00000397109 LYSMD4Q5XG99 296 aa14.99□□□□□ -0.01
SEC13-208ENST00000397109 ACAD10Q6JQN1 1059 aa14.99□□□□□ -0.01
SEC13-208ENST00000397109 NYAP1Q6ZVC0 841 aa14.99□□□□□ -0.01
SEC13-208ENST00000397109 MON1BQ7L1V2 547 aa14.99□□□□□ -0.01
SEC13-208ENST00000397109 STRADAQ7RTN6 431 aa14.99□□□□□ -0.01
SEC13-208ENST00000397109 C14orf80Q86SX3 495 aa14.99□□□□□ -0.01
SEC13-208ENST00000397109 CIR1Q86X95 450 aaPredicted RBP14.99□□□□□ -0.01
SEC13-208ENST00000397109 SYT12Q8IV01 421 aa14.99□□□□□ -0.01
SEC13-208ENST00000397109 EMC1Q8N766 993 aa14.99□□□□□ -0.01
SEC13-208ENST00000397109 OR8K1Q8NGG5 319 aa14.99□□□□□ -0.01
SEC13-208ENST00000397109 CPLX3Q8WVH0 158 aa14.99□□□□□ -0.01
SEC13-208ENST00000397109 PIGKQ92643 395 aa14.99□□□□□ -0.01
SEC13-208ENST00000397109 SYT11Q9BT88 431 aa14.99□□□□□ -0.01
SEC13-208ENST00000397109 PRSS16Q9NQE7 514 aa14.99□□□□□ -0.01
SEC13-208ENST00000397109 ERVW-1Q9UQF0 538 aa14.99□□□□□ -0.01
SEC13-208ENST00000397109 CEP192Q8TEP8 1941 aa14.98□□□□□ -0.01
SEC13-208ENST00000397109 TARSL2A2RTX5 802 aaKnown RBP14.98□□□□□ -0.01
SEC13-208ENST00000397109 ANKRD62A6NC57 917 aa14.98□□□□□ -0.01
SEC13-208ENST00000397109 SIGLEC16A6NMB1 481 aa14.98□□□□□ -0.01
SEC13-208ENST00000397109 DRGXA6NNA5 263 aa14.98□□□□□ -0.01
SEC13-208ENST00000397109 KHNYNO15037 678 aaKnown RBP14.98□□□□□ -0.01
SEC13-208ENST00000397109 IGLV3-19P01714 112 aa14.98□□□□□ -0.01
SEC13-208ENST00000397109 ATXN1P54253 815 aaKnown RBP14.98□□□□□ -0.01
SEC13-208ENST00000397109 ATP11AP98196 1134 aa14.98□□□□□ -0.01
SEC13-208ENST00000397109 HNRNPA1L2Q32P51 320 aaKnown RBP14.98□□□□□ -0.01
SEC13-208ENST00000397109 CCDC14Q49A88 953 aa14.98□□□□□ -0.01
SEC13-208ENST00000397109 HGSNATQ68CP4 663 aa14.98□□□□□ -0.01
SEC13-208ENST00000397109 CXorf57Q6NSI4 855 aaKnown RBP14.98□□□□□ -0.01
SEC13-208ENST00000397109 PHLDB2Q86SQ0 1253 aa14.98□□□□□ -0.01
SEC13-208ENST00000397109 FAM131BQ86XD5 332 aa14.98□□□□□ -0.01
SEC13-208ENST00000397109 APCDD1Q8J025 514 aa14.98□□□□□ -0.01
SEC13-208ENST00000397109 ZNF366Q8N895 744 aa14.98□□□□□ -0.01
SEC13-208ENST00000397109 FOXJ1Q92949 421 aa14.98□□□□□ -0.01
SEC13-208ENST00000397109 MYO19Q96H55 970 aa14.98□□□□□ -0.01
SEC13-208ENST00000397109 VCPIP1Q96JH7 1222 aa14.98□□□□□ -0.01
SEC13-208ENST00000397109 MRGPRX3Q96LB0 322 aa14.98□□□□□ -0.01
SEC13-208ENST00000397109 RTKNQ9BST9 563 aa14.98□□□□□ -0.01
SEC13-208ENST00000397109 ANLNQ9NQW6 1124 aa14.98□□□□□ -0.01
SEC13-208ENST00000397109 ABHD10Q9NUJ1 306 aa14.98□□□□□ -0.01
SEC13-208ENST00000397109 WSB2Q9NYS7 404 aaPredicted RBP14.98□□□□□ -0.01
SEC13-208ENST00000397109 TBC1D30Q9Y2I9 924 aa14.98□□□□□ -0.01
SEC13-208ENST00000397109 BZW2Q9Y6E2 419 aaKnown RBP14.98□□□□□ -0.01
SEC13-208ENST00000397109 IGLV3-10A0A075B6K4 115 aa14.97□□□□□ -0.01
SEC13-208ENST00000397109 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.97□□□□□ -0.01
SEC13-208ENST00000397109 RNASEH1O60930 286 aaKnown RBP14.97□□□□□ -0.01
SEC13-208ENST00000397109 TNNT1P13805 278 aa14.97□□□□□ -0.01
SEC13-208ENST00000397109 DESP17661 470 aa14.97□□□□□ -0.01
SEC13-208ENST00000397109 MZF1P28698 734 aaPredicted RBP14.97□□□□□ -0.01
SEC13-208ENST00000397109 GGCXP38435 758 aa14.97□□□□□ -0.01
SEC13-208ENST00000397109 PTGER3P43115 390 aa14.97□□□□□ -0.01
SEC13-208ENST00000397109 VASPP50552 380 aaPredicted RBP14.97□□□□□ -0.01
SEC13-208ENST00000397109 TPMTP51580 245 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms