RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 TFAP2DQ7Z6R9 452 aa19.53■□□□□ 0.72
PDLIM7-204ENST00000393546 FAM72BQ86X60 149 aa19.53■□□□□ 0.72
PDLIM7-204ENST00000393546 TMTC1Q8IUR5 882 aa19.53■□□□□ 0.72
PDLIM7-204ENST00000393546 PYROXD2Q8N2H3 581 aa19.53■□□□□ 0.72
PDLIM7-204ENST00000393546 BTBD6Q96KE9 485 aa19.53■□□□□ 0.72
PDLIM7-204ENST00000393546 EPAS1Q99814 870 aa19.53■□□□□ 0.72
PDLIM7-204ENST00000393546 FEM1AQ9BSK4 669 aa19.53■□□□□ 0.72
PDLIM7-204ENST00000393546 MUC3BQ9H195 1237 aa19.53■□□□□ 0.72
PDLIM7-204ENST00000393546 SEMA4AQ9H3S1 761 aa19.53■□□□□ 0.72
PDLIM7-204ENST00000393546 SUN2Q9UH99 717 aa19.53■□□□□ 0.72
PDLIM7-204ENST00000393546 INTUQ9ULD6 942 aa19.53■□□□□ 0.72
PDLIM7-204ENST00000393546 USP18Q9UMW8 372 aa19.53■□□□□ 0.72
PDLIM7-204ENST00000393546 DOCK4Q8N1I0 1966 aa19.52■□□□□ 0.72
PDLIM7-204ENST00000393546 TCRBV21S2A2A0A5A6 115 aa19.52■□□□□ 0.72
PDLIM7-204ENST00000393546 GOLGA6L6A8MZA4 724 aa19.52■□□□□ 0.72
PDLIM7-204ENST00000393546 EPHX1P07099 455 aa19.52■□□□□ 0.72
PDLIM7-204ENST00000393546 SRPRAP08240 638 aaKnown RBP19.52■□□□□ 0.72
PDLIM7-204ENST00000393546 MAGEA1P43355 309 aa19.52■□□□□ 0.72
PDLIM7-204ENST00000393546 ECT2LQ008S8 904 aa19.52■□□□□ 0.72
PDLIM7-204ENST00000393546 PTPRNQ16849 979 aa19.52■□□□□ 0.72
PDLIM7-204ENST00000393546 RASSF3Q86WH2 238 aa19.52■□□□□ 0.72
PDLIM7-204ENST00000393546 PSTKQ8IV42 348 aaKnown RBP19.52■□□□□ 0.72
PDLIM7-204ENST00000393546 PGBD3Q8N328 593 aa19.52■□□□□ 0.72
PDLIM7-204ENST00000393546 NIPA2Q8N8Q9 360 aa19.52■□□□□ 0.72
PDLIM7-204ENST00000393546 SPC24Q8NBT2 197 aa19.52■□□□□ 0.72
PDLIM7-204ENST00000393546 DHX35Q9H5Z1 703 aaKnown RBP19.52■□□□□ 0.72
PDLIM7-204ENST00000393546 BCCIPQ9P287 314 aaKnown RBP eCLIP19.52■□□□□ 0.72
PDLIM7-204ENST00000393546 LCMT1Q9UIC8 334 aa19.52■□□□□ 0.72
PDLIM7-204ENST00000393546 VPS28Q9UK41 221 aa19.52■□□□□ 0.72
PDLIM7-204ENST00000393546 AP4E1Q9UPM8 1137 aa19.52■□□□□ 0.72
PDLIM7-204ENST00000393546 ERVW-1Q9UQF0 538 aa19.52■□□□□ 0.72
PDLIM7-204ENST00000393546 RAD54BQ9Y620 910 aa19.52■□□□□ 0.72
PDLIM7-204ENST00000393546 ILVBLA1L0T0 632 aa19.51■□□□□ 0.71
PDLIM7-204ENST00000393546 EIF3CLB5ME19 914 aaKnown RBP19.51■□□□□ 0.71
PDLIM7-204ENST00000393546 CREB3O43889 395 aa19.51■□□□□ 0.71
PDLIM7-204ENST00000393546 LILRB5O75023 590 aa19.51■□□□□ 0.71
PDLIM7-204ENST00000393546 NNMTP40261 264 aa19.51■□□□□ 0.71
PDLIM7-204ENST00000393546 KRT83P78385 493 aa19.51■□□□□ 0.71
PDLIM7-204ENST00000393546 SPA17Q15506 151 aa19.51■□□□□ 0.71
PDLIM7-204ENST00000393546 BOLA3Q53S33 107 aa19.51■□□□□ 0.71
PDLIM7-204ENST00000393546 ZNF783Q6ZMS7 281 aa19.51■□□□□ 0.71
PDLIM7-204ENST00000393546 KDM1BQ8NB78 822 aa19.51■□□□□ 0.71
PDLIM7-204ENST00000393546 OR52K2Q8NGK3 314 aa19.51■□□□□ 0.71
PDLIM7-204ENST00000393546 HMGB4Q8WW32 186 aa19.51■□□□□ 0.71
PDLIM7-204ENST00000393546 FAM122AQ96E09 287 aa19.51■□□□□ 0.71
PDLIM7-204ENST00000393546 ALG14Q96F25 216 aa19.51■□□□□ 0.71
PDLIM7-204ENST00000393546 PEBP4Q96S96 227 aa19.51■□□□□ 0.71
PDLIM7-204ENST00000393546 EIF3CQ99613 913 aaKnown RBP19.51■□□□□ 0.71
PDLIM7-204ENST00000393546 TMEM245Q9H330 911 aa19.51■□□□□ 0.71
PDLIM7-204ENST00000393546 OR51B4Q9Y5P0 310 aa19.51■□□□□ 0.71
PDLIM7-204ENST00000393546 FANCMQ8IYD8 2048 aa19.51■□□□□ 0.71
PDLIM7-204ENST00000393546 FECHP22830 423 aa19.5■□□□□ 0.71
PDLIM7-204ENST00000393546 PRKCHP24723 683 aa19.5■□□□□ 0.71
PDLIM7-204ENST00000393546 EPHB2P29323 1055 aa19.5■□□□□ 0.71
PDLIM7-204ENST00000393546 HTR7P34969 479 aa19.5■□□□□ 0.71
PDLIM7-204ENST00000393546 CTSOP43234 321 aaPredicted RBP19.5■□□□□ 0.71
PDLIM7-204ENST00000393546 MAPKAPK2P49137 400 aa19.5■□□□□ 0.71
PDLIM7-204ENST00000393546 KIAA1211LQ6NV74 962 aa19.5■□□□□ 0.71
PDLIM7-204ENST00000393546 RHOT2Q8IXI1 618 aa19.5■□□□□ 0.71
PDLIM7-204ENST00000393546 MDGA1Q8NFP4 955 aa19.5■□□□□ 0.71
PDLIM7-204ENST00000393546 SLC35G2Q8TBE7 412 aa19.5■□□□□ 0.71
PDLIM7-204ENST00000393546 ERLEC1Q96DZ1 483 aa19.5■□□□□ 0.71
PDLIM7-204ENST00000393546 SNRNP25Q9BV90 132 aaKnown RBP19.5■□□□□ 0.71
PDLIM7-204ENST00000393546 CATSPERBQ9H7T0 1116 aa19.5■□□□□ 0.71
PDLIM7-204ENST00000393546 LUC7LQ9NQ29 371 aaKnown RBP19.5■□□□□ 0.71
PDLIM7-204ENST00000393546 TMEM248Q9NWD8 314 aa19.5■□□□□ 0.71
PDLIM7-204ENST00000393546 GPATCH2LQ9NWQ4 482 aa19.5■□□□□ 0.71
PDLIM7-204ENST00000393546 ZNF212Q9UDV6 495 aa19.5■□□□□ 0.71
PDLIM7-204ENST00000393546 EPN1Q9Y6I3 576 aaPredicted RBP19.5■□□□□ 0.71
PDLIM7-204ENST00000393546 PROB1E7EW31 1015 aa19.49■□□□□ 0.71
PDLIM7-204ENST00000393546 HRO43593 1189 aa19.49■□□□□ 0.71
PDLIM7-204ENST00000393546 LCA5LO95447 670 aa19.49■□□□□ 0.71
PDLIM7-204ENST00000393546 HLA-EP13747 358 aa19.49■□□□□ 0.71
PDLIM7-204ENST00000393546 GABRG2P18507 467 aa19.49■□□□□ 0.71
PDLIM7-204ENST00000393546 SSR1P43307 286 aaKnown RBP19.49■□□□□ 0.71
PDLIM7-204ENST00000393546 NUMBP49757 651 aa19.49■□□□□ 0.71
PDLIM7-204ENST00000393546 SEMA3BQ13214 749 aa19.49■□□□□ 0.71
PDLIM7-204ENST00000393546 HADHQ16836 314 aaKnown RBP19.49■□□□□ 0.71
PDLIM7-204ENST00000393546 USP39Q53GS9 565 aaKnown RBP19.49■□□□□ 0.71
PDLIM7-204ENST00000393546 NLRP14Q86W24 1093 aa19.49■□□□□ 0.71
PDLIM7-204ENST00000393546 RPL10LQ96L21 214 aaKnown RBP19.49■□□□□ 0.71
PDLIM7-204ENST00000393546 MRGPRX3Q96LB0 322 aa19.49■□□□□ 0.71
PDLIM7-204ENST00000393546 PHOX2BQ99453 314 aa19.49■□□□□ 0.71
PDLIM7-204ENST00000393546 SPON2Q9BUD6 331 aa19.49■□□□□ 0.71
PDLIM7-204ENST00000393546 C2orf49Q9BVC5 232 aaPredicted RBP19.49■□□□□ 0.71
PDLIM7-204ENST00000393546 TPSD1Q9BZJ3 242 aa19.49■□□□□ 0.71
PDLIM7-204ENST00000393546 CD248Q9HCU0 757 aa19.49■□□□□ 0.71
PDLIM7-204ENST00000393546 DONSONQ9NYP3 566 aa19.49■□□□□ 0.71
PDLIM7-204ENST00000393546 DNAI1Q9UI46 699 aa19.49■□□□□ 0.71
PDLIM7-204ENST00000393546 SLCO3A1Q9UIG8 710 aa19.49■□□□□ 0.71
PDLIM7-204ENST00000393546 SLC25A13Q9UJS0 675 aa19.49■□□□□ 0.71
PDLIM7-204ENST00000393546 A0A0D9SEW6 157 aa19.48■□□□□ 0.71
PDLIM7-204ENST00000393546 DAPK3O43293 454 aa19.48■□□□□ 0.71
PDLIM7-204ENST00000393546 PROSCO94903 275 aa19.48■□□□□ 0.71
PDLIM7-204ENST00000393546 IPO7O95373 1038 aaKnown RBP19.48■□□□□ 0.71
PDLIM7-204ENST00000393546 ETFBP38117 255 aa19.48■□□□□ 0.71
PDLIM7-204ENST00000393546 ZNF135P52742 658 aaPredicted RBP19.48■□□□□ 0.71
PDLIM7-204ENST00000393546 TPI1P60174 286 aa19.48■□□□□ 0.71
PDLIM7-204ENST00000393546 GNA12Q03113 381 aa19.48■□□□□ 0.71
PDLIM7-204ENST00000393546 BYSLQ13895 437 aaKnown RBP19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms