RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 CSE1LP55060 971 aaKnown RBP3.46□□□□□ -1.86
VPS13C-203ENST00000395896 SCAPQ12770 1279 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 PRKAA1Q13131 559 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 ZNF783Q6ZMS7 281 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 CAPN12Q6ZSI9 719 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 AGGF1Q8N302 714 aaeCLIP3.46□□□□□ -1.861e-8■■■■■ 43.4
VPS13C-203ENST00000395896 FBXO36Q8NEA4 188 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 OTUB2Q96DC9 234 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 SEMA4AQ9H3S1 761 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 SIX2Q9NPC8 291 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 GCATO75600 419 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 CD52P31358 61 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 AMHR2Q16671 573 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 PMF1Q6P1K2 205 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 KLHDC10Q6PID8 442 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 E2F7Q96AV8 911 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 ULK4Q96C45 1275 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 MRRFQ96E11 262 aaKnown RBP3.46□□□□□ -1.86
VPS13C-203ENST00000395896 AGAP3Q96P47 875 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 FGFBP2Q9BYJ0 223 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 PCNX2A6NKB5 2137 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 TTLL13PA6NNM8 815 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 RHOCP08134 193 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 BDNFP23560 247 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 TNFSF9P41273 254 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 PDAP1Q13442 181 aaKnown RBP3.46□□□□□ -1.86
VPS13C-203ENST00000395896 ART3Q13508 389 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 C10orf62Q5T681 223 aaPredicted RBP3.46□□□□□ -1.86
VPS13C-203ENST00000395896 STARD8Q92502 1023 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 TMA16Q96EY4 203 aaKnown RBP3.46□□□□□ -1.86
VPS13C-203ENST00000395896 SAMD11Q96NU1 681 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 GPR63Q9BZJ6 419 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 MANSC1Q9H8J5 431 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 TMBIM4Q9HC24 238 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 SAR1AQ9NR31 198 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 TLL2Q9Y6L7 1015 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 GLP2RO95838 553 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 MOCS2O96007 188 aaPredicted RBP3.46□□□□□ -1.86
VPS13C-203ENST00000395896 RPN2P04844 631 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 PECAM1P16284 738 aaPredicted RBP3.46□□□□□ -1.86
VPS13C-203ENST00000395896 RHOQP17081 205 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 VCLP18206 1134 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 GABRB2P47870 512 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 SERPINH1P50454 418 aaKnown RBP3.46□□□□□ -1.86
VPS13C-203ENST00000395896 SOX10P56693 466 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 SNRPD1P62314 119 aaKnown RBP3.46□□□□□ -1.86
VPS13C-203ENST00000395896 STX3Q13277 289 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 MORN1Q5T089 497 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 CES5AQ6NT32 575 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 PLD5Q8N7P1 536 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 BEND7Q8N7W2 519 aaPredicted RBP3.46□□□□□ -1.86
VPS13C-203ENST00000395896 HJURPQ8NCD3 748 aaPredicted RBP3.46□□□□□ -1.86
VPS13C-203ENST00000395896 PAFAH2Q99487 392 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 ZBTB18Q99592 522 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 TRIM51Q9BSJ1 452 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 CLPBQ9H078 707 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 RRP15Q9Y3B9 282 aaKnown RBP3.46□□□□□ -1.86
VPS13C-203ENST00000395896 ANKRD36A6QL64 1941 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 PDE2AO00408 941 aaPredicted RBP3.46□□□□□ -1.86
VPS13C-203ENST00000395896 MYO1DO94832 1006 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 ZKSCAN8Q15776 578 aaPredicted RBP3.46□□□□□ -1.86
VPS13C-203ENST00000395896 LYPLAL1Q5VWZ2 237 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 PDCD6IPQ8WUM4 868 aaKnown RBP3.46□□□□□ -1.86
VPS13C-203ENST00000395896 PPP1R16AQ96I34 528 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 ULBP1Q9BZM6 244 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 ETNK1Q9HBU6 452 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.46□□□□□ -1.86
VPS13C-203ENST00000395896 AFF4Q9UHB7 1163 aaKnown RBP3.46□□□□□ -1.86
VPS13C-203ENST00000395896 ANGPTL2Q9UKU9 493 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 WNK2Q9Y3S1 2297 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 DIDO1Q9BTC0 2240 aaKnown RBP3.46□□□□□ -1.86
VPS13C-203ENST00000395896 C15orf38-AP3S2A0A0A6YYH1 394 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 TISP43B9A030 160 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 TRAFD1O14545 582 aaPredicted RBP3.46□□□□□ -1.86
VPS13C-203ENST00000395896 CSDE1O75534 798 aaKnown RBP3.46□□□□□ -1.86
VPS13C-203ENST00000395896 NOMO1Q15155 1222 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 ARPINQ7Z6K5 226 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 SNRNP25Q9BV90 132 aaKnown RBP3.46□□□□□ -1.86
VPS13C-203ENST00000395896 SMOC2Q9H3U7 446 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 PLEKHA4Q9H4M7 779 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 PRDM12Q9H4Q4 367 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 BAIAP2L1Q9UHR4 511 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.46□□□□□ -1.86
VPS13C-203ENST00000395896 CLASP2O75122 1294 aaKnown RBP3.46□□□□□ -1.86
VPS13C-203ENST00000395896 OAZ2O95190 189 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 POMCP01189 267 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 RPL21P46778 160 aaKnown RBP3.46□□□□□ -1.86
VPS13C-203ENST00000395896 JAG1P78504 1218 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 SERINC3Q13530 473 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 PDK4Q16654 411 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 HIBCHQ6NVY1 386 aaPredicted RBP3.46□□□□□ -1.86
VPS13C-203ENST00000395896 YAF2Q8IY57 180 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 C12orf29Q8N999 325 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 COLGALT1Q8NBJ5 622 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 SLC13A1Q9BZW2 595 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 SENP6Q9GZR1 1112 aaPredicted RBP3.46□□□□□ -1.86
VPS13C-203ENST00000395896 MINDY3Q9H8M7 445 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 DNAAF2Q9NVR5 837 aaKnown RBP3.46□□□□□ -1.86
VPS13C-203ENST00000395896 VPS28Q9UK41 221 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 FAM50BQ9Y247 325 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms