RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 CNTN5O94779 1100 aa16.67■□□□□ 0.26
CXCL12-206ENST00000395795 GNSP15586 552 aa16.67■□□□□ 0.26
CXCL12-206ENST00000395795 FLT3P36888 993 aa16.67■□□□□ 0.26
CXCL12-206ENST00000395795 JAM2P57087 298 aa16.67■□□□□ 0.26
CXCL12-206ENST00000395795 BPIFB4P59827 614 aa16.67■□□□□ 0.26
CXCL12-206ENST00000395795 NOMO3P69849 1222 aa16.67■□□□□ 0.26
CXCL12-206ENST00000395795 FOXC1Q12948 553 aa16.67■□□□□ 0.26
CXCL12-206ENST00000395795 NME3Q13232 169 aa16.67■□□□□ 0.26
CXCL12-206ENST00000395795 SLC14A1Q13336 389 aa16.67■□□□□ 0.26
CXCL12-206ENST00000395795 ALFQ53S48 1182 aa16.67■□□□□ 0.26
CXCL12-206ENST00000395795 TAF3Q5VWG9 929 aa16.67■□□□□ 0.26
CXCL12-206ENST00000395795 LAYNQ6UX15 382 aa16.67■□□□□ 0.26
CXCL12-206ENST00000395795 APTXQ7Z2E3 356 aaKnown RBP16.67■□□□□ 0.26
CXCL12-206ENST00000395795 ZDHHC17Q8IUH5 632 aa16.67■□□□□ 0.26
CXCL12-206ENST00000395795 MMAAQ8IVH4 418 aaKnown RBP16.67■□□□□ 0.26
CXCL12-206ENST00000395795 STK40Q8N2I9 435 aa16.67■□□□□ 0.26
CXCL12-206ENST00000395795 SLC20A1Q8WUM9 679 aa16.67■□□□□ 0.26
CXCL12-206ENST00000395795 GATA6Q92908 595 aa16.67■□□□□ 0.26
CXCL12-206ENST00000395795 NOX5Q96PH1 765 aa16.67■□□□□ 0.26
CXCL12-206ENST00000395795 TBCBQ99426 244 aa16.67■□□□□ 0.26
CXCL12-206ENST00000395795 PSMB7Q99436 277 aa16.67■□□□□ 0.26
CXCL12-206ENST00000395795 FEM1AQ9BSK4 669 aa16.67■□□□□ 0.26
CXCL12-206ENST00000395795 ZDHHC5Q9C0B5 715 aa16.67■□□□□ 0.26
CXCL12-206ENST00000395795 NEUROG2Q9H2A3 272 aa16.67■□□□□ 0.26
CXCL12-206ENST00000395795 SGK2Q9HBY8 427 aa16.67■□□□□ 0.26
CXCL12-206ENST00000395795 ZNF212Q9UDV6 495 aa16.67■□□□□ 0.26
CXCL12-206ENST00000395795 DACH1Q9UI36 760 aa16.67■□□□□ 0.26
CXCL12-206ENST00000395795 VANGL2Q9ULK5 521 aa16.67■□□□□ 0.26
CXCL12-206ENST00000395795 TBC1D30Q9Y2I9 924 aa16.67■□□□□ 0.26
CXCL12-206ENST00000395795 SIK3Q9Y2K2 1263 aa16.67■□□□□ 0.26
CXCL12-206ENST00000395795 CABIN1Q9Y6J0 2220 aa16.66■□□□□ 0.26
CXCL12-206ENST00000395795 EDDM13A0A1B0GTR0 161 aa16.66■□□□□ 0.26
CXCL12-206ENST00000395795 TYW5A2RUC4 315 aaKnown RBP16.66■□□□□ 0.26
CXCL12-206ENST00000395795 C1QTNF9BB2RNN3 333 aa16.66■□□□□ 0.26
CXCL12-206ENST00000395795 DNTTP04053 509 aa16.66■□□□□ 0.26
CXCL12-206ENST00000395795 MMEP08473 750 aa16.66■□□□□ 0.26
CXCL12-206ENST00000395795 C1QTNF9P0C862 333 aa16.66■□□□□ 0.26
CXCL12-206ENST00000395795 ABCB4P21439 1286 aa16.66■□□□□ 0.26
CXCL12-206ENST00000395795 DRD3P35462 400 aa16.66■□□□□ 0.26
CXCL12-206ENST00000395795 CSNK1EP49674 416 aaKnown RBP16.66■□□□□ 0.26
CXCL12-206ENST00000395795 ATXN3P54252 364 aaPredicted RBP16.66■□□□□ 0.26
CXCL12-206ENST00000395795 GALCP54803 685 aa16.66■□□□□ 0.26
CXCL12-206ENST00000395795 SLC12A1Q13621 1099 aa16.66■□□□□ 0.26
CXCL12-206ENST00000395795 KIF19Q2TAC6 998 aa16.66■□□□□ 0.26
CXCL12-206ENST00000395795 HLA-BQ31612 363 aa16.66■□□□□ 0.26
CXCL12-206ENST00000395795 RAB6CQ53S08 254 aa16.66■□□□□ 0.26
CXCL12-206ENST00000395795 TTC39BQ5VTQ0 682 aaPredicted RBP16.66■□□□□ 0.26
CXCL12-206ENST00000395795 HDDC3Q8N4P3 179 aa16.66■□□□□ 0.26
CXCL12-206ENST00000395795 TMEM35BQ8NCS4 154 aa16.66■□□□□ 0.26
CXCL12-206ENST00000395795 BAHD1Q8TBE0 780 aaPredicted RBP16.66■□□□□ 0.26
CXCL12-206ENST00000395795 SCNM1Q9BWG6 230 aa16.66■□□□□ 0.26
CXCL12-206ENST00000395795 RAB6CQ9H0N0 254 aa16.66■□□□□ 0.26
CXCL12-206ENST00000395795 TM9SF3Q9HD45 589 aa16.66■□□□□ 0.26
CXCL12-206ENST00000395795 FANCLQ9NW38 375 aa16.66■□□□□ 0.26
CXCL12-206ENST00000395795 FBXL12Q9NXK8 326 aa16.66■□□□□ 0.26
CXCL12-206ENST00000395795 A0A1W2PP55 124 aa16.65■□□□□ 0.26
CXCL12-206ENST00000395795 DRGXA6NNA5 263 aa16.65■□□□□ 0.26
CXCL12-206ENST00000395795 WNT9AO14904 365 aa16.65■□□□□ 0.26
CXCL12-206ENST00000395795 ATP9BO43861 1147 aa16.65■□□□□ 0.26
CXCL12-206ENST00000395795 LSM8O95777 96 aaKnown RBP16.65■□□□□ 0.26
CXCL12-206ENST00000395795 CYP1A1P04798 512 aaPredicted RBP16.65■□□□□ 0.26
CXCL12-206ENST00000395795 ZNF883P0CG24 379 aa16.65■□□□□ 0.26
CXCL12-206ENST00000395795 CD27P26842 260 aa16.65■□□□□ 0.26
CXCL12-206ENST00000395795 ST8SIA6P61647 398 aa16.65■□□□□ 0.26
CXCL12-206ENST00000395795 SIM1P81133 766 aaPredicted RBP16.65■□□□□ 0.26
CXCL12-206ENST00000395795 FMO1Q01740 532 aa16.65■□□□□ 0.26
CXCL12-206ENST00000395795 NCAPHQ15003 741 aa16.65■□□□□ 0.26
CXCL12-206ENST00000395795 KIAA0895LQ68EN5 471 aa16.65■□□□□ 0.26
CXCL12-206ENST00000395795 C18orf8Q96DM3 657 aa16.65■□□□□ 0.26
CXCL12-206ENST00000395795 RPRD1AQ96P16 312 aaPredicted RBP16.65■□□□□ 0.26
CXCL12-206ENST00000395795 VPS16Q9H269 839 aa16.65■□□□□ 0.26
CXCL12-206ENST00000395795 SLC32A1Q9H598 525 aa16.65■□□□□ 0.26
CXCL12-206ENST00000395795 GAREM1Q9H706 876 aa16.65■□□□□ 0.26
CXCL12-206ENST00000395795 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.65■□□□□ 0.26
CXCL12-206ENST00000395795 SLC12A6Q9UHW9 1150 aa16.65■□□□□ 0.26
CXCL12-206ENST00000395795 SARDHQ9UL12 918 aa16.65■□□□□ 0.26
CXCL12-206ENST00000395795 SCML1Q9UN30 329 aa16.65■□□□□ 0.26
CXCL12-206ENST00000395795 SNX11Q9Y5W9 270 aa16.65■□□□□ 0.26
CXCL12-206ENST00000395795 IGLV3-10A0A075B6K4 115 aa16.64■□□□□ 0.25
CXCL12-206ENST00000395795 RNF103O00237 685 aa16.64■□□□□ 0.25
CXCL12-206ENST00000395795 HYAL3O43820 417 aaPredicted RBP16.64■□□□□ 0.25
CXCL12-206ENST00000395795 MOCS3O95396 460 aa16.64■□□□□ 0.25
CXCL12-206ENST00000395795 WNT1P04628 370 aa16.64■□□□□ 0.25
CXCL12-206ENST00000395795 SLC8A1P32418 973 aa16.64■□□□□ 0.25
CXCL12-206ENST00000395795 GRIA4P48058 902 aa16.64■□□□□ 0.25
CXCL12-206ENST00000395795 RNASE9P60153 205 aaKnown RBP16.64■□□□□ 0.25
CXCL12-206ENST00000395795 PTP4A2Q12974 167 aa16.64■□□□□ 0.25
CXCL12-206ENST00000395795 ST3GAL2Q16842 350 aa16.64■□□□□ 0.25
CXCL12-206ENST00000395795 SLC25A52Q3SY17 297 aa16.64■□□□□ 0.25
CXCL12-206ENST00000395795 TTC31Q49AM3 519 aaPredicted RBP16.64■□□□□ 0.25
CXCL12-206ENST00000395795 RABGAP1LQ5R372 815 aa16.64■□□□□ 0.25
CXCL12-206ENST00000395795 NCEH1Q6PIU2 408 aa16.64■□□□□ 0.25
CXCL12-206ENST00000395795 ERICH1Q86X53 443 aa16.64■□□□□ 0.25
CXCL12-206ENST00000395795 NAXDQ8IW45 347 aa16.64■□□□□ 0.25
CXCL12-206ENST00000395795 CPA5Q8WXQ8 436 aa16.64■□□□□ 0.25
CXCL12-206ENST00000395795 RNF34Q969K3 372 aa16.64■□□□□ 0.25
CXCL12-206ENST00000395795 PCDHB18PQ96TA0 734 aa16.64■□□□□ 0.25
CXCL12-206ENST00000395795 TKTL2Q9H0I9 626 aa16.64■□□□□ 0.25
CXCL12-206ENST00000395795 RRN3Q9NYV6 651 aa16.64■□□□□ 0.25
CXCL12-206ENST00000395795 PCOLCE2Q9UKZ9 415 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms