RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 FGF3P11487 239 aaPredicted RBP19.27■□□□□ 0.68
HOXC6-202ENST00000394331 UBA1P22314 1058 aaKnown RBP19.27■□□□□ 0.68
HOXC6-202ENST00000394331 JAK1P23458 1154 aa19.27■□□□□ 0.68
HOXC6-202ENST00000394331 GRK2P25098 689 aa19.27■□□□□ 0.68
HOXC6-202ENST00000394331 TKTP29401 623 aaKnown RBP19.27■□□□□ 0.68
HOXC6-202ENST00000394331 TCF7P36402 384 aaPredicted RBP19.27■□□□□ 0.68
HOXC6-202ENST00000394331 BMXP51813 675 aa19.27■□□□□ 0.68
HOXC6-202ENST00000394331 HNRNPFP52597 415 aaKnown RBP19.27■□□□□ 0.68
HOXC6-202ENST00000394331 IKBKEQ14164 716 aa19.27■□□□□ 0.68
HOXC6-202ENST00000394331 PIGHQ14442 188 aaPredicted RBP19.27■□□□□ 0.68
HOXC6-202ENST00000394331 PPP2R5DQ14738 602 aa19.27■□□□□ 0.68
HOXC6-202ENST00000394331 NR1D2Q14995 579 aa19.27■□□□□ 0.68
HOXC6-202ENST00000394331 SEZ6Q53EL9 994 aa19.27■□□□□ 0.68
HOXC6-202ENST00000394331 FASTKD1Q53R41 847 aaKnown RBP19.27■□□□□ 0.68
HOXC6-202ENST00000394331 DCUN1D2Q6PH85 259 aa19.27■□□□□ 0.68
HOXC6-202ENST00000394331 NIF3L1Q9GZT8 377 aa19.27■□□□□ 0.68
HOXC6-202ENST00000394331 VTA1Q9NP79 307 aa19.27■□□□□ 0.68
HOXC6-202ENST00000394331 SEPT3Q9UH03 358 aa19.27■□□□□ 0.68
HOXC6-202ENST00000394331 AFG3L2Q9Y4W6 797 aa19.27■□□□□ 0.68
HOXC6-202ENST00000394331 NOX1Q9Y5S8 564 aa19.27■□□□□ 0.68
HOXC6-202ENST00000394331 SLC22A2O15244 555 aa19.27■□□□□ 0.67
HOXC6-202ENST00000394331 FARP2O94887 1054 aaPredicted RBP19.27■□□□□ 0.67
HOXC6-202ENST00000394331 CST3P01034 146 aaPredicted RBP19.27■□□□□ 0.67
HOXC6-202ENST00000394331 EPHA3P29320 983 aa19.27■□□□□ 0.67
HOXC6-202ENST00000394331 OXA1LQ15070 435 aa19.27■□□□□ 0.67
HOXC6-202ENST00000394331 NOL9Q5SY16 702 aaKnown RBP19.27■□□□□ 0.67
HOXC6-202ENST00000394331 FAXCQ5TGI0 409 aa19.27■□□□□ 0.67
HOXC6-202ENST00000394331 PDPRQ8NCN5 879 aa19.27■□□□□ 0.67
HOXC6-202ENST00000394331 PCYT2Q99447 389 aa19.27■□□□□ 0.67
HOXC6-202ENST00000394331 FERMT1Q9BQL6 677 aa19.27■□□□□ 0.67
HOXC6-202ENST00000394331 C10orf88Q9H8K7 445 aa19.27■□□□□ 0.67
HOXC6-202ENST00000394331 KLHL11Q9NVR0 708 aa19.27■□□□□ 0.67
HOXC6-202ENST00000394331 IPO11Q9UI26 975 aaKnown RBP19.27■□□□□ 0.67
HOXC6-202ENST00000394331 FZD1Q9UP38 647 aa19.27■□□□□ 0.67
HOXC6-202ENST00000394331 ERVK-11Q9UQG0 969 aa19.27■□□□□ 0.67
HOXC6-202ENST00000394331 KRBA1A5PL33 1030 aa19.26■□□□□ 0.67
HOXC6-202ENST00000394331 SERPINE1P05121 402 aa19.26■□□□□ 0.67
HOXC6-202ENST00000394331 THOP1P52888 689 aa19.26■□□□□ 0.67
HOXC6-202ENST00000394331 GDF10P55107 478 aa19.26■□□□□ 0.67
HOXC6-202ENST00000394331 DUOXA2Q1HG44 320 aa19.26■□□□□ 0.67
HOXC6-202ENST00000394331 ATP13A4Q4VNC1 1196 aa19.26■□□□□ 0.67
HOXC6-202ENST00000394331 WDR78Q5VTH9 848 aa19.26■□□□□ 0.67
HOXC6-202ENST00000394331 PHTF2Q8N3S3 785 aa19.26■□□□□ 0.67
HOXC6-202ENST00000394331 TMEM79Q9BSE2 394 aa19.26■□□□□ 0.67
HOXC6-202ENST00000394331 MROQ9BYG7 248 aa19.26■□□□□ 0.67
HOXC6-202ENST00000394331 RIC8BQ9NVN3 520 aa19.26■□□□□ 0.67
HOXC6-202ENST00000394331 DOCK5Q9H7D0 1870 aa19.26■□□□□ 0.67
HOXC6-202ENST00000394331 MCF2P10911 925 aa19.26■□□□□ 0.67
HOXC6-202ENST00000394331 FSTL1Q12841 308 aa19.26■□□□□ 0.67
HOXC6-202ENST00000394331 ANKRD26P1Q6NSI1 321 aa19.26■□□□□ 0.67
HOXC6-202ENST00000394331 SETD3Q86TU7 594 aaPredicted RBP19.26■□□□□ 0.67
HOXC6-202ENST00000394331 KYQ8NBH2 561 aa19.26■□□□□ 0.67
HOXC6-202ENST00000394331 BHLHE22Q8NFJ8 381 aaPredicted RBP19.26■□□□□ 0.67
HOXC6-202ENST00000394331 TAMM41Q96BW9 452 aa19.26■□□□□ 0.67
HOXC6-202ENST00000394331 CNDP1Q96KN2 507 aa19.26■□□□□ 0.67
HOXC6-202ENST00000394331 FAM167AQ96KS9 214 aa19.26■□□□□ 0.67
HOXC6-202ENST00000394331 SLC13A1Q9BZW2 595 aa19.26■□□□□ 0.67
HOXC6-202ENST00000394331 IVNS1ABPQ9Y6Y0 642 aa19.26■□□□□ 0.67
HOXC6-202ENST00000394331 LOC100653049A0A140TA62 436 aa19.25■□□□□ 0.67
HOXC6-202ENST00000394331 TCRBV5S1A1TA0A578 114 aa19.25■□□□□ 0.67
HOXC6-202ENST00000394331 FZD9O00144 591 aa19.25■□□□□ 0.67
HOXC6-202ENST00000394331 OGTO15294 1046 aa19.25■□□□□ 0.67
HOXC6-202ENST00000394331 DGKIO75912 1065 aa19.25■□□□□ 0.67
HOXC6-202ENST00000394331 KRT34O76011 436 aa19.25■□□□□ 0.67
HOXC6-202ENST00000394331 XRCC1P18887 633 aaPredicted RBP19.25■□□□□ 0.67
HOXC6-202ENST00000394331 SERPINB9P50453 376 aa19.25■□□□□ 0.67
HOXC6-202ENST00000394331 IER5Q5VY09 327 aa19.25■□□□□ 0.67
HOXC6-202ENST00000394331 ZCCHC23Q6ZST2 131 aa19.25■□□□□ 0.67
HOXC6-202ENST00000394331 PPM1NQ8N819 430 aa19.25■□□□□ 0.67
HOXC6-202ENST00000394331 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.25■□□□□ 0.67
HOXC6-202ENST00000394331 RSAD2Q8WXG1 361 aa19.25■□□□□ 0.67
HOXC6-202ENST00000394331 SEPT1Q8WYJ6 367 aa19.25■□□□□ 0.67
HOXC6-202ENST00000394331 MCEEQ96PE7 176 aa19.25■□□□□ 0.67
HOXC6-202ENST00000394331 CISHQ9NSE2 258 aa19.25■□□□□ 0.67
HOXC6-202ENST00000394331 CDC14AQ9UNH5 594 aa19.25■□□□□ 0.67
HOXC6-202ENST00000394331 MSCO60682 206 aa19.25■□□□□ 0.67
HOXC6-202ENST00000394331 TNFSF9P41273 254 aa19.25■□□□□ 0.67
HOXC6-202ENST00000394331 MYL6P60660 151 aa19.25■□□□□ 0.67
HOXC6-202ENST00000394331 KCNJ8Q15842 424 aa19.25■□□□□ 0.67
HOXC6-202ENST00000394331 CYP2A13Q16696 494 aa19.25■□□□□ 0.67
HOXC6-202ENST00000394331 NDUFAF2Q8N183 169 aa19.25■□□□□ 0.67
HOXC6-202ENST00000394331 SORT1Q99523 831 aa19.25■□□□□ 0.67
HOXC6-202ENST00000394331 C1orf50Q9BV19 199 aa19.25■□□□□ 0.67
HOXC6-202ENST00000394331 SHCBP1LQ9BZQ2 653 aa19.25■□□□□ 0.67
HOXC6-202ENST00000394331 MTMR12Q9C0I1 747 aa19.25■□□□□ 0.67
HOXC6-202ENST00000394331 PDZD7Q9H5P4 517 aa19.25■□□□□ 0.67
HOXC6-202ENST00000394331 CXorf21Q9HAI6 301 aa19.25■□□□□ 0.67
HOXC6-202ENST00000394331 DKK3Q9UBP4 350 aa19.25■□□□□ 0.67
HOXC6-202ENST00000394331 SPO11Q9Y5K1 396 aa19.25■□□□□ 0.67
HOXC6-202ENST00000394331 GIPC1O14908 333 aa19.24■□□□□ 0.67
HOXC6-202ENST00000394331 ALOX5P09917 674 aa19.24■□□□□ 0.67
HOXC6-202ENST00000394331 TGFB3P10600 412 aa19.24■□□□□ 0.67
HOXC6-202ENST00000394331 YBX3P16989 372 aaKnown RBP eCLIP19.24■□□□□ 0.67
HOXC6-202ENST00000394331 PCYT1AP49585 367 aa19.24■□□□□ 0.67
HOXC6-202ENST00000394331 ZBTB33Q86T24 672 aa19.24■□□□□ 0.67
HOXC6-202ENST00000394331 COLGALT2Q8IYK4 626 aa19.24■□□□□ 0.67
HOXC6-202ENST00000394331 PGAM4Q8N0Y7 254 aa19.24■□□□□ 0.67
HOXC6-202ENST00000394331 NIPA2Q8N8Q9 360 aa19.24■□□□□ 0.67
HOXC6-202ENST00000394331 GRIN3AQ8TCU5 1115 aa19.24■□□□□ 0.67
HOXC6-202ENST00000394331 PCDHGC3Q9UN70 934 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms