RNA–Protein interactions for RNA: ENST00000394828.6

PPP3CB-203, Transcript of protein phosphatase 3 catalytic subunit beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP3CB, Length 3,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CB-203ENST00000394828 RAG1P15918 1043 aa12.14□□□□□ -0.47
PPP3CB-203ENST00000394828 LMO2P25791 158 aa12.14□□□□□ -0.47
PPP3CB-203ENST00000394828 MSX2P35548 267 aaPredicted RBP12.14□□□□□ -0.47
PPP3CB-203ENST00000394828 GABRB2P47870 512 aa12.14□□□□□ -0.47
PPP3CB-203ENST00000394828 LILRA4P59901 499 aa12.14□□□□□ -0.47
PPP3CB-203ENST00000394828 PDIA2Q13087 525 aaKnown RBP12.14□□□□□ -0.47
PPP3CB-203ENST00000394828 C6orf52Q5T4I8 152 aa12.14□□□□□ -0.47
PPP3CB-203ENST00000394828 DNAJC24Q6P3W2 148 aa12.14□□□□□ -0.47
PPP3CB-203ENST00000394828 UTS2BQ765I0 119 aa12.14□□□□□ -0.47
PPP3CB-203ENST00000394828 PRPF39Q86UA1 669 aaKnown RBP12.14□□□□□ -0.47
PPP3CB-203ENST00000394828 TTC39CQ8N584 583 aa12.14□□□□□ -0.47
PPP3CB-203ENST00000394828 ZNF560Q96MR9 790 aa12.14□□□□□ -0.47
PPP3CB-203ENST00000394828 SAGE1Q9NXZ1 904 aa12.14□□□□□ -0.47
PPP3CB-203ENST00000394828 ZMPSTE24O75844 475 aa12.14□□□□□ -0.47
PPP3CB-203ENST00000394828 CKBP12277 381 aa12.14□□□□□ -0.47
PPP3CB-203ENST00000394828 TMED10P49755 219 aaKnown RBP12.14□□□□□ -0.47
PPP3CB-203ENST00000394828 TAF6P49848 677 aa12.14□□□□□ -0.47
PPP3CB-203ENST00000394828 MBTPS1Q14703 1052 aa12.14□□□□□ -0.47
PPP3CB-203ENST00000394828 GOLGA7BQ2TAP0 167 aa12.14□□□□□ -0.47
PPP3CB-203ENST00000394828 NET1Q7Z628 596 aaPredicted RBP12.14□□□□□ -0.47
PPP3CB-203ENST00000394828 TTC30AQ86WT1 665 aa12.14□□□□□ -0.47
PPP3CB-203ENST00000394828 GLT1D1Q96MS3 346 aa12.14□□□□□ -0.47
PPP3CB-203ENST00000394828 CCDC28BQ9BUN5 200 aa12.14□□□□□ -0.47
PPP3CB-203ENST00000394828 TRAIPQ9BWF2 469 aa12.14□□□□□ -0.47
PPP3CB-203ENST00000394828 FAM49BQ9NUQ9 324 aa12.14□□□□□ -0.47
PPP3CB-203ENST00000394828 VPS51Q9UID3 782 aa12.14□□□□□ -0.47
PPP3CB-203ENST00000394828 MAD1L1Q9Y6D9 718 aa12.14□□□□□ -0.47
PPP3CB-203ENST00000394828 CDH2P19022 906 aaPredicted RBP12.13□□□□□ -0.47
PPP3CB-203ENST00000394828 ITIH2P19823 946 aa12.13□□□□□ -0.47
PPP3CB-203ENST00000394828 MAN1A1P33908 653 aa12.13□□□□□ -0.47
PPP3CB-203ENST00000394828 PNPLA4P41247 253 aa12.13□□□□□ -0.47
PPP3CB-203ENST00000394828 EIF2B2P49770 351 aaKnown RBP12.13□□□□□ -0.47
PPP3CB-203ENST00000394828 ITGA9Q13797 1035 aa12.13□□□□□ -0.47
PPP3CB-203ENST00000394828 CCNIQ14094 377 aa12.13□□□□□ -0.47
PPP3CB-203ENST00000394828 LRRC43Q8N309 656 aa12.13□□□□□ -0.47
PPP3CB-203ENST00000394828 OR6B3Q8NGW1 331 aa12.13□□□□□ -0.47
PPP3CB-203ENST00000394828 JOSD2Q8TAC2 188 aa12.13□□□□□ -0.47
PPP3CB-203ENST00000394828 CCDC77Q9BR77 488 aa12.13□□□□□ -0.47
PPP3CB-203ENST00000394828 TIMMDC1Q9NPL8 285 aa12.13□□□□□ -0.47
PPP3CB-203ENST00000394828 KLHL11Q9NVR0 708 aa12.13□□□□□ -0.47
PPP3CB-203ENST00000394828 KIAA1257Q9ULG3 409 aa12.13□□□□□ -0.47
PPP3CB-203ENST00000394828 NOD1Q9Y239 953 aa12.13□□□□□ -0.47
PPP3CB-203ENST00000394828 A0A088AWK7 358 aa12.13□□□□□ -0.47
PPP3CB-203ENST00000394828 FUOMA2VDF0 154 aa12.13□□□□□ -0.47
PPP3CB-203ENST00000394828 F8VP50 259 aa12.13□□□□□ -0.47
PPP3CB-203ENST00000394828 PRPF4O43172 522 aaKnown RBP eCLIP12.13□□□□□ -0.47
PPP3CB-203ENST00000394828 SLC5A3P53794 718 aa12.13□□□□□ -0.47
PPP3CB-203ENST00000394828 STAT4Q14765 748 aa12.13□□□□□ -0.47
PPP3CB-203ENST00000394828 CYP1B1Q16678 543 aa12.13□□□□□ -0.47
PPP3CB-203ENST00000394828 TRMT5Q32P41 509 aaKnown RBP12.13□□□□□ -0.47
PPP3CB-203ENST00000394828 SV2CQ496J9 727 aa12.13□□□□□ -0.47
PPP3CB-203ENST00000394828 ANKS1BQ7Z6G8 1248 aa12.13□□□□□ -0.47
PPP3CB-203ENST00000394828 C3orf58Q8NDZ4 430 aa12.13□□□□□ -0.47
PPP3CB-203ENST00000394828 FAM111AQ96PZ2 611 aa12.13□□□□□ -0.47
PPP3CB-203ENST00000394828 ANLNQ9NQW6 1124 aa12.13□□□□□ -0.47
PPP3CB-203ENST00000394828 IP6K2Q9UHH9 426 aa12.13□□□□□ -0.47
PPP3CB-203ENST00000394828 STRIP2Q9ULQ0 834 aa12.13□□□□□ -0.47
PPP3CB-203ENST00000394828 HBS1LQ9Y450 684 aaKnown RBP12.13□□□□□ -0.47
PPP3CB-203ENST00000394828 CEPT1Q9Y6K0 416 aa12.13□□□□□ -0.47
PPP3CB-203ENST00000394828 GABBR2O75899 941 aa12.13□□□□□ -0.47
PPP3CB-203ENST00000394828 RFC1P35251 1148 aaPredicted RBP12.13□□□□□ -0.47
PPP3CB-203ENST00000394828 SCNN1GP51170 649 aa12.13□□□□□ -0.47
PPP3CB-203ENST00000394828 PSMC1P62191 440 aaKnown RBP12.13□□□□□ -0.47
PPP3CB-203ENST00000394828 C6orf163Q5TEZ5 329 aa12.13□□□□□ -0.47
PPP3CB-203ENST00000394828 METTL21CQ5VZV1 264 aa12.13□□□□□ -0.47
PPP3CB-203ENST00000394828 CES4AQ5XG92 561 aa12.13□□□□□ -0.47
PPP3CB-203ENST00000394828 UNC93AQ86WB7 457 aa12.13□□□□□ -0.47
PPP3CB-203ENST00000394828 OSTM1Q86WC4 334 aa12.13□□□□□ -0.47
PPP3CB-203ENST00000394828 GSDMBQ8TAX9 411 aa12.13□□□□□ -0.47
PPP3CB-203ENST00000394828 RSPH1Q8WYR4 309 aa12.13□□□□□ -0.47
PPP3CB-203ENST00000394828 PIWIL1Q96J94 861 aaKnown RBP12.13□□□□□ -0.47
PPP3CB-203ENST00000394828 PAAF1Q9BRP4 392 aa12.13□□□□□ -0.47
PPP3CB-203ENST00000394828 TRPC7Q9HCX4 862 aa12.13□□□□□ -0.47
PPP3CB-203ENST00000394828 SACM1LQ9NTJ5 587 aa12.13□□□□□ -0.47
PPP3CB-203ENST00000394828 USTQ9Y2C2 406 aa12.13□□□□□ -0.47
PPP3CB-203ENST00000394828 GIT1Q9Y2X7 761 aa12.13□□□□□ -0.47
PPP3CB-203ENST00000394828 COQ6Q9Y2Z9 468 aa12.13□□□□□ -0.47
PPP3CB-203ENST00000394828 FAM32AQ9Y421 112 aaKnown RBP12.13□□□□□ -0.47
PPP3CB-203ENST00000394828 CROCCQ5TZA2 2017 aa12.12□□□□□ -0.47
PPP3CB-203ENST00000394828 K7EPI3 171 aa12.12□□□□□ -0.47
PPP3CB-203ENST00000394828 PIK3R2O00459 728 aa12.12□□□□□ -0.47
PPP3CB-203ENST00000394828 ZNF623O75123 536 aa12.12□□□□□ -0.47
PPP3CB-203ENST00000394828 SSTR1P30872 391 aa12.12□□□□□ -0.47
PPP3CB-203ENST00000394828 CLCNKBP51801 687 aa12.12□□□□□ -0.47
PPP3CB-203ENST00000394828 CCDC142Q17RM4 750 aa12.12□□□□□ -0.47
PPP3CB-203ENST00000394828 ARFGAP1Q8N6T3 406 aa12.12□□□□□ -0.47
PPP3CB-203ENST00000394828 APPL2Q8NEU8 664 aa12.12□□□□□ -0.47
PPP3CB-203ENST00000394828 ACTRT2Q8TDY3 377 aa12.12□□□□□ -0.47
PPP3CB-203ENST00000394828 MCRS1Q96EZ8 462 aa12.12□□□□□ -0.47
PPP3CB-203ENST00000394828 AGAP3Q96P47 875 aa12.12□□□□□ -0.47
PPP3CB-203ENST00000394828 HNRNPABQ99729 332 aaKnown RBP12.12□□□□□ -0.47
PPP3CB-203ENST00000394828 ADAM2Q99965 735 aa12.12□□□□□ -0.47
PPP3CB-203ENST00000394828 EBF4Q9BQW3 602 aa12.12□□□□□ -0.47
PPP3CB-203ENST00000394828 NEURL2Q9BR09 285 aa12.12□□□□□ -0.47
PPP3CB-203ENST00000394828 DMTF1Q9Y222 760 aa12.12□□□□□ -0.47
PPP3CB-203ENST00000394828 TIMM22Q9Y584 194 aa12.12□□□□□ -0.47
PPP3CB-203ENST00000394828 A0A0U1RQF3 1178 aa12.12□□□□□ -0.47
PPP3CB-203ENST00000394828 SH3PXD2BA1X283 911 aa12.12□□□□□ -0.47
PPP3CB-203ENST00000394828 F8W8V4 182 aa12.12□□□□□ -0.47
PPP3CB-203ENST00000394828 PSTPIP1O43586 416 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms