RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 PPP1R13LQ8WUF5 828 aa14.64□□□□□ -0.07
CLIP2-203ENST00000395060 CIB1Q99828 191 aa14.64□□□□□ -0.07
CLIP2-203ENST00000395060 GATA5Q9BWX5 397 aaPredicted RBP14.64□□□□□ -0.07
CLIP2-203ENST00000395060 LHX5Q9H2C1 402 aa14.64□□□□□ -0.07
CLIP2-203ENST00000395060 DCDC2Q9UHG0 476 aa14.64□□□□□ -0.07
CLIP2-203ENST00000395060 DESP17661 470 aa14.63□□□□□ -0.07
CLIP2-203ENST00000395060 ADORA2BP29275 332 aa14.63□□□□□ -0.07
CLIP2-203ENST00000395060 ZBTB8OSQ8IWT0 167 aa14.63□□□□□ -0.07
CLIP2-203ENST00000395060 LRTOMTQ8WZ04 291 aa14.63□□□□□ -0.07
CLIP2-203ENST00000395060 MFSD3Q96ES6 412 aa14.63□□□□□ -0.07
CLIP2-203ENST00000395060 HPDLQ96IR7 371 aa14.63□□□□□ -0.07
CLIP2-203ENST00000395060 TASP1Q9H6P5 420 aa14.63□□□□□ -0.07
CLIP2-203ENST00000395060 WDR41Q9HAD4 459 aa14.63□□□□□ -0.07
CLIP2-203ENST00000395060 DTLQ9NZJ0 730 aa14.63□□□□□ -0.07
CLIP2-203ENST00000395060 GPR25O00155 361 aa14.63□□□□□ -0.07
CLIP2-203ENST00000395060 PIGNO95427 931 aa14.63□□□□□ -0.07
CLIP2-203ENST00000395060 PDGFRBP09619 1106 aa14.63□□□□□ -0.07
CLIP2-203ENST00000395060 RABGGTBP53611 331 aa14.63□□□□□ -0.07
CLIP2-203ENST00000395060 C16orf72Q14CZ0 275 aa14.63□□□□□ -0.07
CLIP2-203ENST00000395060 CDKL3Q8IVW4 592 aaPredicted RBP14.63□□□□□ -0.07
CLIP2-203ENST00000395060 SULF1Q8IWU6 871 aa14.63□□□□□ -0.07
CLIP2-203ENST00000395060 MARVELD2Q8N4S9 558 aa14.63□□□□□ -0.07
CLIP2-203ENST00000395060 GAB3Q8WWW8 586 aa14.63□□□□□ -0.07
CLIP2-203ENST00000395060 NLRP7Q8WX94 980 aa14.63□□□□□ -0.07
CLIP2-203ENST00000395060 FAM149B1Q96BN6 582 aa14.63□□□□□ -0.07
CLIP2-203ENST00000395060 CXCL16Q9H2A7 254 aa14.63□□□□□ -0.07
CLIP2-203ENST00000395060 DNAJC28Q9NX36 388 aa14.63□□□□□ -0.07
CLIP2-203ENST00000395060 STK39Q9UEW8 545 aa14.63□□□□□ -0.07
CLIP2-203ENST00000395060 AP4E1Q9UPM8 1137 aa14.63□□□□□ -0.07
CLIP2-203ENST00000395060 SORCS3Q9UPU3 1222 aa14.63□□□□□ -0.07
CLIP2-203ENST00000395060 SNX9Q9Y5X1 595 aa14.63□□□□□ -0.07
CLIP2-203ENST00000395060 RNF103O00237 685 aa14.62□□□□□ -0.07
CLIP2-203ENST00000395060 PLOD2O00469 737 aa14.62□□□□□ -0.07
CLIP2-203ENST00000395060 CILPO75339 1184 aa14.62□□□□□ -0.07
CLIP2-203ENST00000395060 IQCF3P0C7M6 154 aa14.62□□□□□ -0.07
CLIP2-203ENST00000395060 CKMT2P17540 419 aa14.62□□□□□ -0.07
CLIP2-203ENST00000395060 PSMC3P17980 439 aa14.62□□□□□ -0.07
CLIP2-203ENST00000395060 UBA1P22314 1058 aaKnown RBP14.62□□□□□ -0.07
CLIP2-203ENST00000395060 KRT80Q6KB66 452 aa14.62□□□□□ -0.07
CLIP2-203ENST00000395060 GK5Q6ZS86 529 aa14.62□□□□□ -0.07
CLIP2-203ENST00000395060 LPCAT2Q7L5N7 544 aa14.62□□□□□ -0.07
CLIP2-203ENST00000395060 PID1Q7Z2X4 250 aa14.62□□□□□ -0.07
CLIP2-203ENST00000395060 ZNF280CQ8ND82 737 aa14.62□□□□□ -0.07
CLIP2-203ENST00000395060 HTR3CQ8WXA8 447 aa14.62□□□□□ -0.07
CLIP2-203ENST00000395060 BTBD9Q96Q07 612 aa14.62□□□□□ -0.07
CLIP2-203ENST00000395060 COQ10BQ9H8M1 238 aa14.62□□□□□ -0.07
CLIP2-203ENST00000395060 LOXHD1Q8IVV2 1947 aa14.62□□□□□ -0.07
CLIP2-203ENST00000395060 BCLAF3A2AJT9 711 aaKnown RBP14.62□□□□□ -0.07
CLIP2-203ENST00000395060 C7orf72A4D263 438 aa14.62□□□□□ -0.07
CLIP2-203ENST00000395060 SPATA31C2B4DYI2 1134 aa14.62□□□□□ -0.07
CLIP2-203ENST00000395060 PIGRP01833 764 aa14.62□□□□□ -0.07
CLIP2-203ENST00000395060 EPHX2P34913 555 aa14.62□□□□□ -0.07
CLIP2-203ENST00000395060 CCR3P51677 355 aa14.62□□□□□ -0.07
CLIP2-203ENST00000395060 ANKDD1AQ495B1 522 aa14.62□□□□□ -0.07
CLIP2-203ENST00000395060 MTX3Q5HYI7 312 aa14.62□□□□□ -0.07
CLIP2-203ENST00000395060 SH2D4BQ5SQS7 431 aa14.62□□□□□ -0.07
CLIP2-203ENST00000395060 FSTL4Q6MZW2 842 aa14.62□□□□□ -0.07
CLIP2-203ENST00000395060 KDELC2Q7Z4H8 507 aa14.62□□□□□ -0.07
CLIP2-203ENST00000395060 SLC39A3Q9BRY0 314 aa14.62□□□□□ -0.07
CLIP2-203ENST00000395060 TMEM79Q9BSE2 394 aa14.62□□□□□ -0.07
CLIP2-203ENST00000395060 MAFBQ9Y5Q3 323 aaPredicted RBP14.62□□□□□ -0.07
CLIP2-203ENST00000395060 ZSCAN9O15535 394 aaPredicted RBP14.61□□□□□ -0.07
CLIP2-203ENST00000395060 PTPRAP18433 802 aa14.61□□□□□ -0.07
CLIP2-203ENST00000395060 GRK2P25098 689 aa14.61□□□□□ -0.07
CLIP2-203ENST00000395060 NME5P56597 212 aa14.61□□□□□ -0.07
CLIP2-203ENST00000395060 TMEM259Q4ZIN3 620 aa14.61□□□□□ -0.07
CLIP2-203ENST00000395060 BOLA3Q53S33 107 aa14.61□□□□□ -0.07
CLIP2-203ENST00000395060 ARL13AQ5H913 290 aaPredicted RBP14.61□□□□□ -0.07
CLIP2-203ENST00000395060 KLHL35Q6PF15 583 aa14.61□□□□□ -0.07
CLIP2-203ENST00000395060 EPGNQ6UW88 154 aa14.61□□□□□ -0.07
CLIP2-203ENST00000395060 NCAPG2Q86XI2 1143 aa14.61□□□□□ -0.07
CLIP2-203ENST00000395060 TSPAN14Q8NG11 270 aa14.61□□□□□ -0.07
CLIP2-203ENST00000395060 ARNTL2Q8WYA1 636 aa14.61□□□□□ -0.07
CLIP2-203ENST00000395060 SERPINI1Q99574 410 aa14.61□□□□□ -0.07
CLIP2-203ENST00000395060 FERMT1Q9BQL6 677 aa14.61□□□□□ -0.07
CLIP2-203ENST00000395060 RTKNQ9BST9 563 aa14.61□□□□□ -0.07
CLIP2-203ENST00000395060 CCDC28BQ9BUN5 200 aa14.61□□□□□ -0.07
CLIP2-203ENST00000395060 CDT1Q9H211 546 aa14.61□□□□□ -0.07
CLIP2-203ENST00000395060 IL1RL2Q9HB29 575 aa14.61□□□□□ -0.07
CLIP2-203ENST00000395060 NRBP2Q9NSY0 501 aa14.61□□□□□ -0.07
CLIP2-203ENST00000395060 ZDHHC2Q9UIJ5 367 aa14.61□□□□□ -0.07
CLIP2-203ENST00000395060 CDY2AQ9Y6F7 541 aa14.61□□□□□ -0.07
CLIP2-203ENST00000395060 CDY1Q9Y6F8 540 aa14.61□□□□□ -0.07
CLIP2-203ENST00000395060 ZNF646O15015 1829 aaPredicted RBP14.61□□□□□ -0.07
CLIP2-203ENST00000395060 CROCCQ5TZA2 2017 aa14.61□□□□□ -0.07
CLIP2-203ENST00000395060 MFSD11O43934 449 aa14.61□□□□□ -0.07
CLIP2-203ENST00000395060 ENDOD1O94919 500 aa14.61□□□□□ -0.07
CLIP2-203ENST00000395060 CLIC3O95833 236 aa14.61□□□□□ -0.07
CLIP2-203ENST00000395060 TGM2P21980 687 aa14.61□□□□□ -0.07
CLIP2-203ENST00000395060 PITX1P78337 314 aaPredicted RBP14.61□□□□□ -0.07
CLIP2-203ENST00000395060 STXBP2Q15833 593 aa14.61□□□□□ -0.07
CLIP2-203ENST00000395060 KLC3Q6P597 504 aa14.61□□□□□ -0.07
CLIP2-203ENST00000395060 ZNF410Q86VK4 478 aa14.61□□□□□ -0.07
CLIP2-203ENST00000395060 TRPM4Q8TD43 1214 aa14.61□□□□□ -0.07
CLIP2-203ENST00000395060 PDCD6IPQ8WUM4 868 aaKnown RBP14.61□□□□□ -0.07
CLIP2-203ENST00000395060 KCTD15Q96SI1 283 aaPredicted RBP14.61□□□□□ -0.07
CLIP2-203ENST00000395060 APBA2Q99767 749 aa14.61□□□□□ -0.07
CLIP2-203ENST00000395060 MRPS26Q9BYN8 205 aaKnown RBP14.61□□□□□ -0.07
CLIP2-203ENST00000395060 C6orf203Q9P0P8 240 aaPredicted RBP14.61□□□□□ -0.07
CLIP2-203ENST00000395060 EPS15L1Q9UBC2 864 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 197.1 ms