RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 DYRK4Q9NR20 520 aa16.89■□□□□ 0.29
DDR1-229ENST00000396342 VPS28Q9UK41 221 aa16.89■□□□□ 0.29
DDR1-229ENST00000396342 CBFA2T3O75081 653 aa16.88■□□□□ 0.29
DDR1-229ENST00000396342 GABBR2O75899 941 aa16.88■□□□□ 0.29
DDR1-229ENST00000396342 F9P00740 461 aa16.88■□□□□ 0.29
DDR1-229ENST00000396342 FYNP06241 537 aa16.88■□□□□ 0.29
DDR1-229ENST00000396342 TPM2P07951 284 aa16.88■□□□□ 0.29
DDR1-229ENST00000396342 CD38P28907 300 aa16.88■□□□□ 0.29
DDR1-229ENST00000396342 HNF1BP35680 557 aa16.88■□□□□ 0.29
DDR1-229ENST00000396342 SCAPQ12770 1279 aa16.88■□□□□ 0.29
DDR1-229ENST00000396342 CAMK4Q16566 473 aa16.88■□□□□ 0.29
DDR1-229ENST00000396342 C9orf64Q5T6V5 341 aa16.88■□□□□ 0.29
DDR1-229ENST00000396342 CCNI2Q6ZMN8 369 aaPredicted RBP16.88■□□□□ 0.29
DDR1-229ENST00000396342 DEFB106AQ8N104 65 aa16.88■□□□□ 0.29
DDR1-229ENST00000396342 RPL10LQ96L21 214 aaKnown RBP16.88■□□□□ 0.29
DDR1-229ENST00000396342 MUC3BQ9H195 1237 aa16.88■□□□□ 0.29
DDR1-229ENST00000396342 ADAMTS1Q9UHI8 967 aa16.88■□□□□ 0.29
DDR1-229ENST00000396342 LHX6Q9UPM6 363 aa16.88■□□□□ 0.29
DDR1-229ENST00000396342 SLC7A4O43246 635 aa16.87■□□□□ 0.29
DDR1-229ENST00000396342 CLDN11O75508 207 aa16.87■□□□□ 0.29
DDR1-229ENST00000396342 C7P10643 843 aa16.87■□□□□ 0.29
DDR1-229ENST00000396342 BMP6P22004 513 aa16.87■□□□□ 0.29
DDR1-229ENST00000396342 RECQLP46063 649 aaPredicted RBP16.87■□□□□ 0.29
DDR1-229ENST00000396342 STAT4Q14765 748 aa16.87■□□□□ 0.29
DDR1-229ENST00000396342 FSCBQ5H9T9 825 aa16.87■□□□□ 0.29
DDR1-229ENST00000396342 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.87■□□□□ 0.29
DDR1-229ENST00000396342 MMS22LQ6ZRQ5 1243 aa16.87■□□□□ 0.29
DDR1-229ENST00000396342 PASD1Q8IV76 773 aa16.87■□□□□ 0.29
DDR1-229ENST00000396342 STK40Q8N2I9 435 aa16.87■□□□□ 0.29
DDR1-229ENST00000396342 TMEM35BQ8NCS4 154 aa16.87■□□□□ 0.29
DDR1-229ENST00000396342 C1orf131Q8NDD1 294 aaKnown RBP16.87■□□□□ 0.29
DDR1-229ENST00000396342 C1orf216Q8TAB5 229 aa16.87■□□□□ 0.29
DDR1-229ENST00000396342 ELF4Q99607 663 aaPredicted RBP16.87■□□□□ 0.29
DDR1-229ENST00000396342 C2orf49Q9BVC5 232 aaPredicted RBP16.87■□□□□ 0.29
DDR1-229ENST00000396342 TMEM121BQ9BXQ6 578 aaPredicted RBP16.87■□□□□ 0.29
DDR1-229ENST00000396342 KDM4CQ9H3R0 1056 aa16.87■□□□□ 0.29
DDR1-229ENST00000396342 MTG2Q9H4K7 406 aa16.87■□□□□ 0.29
DDR1-229ENST00000396342 SLCO3A1Q9UIG8 710 aa16.87■□□□□ 0.29
DDR1-229ENST00000396342 INTS6Q9UL03 887 aaKnown RBP16.87■□□□□ 0.29
DDR1-229ENST00000396342 PCDHGC3Q9UN70 934 aa16.87■□□□□ 0.29
DDR1-229ENST00000396342 ITIH6Q6UXX5 1313 aa16.87■□□□□ 0.29
DDR1-229ENST00000396342 ASCC3Q8N3C0 2202 aaKnown RBP16.86■□□□□ 0.29
DDR1-229ENST00000396342 H0Y8X5 98 aa16.86■□□□□ 0.29
DDR1-229ENST00000396342 BNIP3LO60238 219 aa16.86■□□□□ 0.29
DDR1-229ENST00000396342 ATXN1LP0C7T5 689 aaKnown RBP16.86■□□□□ 0.29
DDR1-229ENST00000396342 SLC9A1P19634 815 aa16.86■□□□□ 0.29
DDR1-229ENST00000396342 NOS2P35228 1153 aa16.86■□□□□ 0.29
DDR1-229ENST00000396342 CTSOP43234 321 aaPredicted RBP16.86■□□□□ 0.29
DDR1-229ENST00000396342 CTSKP43235 329 aa16.86■□□□□ 0.29
DDR1-229ENST00000396342 PROSER1Q86XN7 944 aa16.86■□□□□ 0.29
DDR1-229ENST00000396342 APCDD1Q8J025 514 aa16.86■□□□□ 0.29
DDR1-229ENST00000396342 LMLNQ96KR4 655 aa16.86■□□□□ 0.29
DDR1-229ENST00000396342 MRGPRX3Q96LB0 322 aa16.86■□□□□ 0.29
DDR1-229ENST00000396342 SLC6A18Q96N87 628 aa16.86■□□□□ 0.29
DDR1-229ENST00000396342 SIK2Q9H0K1 926 aa16.86■□□□□ 0.29
DDR1-229ENST00000396342 WDCPQ9H6R7 721 aa16.86■□□□□ 0.29
DDR1-229ENST00000396342 DNAJC12Q9UKB3 198 aa16.86■□□□□ 0.29
DDR1-229ENST00000396342 KMT2BQ9UMN6 2715 aaPredicted RBP16.85■□□□□ 0.29
DDR1-229ENST00000396342 M0QYT0 321 aa16.85■□□□□ 0.29
DDR1-229ENST00000396342 KCNK3O14649 394 aa16.85■□□□□ 0.29
DDR1-229ENST00000396342 ALOX15BO15296 676 aa16.85■□□□□ 0.29
DDR1-229ENST00000396342 GADD45BO75293 160 aaPredicted RBP16.85■□□□□ 0.29
DDR1-229ENST00000396342 GRAP2O75791 330 aa16.85■□□□□ 0.29
DDR1-229ENST00000396342 LDOC1O95751 146 aaPredicted RBP16.85■□□□□ 0.29
DDR1-229ENST00000396342 IGHV4-34P06331 123 aa16.85■□□□□ 0.29
DDR1-229ENST00000396342 MZF1P28698 734 aaPredicted RBP16.85■□□□□ 0.29
DDR1-229ENST00000396342 PLK1P53350 603 aa16.85■□□□□ 0.29
DDR1-229ENST00000396342 RNASE9P60153 205 aaKnown RBP16.85■□□□□ 0.29
DDR1-229ENST00000396342 IL9RQ01113 521 aa16.85■□□□□ 0.29
DDR1-229ENST00000396342 BNC1Q01954 994 aa16.85■□□□□ 0.29
DDR1-229ENST00000396342 SLC6A3Q01959 620 aa16.85■□□□□ 0.29
DDR1-229ENST00000396342 OVGP1Q12889 678 aa16.85■□□□□ 0.29
DDR1-229ENST00000396342 MAN2A1Q16706 1144 aa16.85■□□□□ 0.29
DDR1-229ENST00000396342 SETMARQ53H47 684 aaPredicted RBP16.85■□□□□ 0.29
DDR1-229ENST00000396342 BRMS1LQ5PSV4 323 aa16.85■□□□□ 0.29
DDR1-229ENST00000396342 NAPEPLDQ6IQ20 393 aa16.85■□□□□ 0.29
DDR1-229ENST00000396342 FBXL22Q6P050 247 aa16.85■□□□□ 0.29
DDR1-229ENST00000396342 DBX2Q6ZNG2 339 aa16.85■□□□□ 0.29
DDR1-229ENST00000396342 TMPRSS7Q7RTY8 843 aa16.85■□□□□ 0.29
DDR1-229ENST00000396342 SLCO6A1Q86UG4 719 aa16.85■□□□□ 0.29
DDR1-229ENST00000396342 SHC3Q92529 594 aa16.85■□□□□ 0.29
DDR1-229ENST00000396342 SLC2A13Q96QE2 648 aa16.85■□□□□ 0.29
DDR1-229ENST00000396342 CPXM1Q96SM3 734 aa16.85■□□□□ 0.29
DDR1-229ENST00000396342 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.85■□□□□ 0.29
DDR1-229ENST00000396342 XPO7Q9UIA9 1087 aaKnown RBP16.85■□□□□ 0.29
DDR1-229ENST00000396342 VANGL2Q9ULK5 521 aa16.85■□□□□ 0.29
DDR1-229ENST00000396342 DMTF1Q9Y222 760 aa16.85■□□□□ 0.29
DDR1-229ENST00000396342 A0A1B0GTQ1 180 aa16.84■□□□□ 0.29
DDR1-229ENST00000396342 DAB1O75553 588 aa16.84■□□□□ 0.29
DDR1-229ENST00000396342 RHOCP08134 193 aa16.84■□□□□ 0.29
DDR1-229ENST00000396342 C1SP09871 688 aa16.84■□□□□ 0.29
DDR1-229ENST00000396342 STK19P49842 368 aaPredicted RBP16.84■□□□□ 0.29
DDR1-229ENST00000396342 ADPRHP54922 357 aa16.84■□□□□ 0.29
DDR1-229ENST00000396342 CDH4P55283 916 aa16.84■□□□□ 0.29
DDR1-229ENST00000396342 AUHQ13825 339 aaKnown RBP16.84■□□□□ 0.29
DDR1-229ENST00000396342 RAPGEF1Q13905 1077 aa16.84■□□□□ 0.29
DDR1-229ENST00000396342 GJB7Q6PEY0 223 aa16.84■□□□□ 0.29
DDR1-229ENST00000396342 PDCD7Q8N8D1 485 aaKnown RBP16.84■□□□□ 0.29
DDR1-229ENST00000396342 ATP11CQ8NB49 1132 aa16.84■□□□□ 0.29
DDR1-229ENST00000396342 MYO19Q96H55 970 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms