RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 FHOD1Q9Y613 1164 aa17.11■□□□□ 0.33
PTPRK-208ENST00000392449 EDDM13A0A1B0GTR0 161 aa17.1■□□□□ 0.33
PTPRK-208ENST00000392449 RNASEH1O60930 286 aaKnown RBP17.1■□□□□ 0.33
PTPRK-208ENST00000392449 SRPRAP08240 638 aaKnown RBP17.1■□□□□ 0.33
PTPRK-208ENST00000392449 CD27P26842 260 aa17.1■□□□□ 0.33
PTPRK-208ENST00000392449 SLC8A1P32418 973 aa17.1■□□□□ 0.33
PTPRK-208ENST00000392449 KRT9P35527 623 aa17.1■□□□□ 0.33
PTPRK-208ENST00000392449 KCNMA1Q12791 1236 aa17.1■□□□□ 0.33
PTPRK-208ENST00000392449 AUHQ13825 339 aaKnown RBP17.1■□□□□ 0.33
PTPRK-208ENST00000392449 RAPGEF1Q13905 1077 aa17.1■□□□□ 0.33
PTPRK-208ENST00000392449 KCNJ12Q14500 433 aa17.1■□□□□ 0.33
PTPRK-208ENST00000392449 ARID5BQ14865 1188 aa17.1■□□□□ 0.33
PTPRK-208ENST00000392449 VWA3BQ502W6 1294 aa17.1■□□□□ 0.33
PTPRK-208ENST00000392449 C2CD6Q53TS8 623 aa17.1■□□□□ 0.33
PTPRK-208ENST00000392449 EFHC1Q5JVL4 640 aa17.1■□□□□ 0.33
PTPRK-208ENST00000392449 USP30Q70CQ3 517 aa17.1■□□□□ 0.33
PTPRK-208ENST00000392449 SLCO6A1Q86UG4 719 aa17.1■□□□□ 0.33
PTPRK-208ENST00000392449 KDF1Q8NAX2 398 aaPredicted RBP17.1■□□□□ 0.33
PTPRK-208ENST00000392449 SLC6A18Q96N87 628 aa17.1■□□□□ 0.33
PTPRK-208ENST00000392449 RPRD1AQ96P16 312 aaPredicted RBP17.1■□□□□ 0.33
PTPRK-208ENST00000392449 TUBGCP2Q9BSJ2 902 aa17.1■□□□□ 0.33
PTPRK-208ENST00000392449 SYNCQ9H7C4 482 aa17.1■□□□□ 0.33
PTPRK-208ENST00000392449 ASNSD1Q9NWL6 643 aa17.1■□□□□ 0.33
PTPRK-208ENST00000392449 NCKAP1Q9Y2A7 1128 aa17.1■□□□□ 0.33
PTPRK-208ENST00000392449 MSRB2Q9Y3D2 182 aa17.1■□□□□ 0.33
PTPRK-208ENST00000392449 HS3ST4Q9Y661 456 aa17.1■□□□□ 0.33
PTPRK-208ENST00000392449 CABIN1Q9Y6J0 2220 aa17.09■□□□□ 0.33
PTPRK-208ENST00000392449 A0A1B0GVM2 712 aa17.09■□□□□ 0.33
PTPRK-208ENST00000392449 TCAF2A6NFQ2 919 aa17.09■□□□□ 0.33
PTPRK-208ENST00000392449 I6L893 689 aaPredicted RBP17.09■□□□□ 0.33
PTPRK-208ENST00000392449 M0QYT0 321 aa17.09■□□□□ 0.33
PTPRK-208ENST00000392449 WNT9AO14904 365 aa17.09■□□□□ 0.33
PTPRK-208ENST00000392449 DAB1O75553 588 aa17.09■□□□□ 0.33
PTPRK-208ENST00000392449 GLI1P08151 1106 aa17.09■□□□□ 0.33
PTPRK-208ENST00000392449 GRIA4P48058 902 aa17.09■□□□□ 0.33
PTPRK-208ENST00000392449 RNASE9P60153 205 aaKnown RBP17.09■□□□□ 0.33
PTPRK-208ENST00000392449 SLC6A3Q01959 620 aa17.09■□□□□ 0.33
PTPRK-208ENST00000392449 ZNF423Q2M1K9 1284 aa17.09■□□□□ 0.33
PTPRK-208ENST00000392449 PRAMEF14Q5SWL7 426 aa17.09■□□□□ 0.33
PTPRK-208ENST00000392449 TAF3Q5VWG9 929 aa17.09■□□□□ 0.33
PTPRK-208ENST00000392449 IL27RAQ6UWB1 636 aa17.09■□□□□ 0.33
PTPRK-208ENST00000392449 FAM71AQ8IYT1 594 aa17.09■□□□□ 0.33
PTPRK-208ENST00000392449 KDM1BQ8NB78 822 aa17.09■□□□□ 0.33
PTPRK-208ENST00000392449 ZCCHC14Q8WYQ9 949 aaKnown RBP17.09■□□□□ 0.33
PTPRK-208ENST00000392449 OMDQ99983 421 aa17.09■□□□□ 0.33
PTPRK-208ENST00000392449 TMPRSS4Q9NRS4 437 aa17.09■□□□□ 0.33
PTPRK-208ENST00000392449 SAMSN1Q9NSI8 373 aaKnown RBP17.09■□□□□ 0.33
PTPRK-208ENST00000392449 PIGVQ9NUD9 493 aa17.09■□□□□ 0.33
PTPRK-208ENST00000392449 SLC12A6Q9UHW9 1150 aa17.09■□□□□ 0.33
PTPRK-208ENST00000392449 TARSL2A2RTX5 802 aaKnown RBP17.08■□□□□ 0.32
PTPRK-208ENST00000392449 GOLGA8CPA6NN73 597 aa17.08■□□□□ 0.32
PTPRK-208ENST00000392449 H0Y8X5 98 aa17.08■□□□□ 0.32
PTPRK-208ENST00000392449 PES1O00541 588 aaKnown RBP17.08■□□□□ 0.32
PTPRK-208ENST00000392449 PAGE1O75459 146 aa17.08■□□□□ 0.32
PTPRK-208ENST00000392449 IL1BP01584 269 aa17.08■□□□□ 0.32
PTPRK-208ENST00000392449 ZNF883P0CG24 379 aa17.08■□□□□ 0.32
PTPRK-208ENST00000392449 SLC2A3P11169 496 aa17.08■□□□□ 0.32
PTPRK-208ENST00000392449 HNRNPDQ14103 355 aaKnown RBP17.08■□□□□ 0.32
PTPRK-208ENST00000392449 DRAP1Q14919 205 aaPredicted RBP17.08■□□□□ 0.32
PTPRK-208ENST00000392449 TEAD4Q15561 434 aa17.08■□□□□ 0.32
PTPRK-208ENST00000392449 POM121L1PQ3SYA9 428 aa17.08■□□□□ 0.32
PTPRK-208ENST00000392449 RABGAP1LQ5R372 815 aa17.08■□□□□ 0.32
PTPRK-208ENST00000392449 SLC26A9Q7LBE3 791 aa17.08■□□□□ 0.32
PTPRK-208ENST00000392449 FRS2Q8WU20 508 aa17.08■□□□□ 0.32
PTPRK-208ENST00000392449 ALG14Q96F25 216 aa17.08■□□□□ 0.32
PTPRK-208ENST00000392449 NOX5Q96PH1 765 aa17.08■□□□□ 0.32
PTPRK-208ENST00000392449 SIK2Q9H0K1 926 aa17.08■□□□□ 0.32
PTPRK-208ENST00000392449 SCML1Q9UN30 329 aa17.08■□□□□ 0.32
PTPRK-208ENST00000392449 PLXNB3Q9ULL4 1909 aa17.08■□□□□ 0.32
PTPRK-208ENST00000392449 PTPRBP23467 1997 aa17.08■□□□□ 0.32
PTPRK-208ENST00000392449 CNTN5O94779 1100 aa17.07■□□□□ 0.32
PTPRK-208ENST00000392449 TRIM16O95361 564 aa17.07■□□□□ 0.32
PTPRK-208ENST00000392449 ADCY5O95622 1261 aa17.07■□□□□ 0.32
PTPRK-208ENST00000392449 WNT1P04628 370 aa17.07■□□□□ 0.32
PTPRK-208ENST00000392449 ATXN1LP0C7T5 689 aaKnown RBP17.07■□□□□ 0.32
PTPRK-208ENST00000392449 ADPRHP54922 357 aa17.07■□□□□ 0.32
PTPRK-208ENST00000392449 ADAT2Q7Z6V5 191 aaKnown RBP17.07■□□□□ 0.32
PTPRK-208ENST00000392449 MARCH9Q86YJ5 346 aa17.07■□□□□ 0.32
PTPRK-208ENST00000392449 BAHD1Q8TBE0 780 aaPredicted RBP17.07■□□□□ 0.32
PTPRK-208ENST00000392449 RHBDD1Q8TEB9 315 aa17.07■□□□□ 0.32
PTPRK-208ENST00000392449 NUP62CLQ9H1M0 184 aa17.07■□□□□ 0.32
PTPRK-208ENST00000392449 OSGEPQ9NPF4 335 aa17.07■□□□□ 0.32
PTPRK-208ENST00000392449 TOR4AQ9NXH8 423 aa17.07■□□□□ 0.32
PTPRK-208ENST00000392449 SARDHQ9UL12 918 aa17.07■□□□□ 0.32
PTPRK-208ENST00000392449 DOCK9Q9BZ29 2069 aa17.07■□□□□ 0.32
PTPRK-208ENST00000392449 A0A1W2PPC4 97 aa17.06■□□□□ 0.32
PTPRK-208ENST00000392449 CYP11B1P15538 503 aa17.06■□□□□ 0.32
PTPRK-208ENST00000392449 NOS2P35228 1153 aa17.06■□□□□ 0.32
PTPRK-208ENST00000392449 DRD3P35462 400 aa17.06■□□□□ 0.32
PTPRK-208ENST00000392449 CTSKP43235 329 aa17.06■□□□□ 0.32
PTPRK-208ENST00000392449 SULT1E1P49888 294 aa17.06■□□□□ 0.32
PTPRK-208ENST00000392449 PLK1P53350 603 aa17.06■□□□□ 0.32
PTPRK-208ENST00000392449 PPP2CBP62714 309 aa17.06■□□□□ 0.32
PTPRK-208ENST00000392449 PPP2CAP67775 309 aa17.06■□□□□ 0.32
PTPRK-208ENST00000392449 ACCSLQ4AC99 568 aa17.06■□□□□ 0.32
PTPRK-208ENST00000392449 ALFQ53S48 1182 aa17.06■□□□□ 0.32
PTPRK-208ENST00000392449 KLHDC7AQ5VTJ3 777 aa17.06■□□□□ 0.32
PTPRK-208ENST00000392449 TTC39BQ5VTQ0 682 aaPredicted RBP17.06■□□□□ 0.32
PTPRK-208ENST00000392449 DBX2Q6ZNG2 339 aa17.06■□□□□ 0.32
PTPRK-208ENST00000392449 FAM114A1Q8IWE2 563 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms