RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 LGI2Q8N0V4 545 aa21.84■■□□□ 1.09
TRAF4-203ENST00000394925 PPM1KQ8N3J5 372 aa21.84■■□□□ 1.09
TRAF4-203ENST00000394925 TSC1Q92574 1164 aa21.84■■□□□ 1.09
TRAF4-203ENST00000394925 PTPRN2Q92932 1015 aa21.84■■□□□ 1.09
TRAF4-203ENST00000394925 FAM149B1Q96BN6 582 aa21.84■■□□□ 1.09
TRAF4-203ENST00000394925 CCDC34Q96HJ3 373 aa21.84■■□□□ 1.09
TRAF4-203ENST00000394925 RMND1Q9NWS8 449 aa21.84■■□□□ 1.09
TRAF4-203ENST00000394925 TRIM49BA6NDI0 452 aa21.83■■□□□ 1.09
TRAF4-203ENST00000394925 EIF2S3P41091 472 aaKnown RBP21.83■■□□□ 1.09
TRAF4-203ENST00000394925 PPP2CBP62714 309 aa21.83■■□□□ 1.09
TRAF4-203ENST00000394925 PPP2CAP67775 309 aa21.83■■□□□ 1.09
TRAF4-203ENST00000394925 NNTQ13423 1086 aa21.83■■□□□ 1.09
TRAF4-203ENST00000394925 ZNF658Q5TYW1 1059 aaPredicted RBP21.83■■□□□ 1.09
TRAF4-203ENST00000394925 RAP1GAP2Q684P5 730 aa21.83■■□□□ 1.09
TRAF4-203ENST00000394925 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP21.83■■□□□ 1.09
TRAF4-203ENST00000394925 TAC4Q86UU9 113 aa21.83■■□□□ 1.09
TRAF4-203ENST00000394925 SCAND2PQ9GZW5 306 aaPredicted RBP21.83■■□□□ 1.09
TRAF4-203ENST00000394925 FLNBO75369 2602 aaKnown RBP21.83■■□□□ 1.08
TRAF4-203ENST00000394925 DOCK9Q9BZ29 2069 aa21.83■■□□□ 1.08
TRAF4-203ENST00000394925 ZIC2O95409 532 aaPredicted RBP21.82■■□□□ 1.08
TRAF4-203ENST00000394925 VAV1P15498 845 aa21.82■■□□□ 1.08
TRAF4-203ENST00000394925 MZF1P28698 734 aaPredicted RBP21.82■■□□□ 1.08
TRAF4-203ENST00000394925 RXRGP48443 463 aa21.82■■□□□ 1.08
TRAF4-203ENST00000394925 NUCB2P80303 420 aa21.82■■□□□ 1.08
TRAF4-203ENST00000394925 FBXL19Q6PCT2 694 aa21.82■■□□□ 1.08
TRAF4-203ENST00000394925 CHSY1Q86X52 802 aa21.82■■□□□ 1.08
TRAF4-203ENST00000394925 GDPD2Q9HCC8 539 aa21.82■■□□□ 1.08
TRAF4-203ENST00000394925 ST7Q9NRC1 585 aa21.82■■□□□ 1.08
TRAF4-203ENST00000394925 TJP2Q9UDY2 1190 aa21.82■■□□□ 1.08
TRAF4-203ENST00000394925 TPX2Q9ULW0 747 aaKnown RBP21.82■■□□□ 1.08
TRAF4-203ENST00000394925 APOEP02649 317 aa21.81■■□□□ 1.08
TRAF4-203ENST00000394925 TACR2P21452 398 aa21.81■■□□□ 1.08
TRAF4-203ENST00000394925 DRD3P35462 400 aa21.81■■□□□ 1.08
TRAF4-203ENST00000394925 NNMTP40261 264 aa21.81■■□□□ 1.08
TRAF4-203ENST00000394925 ELAVL3Q14576 367 aaKnown RBP21.81■■□□□ 1.08
TRAF4-203ENST00000394925 COBLL1Q53SF7 1204 aa21.81■■□□□ 1.08
TRAF4-203ENST00000394925 ZC3H12AQ5D1E8 599 aaKnown RBP21.81■■□□□ 1.08
TRAF4-203ENST00000394925 SYPL2Q5VXT5 272 aa21.81■■□□□ 1.08
TRAF4-203ENST00000394925 NAPEPLDQ6IQ20 393 aa21.81■■□□□ 1.08
TRAF4-203ENST00000394925 RRAGAQ7L523 313 aa21.81■■□□□ 1.08
TRAF4-203ENST00000394925 SPATS2Q86XZ4 545 aaKnown RBP21.81■■□□□ 1.08
TRAF4-203ENST00000394925 OXR1Q8N573 874 aa21.81■■□□□ 1.08
TRAF4-203ENST00000394925 MFSD2AQ8NA29 543 aa21.81■■□□□ 1.08
TRAF4-203ENST00000394925 SLC39A7Q92504 469 aa21.81■■□□□ 1.08
TRAF4-203ENST00000394925 NRSN2Q9GZP1 204 aa21.81■■□□□ 1.08
TRAF4-203ENST00000394925 PRORYQ9H606 182 aa21.81■■□□□ 1.08
TRAF4-203ENST00000394925 ERVMER34-1Q9H9K5 563 aa21.81■■□□□ 1.08
TRAF4-203ENST00000394925 RAI2Q9Y5P3 530 aa21.81■■□□□ 1.08
TRAF4-203ENST00000394925 CAPN9O14815 690 aa21.8■■□□□ 1.08
TRAF4-203ENST00000394925 RRP8O43159 456 aaKnown RBP21.8■■□□□ 1.08
TRAF4-203ENST00000394925 SART1O43290 800 aaKnown RBP21.8■■□□□ 1.08
TRAF4-203ENST00000394925 LATO43561 262 aa21.8■■□□□ 1.08
TRAF4-203ENST00000394925 MAT2AP31153 395 aaKnown RBP21.8■■□□□ 1.08
TRAF4-203ENST00000394925 METAP1P53582 386 aa21.8■■□□□ 1.08
TRAF4-203ENST00000394925 LRRC63Q05C16 580 aa21.8■■□□□ 1.08
TRAF4-203ENST00000394925 C19orf57Q0VDD7 668 aa21.8■■□□□ 1.08
TRAF4-203ENST00000394925 RTP5Q14D33 572 aa21.8■■□□□ 1.08
TRAF4-203ENST00000394925 SFMBT2Q5VUG0 894 aa21.8■■□□□ 1.08
TRAF4-203ENST00000394925 PRPF39Q86UA1 669 aaKnown RBP21.8■■□□□ 1.08
TRAF4-203ENST00000394925 METTL14Q9HCE5 456 aaKnown RBP21.8■■□□□ 1.08
TRAF4-203ENST00000394925 ARHGAP20Q9P2F6 1191 aa21.8■■□□□ 1.08
TRAF4-203ENST00000394925 RTN2O75298 545 aa21.79■■□□□ 1.08
TRAF4-203ENST00000394925 PDGFRAP16234 1089 aa21.79■■□□□ 1.08
TRAF4-203ENST00000394925 CKMT2P17540 419 aa21.79■■□□□ 1.08
TRAF4-203ENST00000394925 GPD2P43304 727 aa21.79■■□□□ 1.08
TRAF4-203ENST00000394925 ILKQ13418 452 aa21.79■■□□□ 1.08
TRAF4-203ENST00000394925 KANSL1Q7Z3B3 1105 aa21.79■■□□□ 1.08
TRAF4-203ENST00000394925 CIR1Q86X95 450 aaPredicted RBP21.79■■□□□ 1.08
TRAF4-203ENST00000394925 ERCC4Q92889 916 aaPredicted RBP21.79■■□□□ 1.08
TRAF4-203ENST00000394925 BTN2A3PQ96KV6 586 aa21.79■■□□□ 1.08
TRAF4-203ENST00000394925 GSDMAQ96QA5 445 aa21.79■■□□□ 1.08
TRAF4-203ENST00000394925 SPAG5Q96R06 1193 aa21.79■■□□□ 1.08
TRAF4-203ENST00000394925 CYTH4Q9UIA0 394 aa21.79■■□□□ 1.08
TRAF4-203ENST00000394925 F5H5T6 163 aa21.78■■□□□ 1.08
TRAF4-203ENST00000394925 PMM2O15305 246 aa21.78■■□□□ 1.08
TRAF4-203ENST00000394925 RPL34P49207 117 aaKnown RBP21.78■■□□□ 1.08
TRAF4-203ENST00000394925 SLC12A1Q13621 1099 aa21.78■■□□□ 1.08
TRAF4-203ENST00000394925 CCDC40Q4G0X9 1142 aa21.78■■□□□ 1.08
TRAF4-203ENST00000394925 ARHGEF19Q8IW93 802 aa21.78■■□□□ 1.08
TRAF4-203ENST00000394925 LMO3Q8TAP4 145 aa21.78■■□□□ 1.08
TRAF4-203ENST00000394925 BAP1Q92560 729 aa21.78■■□□□ 1.08
TRAF4-203ENST00000394925 ATP6V1DQ9Y5K8 247 aa21.78■■□□□ 1.08
TRAF4-203ENST00000394925 ATXN7O15265 892 aaPredicted RBP21.77■■□□□ 1.08
TRAF4-203ENST00000394925 SDC3O75056 442 aa21.77■■□□□ 1.08
TRAF4-203ENST00000394925 TRUB2O95900 331 aaKnown RBP21.77■■□□□ 1.08
TRAF4-203ENST00000394925 GLDCP23378 1020 aa21.77■■□□□ 1.08
TRAF4-203ENST00000394925 ACADSBP45954 432 aa21.77■■□□□ 1.08
TRAF4-203ENST00000394925 SULT2A1Q06520 285 aa21.77■■□□□ 1.08
TRAF4-203ENST00000394925 CETN1Q12798 172 aa21.77■■□□□ 1.08
TRAF4-203ENST00000394925 DENND1BQ6P3S1 775 aa21.77■■□□□ 1.08
TRAF4-203ENST00000394925 BEND5Q7L4P6 421 aa21.77■■□□□ 1.08
TRAF4-203ENST00000394925 IQCHQ86VS3 1027 aa21.77■■□□□ 1.08
TRAF4-203ENST00000394925 CCAR2Q8N163 923 aaKnown RBP21.77■■□□□ 1.08
TRAF4-203ENST00000394925 ATP6V0D2Q8N8Y2 350 aa21.77■■□□□ 1.08
TRAF4-203ENST00000394925 FRS2Q8WU20 508 aa21.77■■□□□ 1.08
TRAF4-203ENST00000394925 FCRL3Q96P31 734 aaPredicted RBP21.77■■□□□ 1.08
TRAF4-203ENST00000394925 KDM4CQ9H3R0 1056 aa21.77■■□□□ 1.08
TRAF4-203ENST00000394925 SARDHQ9UL12 918 aa21.77■■□□□ 1.08
TRAF4-203ENST00000394925 CFAP46Q8IYW2 2715 aa21.77■■□□□ 1.07
TRAF4-203ENST00000394925 MGAQ8IWI9 3026 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms