RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 WHRNQ9P202 907 aa20.95■□□□□ 0.94
VCPKMT-202ENST00000395860 ITIH2P19823 946 aa20.95■□□□□ 0.94
VCPKMT-202ENST00000395860 RPL22P35268 128 aaKnown RBP20.95■□□□□ 0.94
VCPKMT-202ENST00000395860 PLTPP55058 493 aa20.95■□□□□ 0.94
VCPKMT-202ENST00000395860 CDH4P55283 916 aa20.95■□□□□ 0.94
VCPKMT-202ENST00000395860 RPS24P62847 133 aaKnown RBP20.95■□□□□ 0.94
VCPKMT-202ENST00000395860 CBX2Q14781 532 aaPredicted RBP20.95■□□□□ 0.94
VCPKMT-202ENST00000395860 TTC39BQ5VTQ0 682 aaPredicted RBP20.95■□□□□ 0.94
VCPKMT-202ENST00000395860 AFMIDQ63HM1 303 aa20.95■□□□□ 0.94
VCPKMT-202ENST00000395860 GPR149Q86SP6 731 aa20.95■□□□□ 0.94
VCPKMT-202ENST00000395860 ATPAF2Q8N5M1 289 aa20.95■□□□□ 0.94
VCPKMT-202ENST00000395860 P2RY11Q96G91 374 aa20.95■□□□□ 0.94
VCPKMT-202ENST00000395860 ZSWIM3Q96MP5 696 aa20.95■□□□□ 0.94
VCPKMT-202ENST00000395860 ZNF212Q9UDV6 495 aa20.95■□□□□ 0.94
VCPKMT-202ENST00000395860 TYW5A2RUC4 315 aaKnown RBP20.94■□□□□ 0.94
VCPKMT-202ENST00000395860 STK10O94804 968 aaKnown RBP20.94■□□□□ 0.94
VCPKMT-202ENST00000395860 ECHS1P30084 290 aa20.94■□□□□ 0.94
VCPKMT-202ENST00000395860 SGSHP51688 502 aa20.94■□□□□ 0.94
VCPKMT-202ENST00000395860 BBS7Q8IWZ6 715 aa20.94■□□□□ 0.94
VCPKMT-202ENST00000395860 DEPDC1BQ8WUY9 529 aa20.94■□□□□ 0.94
VCPKMT-202ENST00000395860 HNRNPLLQ8WVV9 542 aaKnown RBP20.94■□□□□ 0.94
VCPKMT-202ENST00000395860 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.94■□□□□ 0.94
VCPKMT-202ENST00000395860 NEUROG2Q9H2A3 272 aa20.94■□□□□ 0.94
VCPKMT-202ENST00000395860 SEPT10Q9P0V9 454 aa20.94■□□□□ 0.94
VCPKMT-202ENST00000395860 PAK5Q9P286 719 aa20.94■□□□□ 0.94
VCPKMT-202ENST00000395860 COLQQ9Y215 455 aaPredicted RBP20.94■□□□□ 0.94
VCPKMT-202ENST00000395860 TMEM265A0A087WTH1 108 aa20.93■□□□□ 0.94
VCPKMT-202ENST00000395860 E2F8A0AVK6 867 aa20.93■□□□□ 0.94
VCPKMT-202ENST00000395860 CLDN11O75508 207 aa20.93■□□□□ 0.94
VCPKMT-202ENST00000395860 SEC31AO94979 1220 aaKnown RBP20.93■□□□□ 0.94
VCPKMT-202ENST00000395860 FSHRP23945 695 aa20.93■□□□□ 0.94
VCPKMT-202ENST00000395860 CHKAP35790 457 aa20.93■□□□□ 0.94
VCPKMT-202ENST00000395860 ADAM15Q13444 863 aa20.93■□□□□ 0.94
VCPKMT-202ENST00000395860 IZUMO3Q5VZ72 239 aa20.93■□□□□ 0.94
VCPKMT-202ENST00000395860 SYCE2Q6PIF2 218 aa20.93■□□□□ 0.94
VCPKMT-202ENST00000395860 CHST9Q7L1S5 443 aa20.93■□□□□ 0.94
VCPKMT-202ENST00000395860 FAM217AQ8IXS0 508 aa20.93■□□□□ 0.94
VCPKMT-202ENST00000395860 CCDC13Q8IYE1 715 aa20.93■□□□□ 0.94
VCPKMT-202ENST00000395860 TTYH1Q9H313 450 aaPredicted RBP20.93■□□□□ 0.94
VCPKMT-202ENST00000395860 NOL6Q9H6R4 1146 aaKnown RBP20.93■□□□□ 0.94
VCPKMT-202ENST00000395860 ARFGAP3Q9NP61 516 aa20.93■□□□□ 0.94
VCPKMT-202ENST00000395860 CDH23Q9H251 3354 aa20.93■□□□□ 0.94
VCPKMT-202ENST00000395860 A0A1B0GVM2 712 aa20.92■□□□□ 0.94
VCPKMT-202ENST00000395860 TCAF2A6NFQ2 919 aa20.92■□□□□ 0.94
VCPKMT-202ENST00000395860 C5orf60A6NFR6 353 aa20.92■□□□□ 0.94
VCPKMT-202ENST00000395860 ARHGAP42A6NI28 874 aa20.92■□□□□ 0.94
VCPKMT-202ENST00000395860 DNALI1O14645 258 aaPredicted RBP20.92■□□□□ 0.94
VCPKMT-202ENST00000395860 RAMP2O60895 175 aa20.92■□□□□ 0.94
VCPKMT-202ENST00000395860 PRAMEF12O95522 483 aa20.92■□□□□ 0.94
VCPKMT-202ENST00000395860 CCNCP24863 283 aa20.92■□□□□ 0.94
VCPKMT-202ENST00000395860 PAPOLAP51003 745 aaKnown RBP20.92■□□□□ 0.94
VCPKMT-202ENST00000395860 ITGA8P53708 1063 aa20.92■□□□□ 0.94
VCPKMT-202ENST00000395860 ZNF33AQ06730 810 aa20.92■□□□□ 0.94
VCPKMT-202ENST00000395860 ARHGAP36Q6ZRI8 547 aa20.92■□□□□ 0.94
VCPKMT-202ENST00000395860 LRRC49Q8IUZ0 686 aa20.92■□□□□ 0.94
VCPKMT-202ENST00000395860 ARID3BQ8IVW6 561 aaPredicted RBP20.92■□□□□ 0.94
VCPKMT-202ENST00000395860 CPXM2Q8N436 756 aa20.92■□□□□ 0.94
VCPKMT-202ENST00000395860 HJURPQ8NCD3 748 aaPredicted RBP20.92■□□□□ 0.94
VCPKMT-202ENST00000395860 CCDC110Q8TBZ0 833 aa20.92■□□□□ 0.94
VCPKMT-202ENST00000395860 AENQ8WTP8 325 aaKnown RBP20.92■□□□□ 0.94
VCPKMT-202ENST00000395860 ART4Q93070 314 aa20.92■□□□□ 0.94
VCPKMT-202ENST00000395860 TMA16Q96EY4 203 aaKnown RBP20.92■□□□□ 0.94
VCPKMT-202ENST00000395860 ZDHHC18Q9NUE0 388 aa20.92■□□□□ 0.94
VCPKMT-202ENST00000395860 ANAPC5Q9UJX4 755 aa20.92■□□□□ 0.94
VCPKMT-202ENST00000395860 TPX2Q9ULW0 747 aaKnown RBP20.92■□□□□ 0.94
VCPKMT-202ENST00000395860 CHD5Q8TDI0 1954 aa20.92■□□□□ 0.94
VCPKMT-202ENST00000395860 RASA4BC9J798 803 aa20.92■□□□□ 0.94
VCPKMT-202ENST00000395860 RNF103O00237 685 aa20.92■□□□□ 0.94
VCPKMT-202ENST00000395860 NDC80O14777 642 aa20.92■□□□□ 0.94
VCPKMT-202ENST00000395860 MTSS1O43312 755 aa20.92■□□□□ 0.94
VCPKMT-202ENST00000395860 RASA4O43374 803 aa20.92■□□□□ 0.94
VCPKMT-202ENST00000395860 GCATO75600 419 aa20.92■□□□□ 0.94
VCPKMT-202ENST00000395860 HOXB8P17481 243 aaPredicted RBP20.92■□□□□ 0.94
VCPKMT-202ENST00000395860 GRIN2CQ14957 1233 aa20.92■□□□□ 0.94
VCPKMT-202ENST00000395860 POLD3Q15054 466 aaPredicted RBP20.92■□□□□ 0.94
VCPKMT-202ENST00000395860 FAM182AQ5T1J6 154 aa20.92■□□□□ 0.94
VCPKMT-202ENST00000395860 POTEHQ6S545 545 aa20.92■□□□□ 0.94
VCPKMT-202ENST00000395860 ZDHHC24Q6UX98 284 aa20.92■□□□□ 0.94
VCPKMT-202ENST00000395860 C4orf22Q6V702 233 aa20.92■□□□□ 0.94
VCPKMT-202ENST00000395860 TAB3Q8N5C8 712 aaPredicted RBP20.92■□□□□ 0.94
VCPKMT-202ENST00000395860 TDRD5Q8NAT2 981 aaKnown RBP20.92■□□□□ 0.94
VCPKMT-202ENST00000395860 ZSCAN18Q8TBC5 510 aaPredicted RBP20.92■□□□□ 0.94
VCPKMT-202ENST00000395860 FBXO25Q8TCJ0 367 aa20.92■□□□□ 0.94
VCPKMT-202ENST00000395860 TSGA13Q96PP4 275 aa20.92■□□□□ 0.94
VCPKMT-202ENST00000395860 FAM129AQ9BZQ8 928 aa20.92■□□□□ 0.94
VCPKMT-202ENST00000395860 A0A0A0MRY4 1105 aa20.91■□□□□ 0.94
VCPKMT-202ENST00000395860 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.91■□□□□ 0.94
VCPKMT-202ENST00000395860 KCNK1O00180 336 aa20.91■□□□□ 0.94
VCPKMT-202ENST00000395860 TBL1XO60907 577 aa20.91■□□□□ 0.94
VCPKMT-202ENST00000395860 YBEYP58557 167 aaPredicted RBP20.91■□□□□ 0.94
VCPKMT-202ENST00000395860 CAV1Q03135 178 aa20.91■□□□□ 0.94
VCPKMT-202ENST00000395860 ZNF177Q13360 481 aaPredicted RBP20.91■□□□□ 0.94
VCPKMT-202ENST00000395860 PARP15Q460N3 678 aa20.91■□□□□ 0.94
VCPKMT-202ENST00000395860 ANKRD20A2Q5SQ80 823 aa20.91■□□□□ 0.94
VCPKMT-202ENST00000395860 C6orf118Q5T5N4 469 aa20.91■□□□□ 0.94
VCPKMT-202ENST00000395860 ANKRD20A1Q5TYW2 823 aa20.91■□□□□ 0.94
VCPKMT-202ENST00000395860 ANKRD20A3Q5VUR7 823 aa20.91■□□□□ 0.94
VCPKMT-202ENST00000395860 TIGD7Q6NT04 549 aaPredicted RBP20.91■□□□□ 0.94
VCPKMT-202ENST00000395860 ARHGEF18Q6ZSZ5 1173 aa20.91■□□□□ 0.94
VCPKMT-202ENST00000395860 GET4Q7L5D6 327 aaPredicted RBP20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms