RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 FNIP1Q8TF40 1166 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 SYN2Q92777 582 aaPredicted RBP8.61□□□□□ -1.03
NDE1-202ENST00000396355 PGBD4Q96DM1 585 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 CMTM5Q96DZ9 223 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 MSANTD3Q96H12 275 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 CDK5RAP1Q96SZ6 601 aaKnown RBP8.61□□□□□ -1.03
NDE1-202ENST00000396355 CIB1Q99828 191 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 CDADC1Q9BWV3 514 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 NDFIP2Q9NV92 336 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 OGDHLQ9ULD0 1010 aa8.61□□□□□ -1.03
NDE1-202ENST00000396355 BTN3A3O00478 584 aa8.6□□□□□ -1.03
NDE1-202ENST00000396355 SORBS3O60504 671 aa8.6□□□□□ -1.03
NDE1-202ENST00000396355 TSPAN1O60635 241 aa8.6□□□□□ -1.03
NDE1-202ENST00000396355 SEC24AO95486 1093 aa8.6□□□□□ -1.03
NDE1-202ENST00000396355 GH2P01242 217 aa8.6□□□□□ -1.03
NDE1-202ENST00000396355 CYP1A2P05177 515 aa8.6□□□□□ -1.03
NDE1-202ENST00000396355 COMTP21964 271 aa8.6□□□□□ -1.03
NDE1-202ENST00000396355 WDR4P57081 412 aaKnown RBP8.6□□□□□ -1.03
NDE1-202ENST00000396355 TLR1Q15399 786 aa8.6□□□□□ -1.03
NDE1-202ENST00000396355 CLPPQ16740 277 aaPredicted RBP8.6□□□□□ -1.03
NDE1-202ENST00000396355 ZIK1Q3SY52 487 aaPredicted RBP8.6□□□□□ -1.03
NDE1-202ENST00000396355 USP43Q70EL4 1123 aa8.6□□□□□ -1.03
NDE1-202ENST00000396355 ASCC1Q8N9N2 400 aaKnown RBP8.6□□□□□ -1.03
NDE1-202ENST00000396355 BHLHE22Q8NFJ8 381 aaPredicted RBP8.6□□□□□ -1.03
NDE1-202ENST00000396355 RFFLQ8WZ73 363 aa8.6□□□□□ -1.03
NDE1-202ENST00000396355 PHF21AQ96BD5 680 aa8.6□□□□□ -1.03
NDE1-202ENST00000396355 ARHGEF26Q96DR7 871 aa8.6□□□□□ -1.03
NDE1-202ENST00000396355 SCYL1Q96KG9 808 aa8.6□□□□□ -1.03
NDE1-202ENST00000396355 PSKH2Q96QS6 385 aa8.6□□□□□ -1.03
NDE1-202ENST00000396355 IMPG2Q9BZV3 1241 aa8.6□□□□□ -1.03
NDE1-202ENST00000396355 RERGLQ9H628 205 aa8.6□□□□□ -1.03
NDE1-202ENST00000396355 NINJ2Q9NZG7 142 aa8.6□□□□□ -1.03
NDE1-202ENST00000396355 ACTR3BQ9P1U1 418 aa8.6□□□□□ -1.03
NDE1-202ENST00000396355 PSMC3IPQ9P2W1 217 aaPredicted RBP8.6□□□□□ -1.03
NDE1-202ENST00000396355 ZMYM2Q9UBW7 1377 aa8.6□□□□□ -1.03
NDE1-202ENST00000396355 FAM25AB3EWG3 89 aa8.6□□□□□ -1.03
NDE1-202ENST00000396355 FAM25CB3EWG5 89 aa8.6□□□□□ -1.03
NDE1-202ENST00000396355 FAM25GB3EWG6 89 aa8.6□□□□□ -1.03
NDE1-202ENST00000396355 ZNF806P0C7X5 589 aa8.6□□□□□ -1.03
NDE1-202ENST00000396355 IL32P24001 234 aa8.6□□□□□ -1.03
NDE1-202ENST00000396355 ARSEP51690 589 aa8.6□□□□□ -1.03
NDE1-202ENST00000396355 RAB14P61106 215 aa8.6□□□□□ -1.03
NDE1-202ENST00000396355 CAMK2BQ13554 666 aa8.6□□□□□ -1.03
NDE1-202ENST00000396355 PDIK1LQ8N165 341 aa8.6□□□□□ -1.03
NDE1-202ENST00000396355 SCFD2Q8WU76 684 aa8.6□□□□□ -1.03
NDE1-202ENST00000396355 PARK7Q99497 189 aaKnown RBP8.6□□□□□ -1.03
NDE1-202ENST00000396355 TTYH2Q9BSA4 534 aa8.6□□□□□ -1.03
NDE1-202ENST00000396355 RUSC1Q9BVN2 902 aa8.6□□□□□ -1.03
NDE1-202ENST00000396355 RIBC2Q9H4K1 309 aa8.6□□□□□ -1.03
NDE1-202ENST00000396355 SIX2Q9NPC8 291 aa8.6□□□□□ -1.03
NDE1-202ENST00000396355 MYO9BQ13459 2157 aa8.6□□□□□ -1.03
NDE1-202ENST00000396355 WDR64B1ANS9 1081 aa8.6□□□□□ -1.03
NDE1-202ENST00000396355 EML1O00423 815 aa8.6□□□□□ -1.03
NDE1-202ENST00000396355 DLL1O00548 723 aa8.6□□□□□ -1.03
NDE1-202ENST00000396355 USP2O75604 605 aaPredicted RBP8.6□□□□□ -1.03
NDE1-202ENST00000396355 ARHGEF15O94989 841 aa8.6□□□□□ -1.03
NDE1-202ENST00000396355 UCHL3P15374 230 aa8.6□□□□□ -1.03
NDE1-202ENST00000396355 ITIH2P19823 946 aa8.6□□□□□ -1.03
NDE1-202ENST00000396355 IL12AP29459 219 aa8.6□□□□□ -1.03
NDE1-202ENST00000396355 ECHS1P30084 290 aa8.6□□□□□ -1.03
NDE1-202ENST00000396355 HOXA13P31271 388 aaPredicted RBP8.6□□□□□ -1.03
NDE1-202ENST00000396355 GRIA2P42262 883 aa8.6□□□□□ -1.03
NDE1-202ENST00000396355 PEX3P56589 373 aa8.6□□□□□ -1.03
NDE1-202ENST00000396355 ABCB5Q2M3G0 1257 aa8.6□□□□□ -1.03
NDE1-202ENST00000396355 ARMC4Q5T2S8 1044 aa8.6□□□□□ -1.03
NDE1-202ENST00000396355 OTOP3Q7RTS5 596 aa8.6□□□□□ -1.03
NDE1-202ENST00000396355 PCGF5Q86SE9 256 aa8.6□□□□□ -1.03
NDE1-202ENST00000396355 SLCO6A1Q86UG4 719 aa8.6□□□□□ -1.03
NDE1-202ENST00000396355 GALNT12Q8IXK2 581 aa8.6□□□□□ -1.03
NDE1-202ENST00000396355 OFCC1Q8IZS5 231 aa8.6□□□□□ -1.03
NDE1-202ENST00000396355 CLEC4FQ8N1N0 589 aa8.6□□□□□ -1.03
NDE1-202ENST00000396355 SLC15A4Q8N697 577 aa8.6□□□□□ -1.03
NDE1-202ENST00000396355 OR8H1Q8NGG4 311 aa8.6□□□□□ -1.03
NDE1-202ENST00000396355 DEFB118Q96PH6 123 aa8.6□□□□□ -1.03
NDE1-202ENST00000396355 GMLQ99445 158 aa8.6□□□□□ -1.03
NDE1-202ENST00000396355 MECRQ9BV79 373 aa8.6□□□□□ -1.03
NDE1-202ENST00000396355 VPS11Q9H270 941 aa8.6□□□□□ -1.03
NDE1-202ENST00000396355 ANAPC7Q9UJX3 599 aa8.6□□□□□ -1.03
NDE1-202ENST00000396355 VAV3Q9UKW4 847 aa8.6□□□□□ -1.03
NDE1-202ENST00000396355 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.6□□□□□ -1.03
NDE1-202ENST00000396355 ADGRA3Q8IWK6 1321 aa8.59□□□□□ -1.03
NDE1-202ENST00000396355 FER1L6Q2WGJ9 1857 aa8.59□□□□□ -1.03
NDE1-202ENST00000396355 C16orf96A6NNT2 1141 aa8.59□□□□□ -1.03
NDE1-202ENST00000396355 PDHXO00330 501 aa8.59□□□□□ -1.03
NDE1-202ENST00000396355 VILLO15195 856 aa8.59□□□□□ -1.03
NDE1-202ENST00000396355 NDUFS2O75306 463 aa8.59□□□□□ -1.03
NDE1-202ENST00000396355 TM7SF2O76062 418 aa8.59□□□□□ -1.03
NDE1-202ENST00000396355 TFAP2AP05549 437 aa8.59□□□□□ -1.03
NDE1-202ENST00000396355 CDH2P19022 906 aaPredicted RBP8.59□□□□□ -1.03
NDE1-202ENST00000396355 PON1P27169 355 aa8.59□□□□□ -1.03
NDE1-202ENST00000396355 RPL10P27635 214 aaKnown RBP8.59□□□□□ -1.03
NDE1-202ENST00000396355 SSTR3P32745 418 aaPredicted RBP8.59□□□□□ -1.03
NDE1-202ENST00000396355 ACADVLP49748 655 aa8.59□□□□□ -1.03
NDE1-202ENST00000396355 ACOT2P49753 483 aa8.59□□□□□ -1.03
NDE1-202ENST00000396355 MYBPC1Q00872 1141 aa8.59□□□□□ -1.03
NDE1-202ENST00000396355 PAGE2Q7Z2X7 111 aa8.59□□□□□ -1.03
NDE1-202ENST00000396355 ZNF410Q86VK4 478 aa8.59□□□□□ -1.03
NDE1-202ENST00000396355 PDSS2Q86YH6 399 aa8.59□□□□□ -1.03
NDE1-202ENST00000396355 MYCT1Q8N699 235 aa8.59□□□□□ -1.03
NDE1-202ENST00000396355 FAM172AQ8WUF8 416 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms