RNA–Protein interactions for RNA: ENST00000394961.6

SMARCAD1-203, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2

Gene SMARCAD1, Length 3,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-203ENST00000394961 HAPLN3Q96S86 360 aa6.43□□□□□ -1.38
SMARCAD1-203ENST00000394961 SLC6A17Q9H1V8 727 aa6.43□□□□□ -1.38
SMARCAD1-203ENST00000394961 SLC12A6Q9UHW9 1150 aa6.43□□□□□ -1.38
SMARCAD1-203ENST00000394961 EIF2B4Q9UI10 523 aaKnown RBP6.43□□□□□ -1.38
SMARCAD1-203ENST00000394961 CIZ1Q9ULV3 898 aaPredicted RBP6.43□□□□□ -1.38
SMARCAD1-203ENST00000394961 CFAP54Q96N23 3096 aa6.43□□□□□ -1.38
SMARCAD1-203ENST00000394961 CFAP69A5D8W1 941 aa6.42□□□□□ -1.38
SMARCAD1-203ENST00000394961 H0Y8X5 98 aa6.42□□□□□ -1.38
SMARCAD1-203ENST00000394961 TPP1O14773 563 aa6.42□□□□□ -1.38
SMARCAD1-203ENST00000394961 F9P00740 461 aa6.42□□□□□ -1.38
SMARCAD1-203ENST00000394961 HTR7P34969 479 aa6.42□□□□□ -1.38
SMARCAD1-203ENST00000394961 YWHAZP63104 245 aaKnown RBP6.42□□□□□ -1.38
SMARCAD1-203ENST00000394961 ARID5AQ03989 594 aa6.42□□□□□ -1.38
SMARCAD1-203ENST00000394961 TMEM259Q4ZIN3 620 aa6.42□□□□□ -1.38
SMARCAD1-203ENST00000394961 SETMARQ53H47 684 aaPredicted RBP6.42□□□□□ -1.38
SMARCAD1-203ENST00000394961 AGBL4Q5VU57 503 aa6.42□□□□□ -1.38
SMARCAD1-203ENST00000394961 KIAA1161Q6NSJ0 714 aa6.42□□□□□ -1.38
SMARCAD1-203ENST00000394961 OLFML1Q6UWY5 402 aa6.42□□□□□ -1.38
SMARCAD1-203ENST00000394961 KYAT3Q6YP21 454 aaKnown RBP6.42□□□□□ -1.38
SMARCAD1-203ENST00000394961 RGL4Q8IZJ4 473 aa6.42□□□□□ -1.38
SMARCAD1-203ENST00000394961 SH2D3CQ8N5H7 860 aa6.42□□□□□ -1.38
SMARCAD1-203ENST00000394961 DCAF4L2Q8NA75 395 aa6.42□□□□□ -1.38
SMARCAD1-203ENST00000394961 RAB7BQ96AH8 199 aa6.42□□□□□ -1.38
SMARCAD1-203ENST00000394961 NPY6RQ99463 290 aa6.42□□□□□ -1.38
SMARCAD1-203ENST00000394961 INTS2Q9H0H0 1204 aaKnown RBP6.42□□□□□ -1.38
SMARCAD1-203ENST00000394961 IL21RQ9HBE5 538 aa6.42□□□□□ -1.38
SMARCAD1-203ENST00000394961 CEP250Q9BV73 2442 aa6.42□□□□□ -1.38
SMARCAD1-203ENST00000394961 PCNX2A6NKB5 2137 aa6.42□□□□□ -1.38
SMARCAD1-203ENST00000394961 TSPAN11A1L157 253 aa6.42□□□□□ -1.38
SMARCAD1-203ENST00000394961 C1QTNF3-AMACRE9PGA6 284 aa6.42□□□□□ -1.38
SMARCAD1-203ENST00000394961 TLR4O00206 839 aa6.42□□□□□ -1.38
SMARCAD1-203ENST00000394961 LDOC1O95751 146 aaPredicted RBP6.42□□□□□ -1.38
SMARCAD1-203ENST00000394961 HLA-EP13747 358 aa6.42□□□□□ -1.38
SMARCAD1-203ENST00000394961 NOS2P35228 1153 aa6.42□□□□□ -1.38
SMARCAD1-203ENST00000394961 EIF2S3P41091 472 aaKnown RBP6.42□□□□□ -1.38
SMARCAD1-203ENST00000394961 UCNP55089 124 aa6.42□□□□□ -1.38
SMARCAD1-203ENST00000394961 ERVPABLB-1P60509 514 aa6.42□□□□□ -1.38
SMARCAD1-203ENST00000394961 OTUD1Q5VV17 481 aaPredicted RBP6.42□□□□□ -1.38
SMARCAD1-203ENST00000394961 ZNF677Q86XU0 584 aa6.42□□□□□ -1.38
SMARCAD1-203ENST00000394961 OR8D1Q8WZ84 308 aa6.42□□□□□ -1.38
SMARCAD1-203ENST00000394961 SPOCK2Q92563 424 aa6.42□□□□□ -1.38
SMARCAD1-203ENST00000394961 ZNF578Q96N58 590 aaPredicted RBP6.42□□□□□ -1.38
SMARCAD1-203ENST00000394961 PSMB7Q99436 277 aa6.42□□□□□ -1.38
SMARCAD1-203ENST00000394961 GDF3Q9NR23 364 aa6.42□□□□□ -1.38
SMARCAD1-203ENST00000394961 NLGN3Q9NZ94 848 aa6.42□□□□□ -1.38
SMARCAD1-203ENST00000394961 SFMBT1Q9UHJ3 866 aa6.42□□□□□ -1.38
SMARCAD1-203ENST00000394961 PCDHB4Q9Y5E5 795 aa6.42□□□□□ -1.38
SMARCAD1-203ENST00000394961 ANKRD36A6QL64 1941 aa6.42□□□□□ -1.38
SMARCAD1-203ENST00000394961 USP24Q9UPU5 2620 aa6.42□□□□□ -1.38
SMARCAD1-203ENST00000394961 M0QYV0 167 aa6.42□□□□□ -1.38
SMARCAD1-203ENST00000394961 CKMT1AP12532 417 aa6.42□□□□□ -1.38
SMARCAD1-203ENST00000394961 CKMT2P17540 419 aa6.42□□□□□ -1.38
SMARCAD1-203ENST00000394961 WASP42768 502 aa6.42□□□□□ -1.38
SMARCAD1-203ENST00000394961 C21orf59P57076 290 aa6.42□□□□□ -1.38
SMARCAD1-203ENST00000394961 BPIFB4P59827 614 aa6.42□□□□□ -1.38
SMARCAD1-203ENST00000394961 PDCLQ13371 301 aa6.42□□□□□ -1.38
SMARCAD1-203ENST00000394961 PNOCQ13519 176 aa6.42□□□□□ -1.38
SMARCAD1-203ENST00000394961 MANEALQ5VSG8 457 aa6.42□□□□□ -1.38
SMARCAD1-203ENST00000394961 C11orf57Q6ZUT1 292 aaPredicted RBP6.42□□□□□ -1.38
SMARCAD1-203ENST00000394961 PRPF39Q86UA1 669 aaKnown RBP6.42□□□□□ -1.38
SMARCAD1-203ENST00000394961 LSMEM2Q8N112 164 aa6.42□□□□□ -1.38
SMARCAD1-203ENST00000394961 OR4C6Q8NH72 309 aa6.42□□□□□ -1.38
SMARCAD1-203ENST00000394961 DPH1Q9BZG8 443 aa6.42□□□□□ -1.38
SMARCAD1-203ENST00000394961 F5H5T6 163 aa6.41□□□□□ -1.38
SMARCAD1-203ENST00000394961 GSRP00390 522 aa6.41□□□□□ -1.38
SMARCAD1-203ENST00000394961 HOXC4P09017 264 aaPredicted RBP6.41□□□□□ -1.38
SMARCAD1-203ENST00000394961 ATXN1LP0C7T5 689 aaKnown RBP6.41□□□□□ -1.38
SMARCAD1-203ENST00000394961 CD44P16070 742 aaKnown RBP6.41□□□□□ -1.38
SMARCAD1-203ENST00000394961 CCR1P32246 355 aa6.41□□□□□ -1.38
SMARCAD1-203ENST00000394961 KRT83P78385 493 aa6.41□□□□□ -1.38
SMARCAD1-203ENST00000394961 PIP5KL1Q5T9C9 394 aa6.41□□□□□ -1.38
SMARCAD1-203ENST00000394961 SPATS2Q86XZ4 545 aaKnown RBP6.41□□□□□ -1.38
SMARCAD1-203ENST00000394961 ARHGEF19Q8IW93 802 aa6.41□□□□□ -1.38
SMARCAD1-203ENST00000394961 TPCN2Q8NHX9 752 aa6.41□□□□□ -1.38
SMARCAD1-203ENST00000394961 ZNF606Q8WXB4 792 aa6.41□□□□□ -1.38
SMARCAD1-203ENST00000394961 CCDC114Q96M63 670 aa6.41□□□□□ -1.38
SMARCAD1-203ENST00000394961 CAMK1GQ96NX5 476 aa6.41□□□□□ -1.38
SMARCAD1-203ENST00000394961 NAA15Q9BXJ9 866 aaKnown RBP6.41□□□□□ -1.38
SMARCAD1-203ENST00000394961 EBF2Q9HAK2 575 aa6.41□□□□□ -1.38
SMARCAD1-203ENST00000394961 SIX2Q9NPC8 291 aa6.41□□□□□ -1.38
SMARCAD1-203ENST00000394961 SALL4Q9UJQ4 1053 aa6.41□□□□□ -1.38
SMARCAD1-203ENST00000394961 ZNF106Q9H2Y7 1883 aaKnown RBP6.41□□□□□ -1.38
SMARCAD1-203ENST00000394961 WASH4PA8MWX3 477 aa6.41□□□□□ -1.38
SMARCAD1-203ENST00000394961 TRUB2O95900 331 aaKnown RBP6.41□□□□□ -1.38
SMARCAD1-203ENST00000394961 BMP6P22004 513 aa6.41□□□□□ -1.38
SMARCAD1-203ENST00000394961 AIF1P55008 147 aa6.41□□□□□ -1.38
SMARCAD1-203ENST00000394961 CDK17Q00537 523 aa6.41□□□□□ -1.38
SMARCAD1-203ENST00000394961 KCNH2Q12809 1159 aa6.41□□□□□ -1.38
SMARCAD1-203ENST00000394961 KCNT1Q5JUK3 1230 aa6.41□□□□□ -1.38
SMARCAD1-203ENST00000394961 TMEM270Q6UE05 265 aa6.41□□□□□ -1.38
SMARCAD1-203ENST00000394961 WDTC1Q8N5D0 677 aa6.41□□□□□ -1.38
SMARCAD1-203ENST00000394961 RHBDD1Q8TEB9 315 aa6.41□□□□□ -1.38
SMARCAD1-203ENST00000394961 BAP1Q92560 729 aa6.41□□□□□ -1.38
SMARCAD1-203ENST00000394961 VOPP1Q96AW1 172 aa6.41□□□□□ -1.38
SMARCAD1-203ENST00000394961 HIC2Q96JB3 615 aa6.41□□□□□ -1.38
SMARCAD1-203ENST00000394961 DUSP23Q9BVJ7 150 aa6.41□□□□□ -1.38
SMARCAD1-203ENST00000394961 CIPCQ9C0C6 399 aa6.41□□□□□ -1.38
SMARCAD1-203ENST00000394961 NEUROG2Q9H2A3 272 aa6.41□□□□□ -1.38
SMARCAD1-203ENST00000394961 FBXL12Q9NXK8 326 aa6.41□□□□□ -1.38
SMARCAD1-203ENST00000394961 APEX2Q9UBZ4 518 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms