RNA–Protein interactions for RNA: ENST00000391942.6

ERCC2-202, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC2, Length 1,488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-202ENST00000391942 NOL6Q9H6R4 1146 aaKnown RBP17.49■□□□□ 0.39
ERCC2-202ENST00000391942 PRKAG3Q9UGI9 489 aa17.49■□□□□ 0.39
ERCC2-202ENST00000391942 CDC23Q9UJX2 597 aa17.49■□□□□ 0.39
ERCC2-202ENST00000391942 TCF20Q9UGU0 1960 aaKnown RBP17.48■□□□□ 0.39
ERCC2-202ENST00000391942 TRIM24O15164 1050 aa17.48■□□□□ 0.39
ERCC2-202ENST00000391942 HOXC11O43248 304 aaPredicted RBP17.48■□□□□ 0.39
ERCC2-202ENST00000391942 TGM2P21980 687 aa17.48■□□□□ 0.39
ERCC2-202ENST00000391942 SERPINB6P35237 376 aa17.48■□□□□ 0.39
ERCC2-202ENST00000391942 SOX9P48436 509 aa17.48■□□□□ 0.39
ERCC2-202ENST00000391942 OTUD4Q01804 1114 aaKnown RBP17.48■□□□□ 0.39
ERCC2-202ENST00000391942 GAB4Q2WGN9 574 aa17.48■□□□□ 0.39
ERCC2-202ENST00000391942 C6orf118Q5T5N4 469 aa17.48■□□□□ 0.39
ERCC2-202ENST00000391942 RNF219Q5W0B1 726 aaPredicted RBP17.48■□□□□ 0.39
ERCC2-202ENST00000391942 ASTLQ6HA08 431 aaPredicted RBP17.48■□□□□ 0.39
ERCC2-202ENST00000391942 ZNF354CQ86Y25 554 aa17.48■□□□□ 0.39
ERCC2-202ENST00000391942 ARHGAP12Q8IWW6 846 aa17.48■□□□□ 0.39
ERCC2-202ENST00000391942 C1orf54Q8WWF1 131 aa17.48■□□□□ 0.39
ERCC2-202ENST00000391942 ATXN2LQ8WWM7 1075 aaKnown RBP17.48■□□□□ 0.39
ERCC2-202ENST00000391942 ATG4AQ8WYN0 398 aa17.48■□□□□ 0.39
ERCC2-202ENST00000391942 P3H4Q92791 437 aa17.48■□□□□ 0.39
ERCC2-202ENST00000391942 ASB2Q96Q27 587 aa17.48■□□□□ 0.39
ERCC2-202ENST00000391942 SLC39A8Q9C0K1 460 aa17.48■□□□□ 0.39
ERCC2-202ENST00000391942 DNAJC17Q9NVM6 304 aaKnown RBP17.48■□□□□ 0.39
ERCC2-202ENST00000391942 DTLQ9NZJ0 730 aa17.48■□□□□ 0.39
ERCC2-202ENST00000391942 TTC7AQ9ULT0 858 aaPredicted RBP17.48■□□□□ 0.39
ERCC2-202ENST00000391942 MYO10Q9HD67 2058 aa17.47■□□□□ 0.39
ERCC2-202ENST00000391942 A0A0D9SEW6 157 aa17.47■□□□□ 0.39
ERCC2-202ENST00000391942 APOC4-APOC2K7ER74 178 aa17.47■□□□□ 0.39
ERCC2-202ENST00000391942 RAMP2O60895 175 aa17.47■□□□□ 0.39
ERCC2-202ENST00000391942 APOC2P02655 101 aa17.47■□□□□ 0.39
ERCC2-202ENST00000391942 MZF1P28698 734 aaPredicted RBP17.47■□□□□ 0.39
ERCC2-202ENST00000391942 CD70P32970 193 aa17.47■□□□□ 0.39
ERCC2-202ENST00000391942 GJA4P35212 333 aa17.47■□□□□ 0.39
ERCC2-202ENST00000391942 ACVRL1P37023 503 aa17.47■□□□□ 0.39
ERCC2-202ENST00000391942 CSKP41240 450 aa17.47■□□□□ 0.39
ERCC2-202ENST00000391942 PAFAH1B1P43034 410 aa17.47■□□□□ 0.39
ERCC2-202ENST00000391942 SLC6A11P48066 632 aa17.47■□□□□ 0.39
ERCC2-202ENST00000391942 LMAN2Q12907 356 aa17.47■□□□□ 0.39
ERCC2-202ENST00000391942 SIX1Q15475 284 aaPredicted RBP17.47■□□□□ 0.39
ERCC2-202ENST00000391942 RNF43Q68DV7 783 aa17.47■□□□□ 0.39
ERCC2-202ENST00000391942 NAIF1Q69YI7 327 aaPredicted RBP17.47■□□□□ 0.39
ERCC2-202ENST00000391942 UMODL1-AS1Q8N2C9 162 aa17.47■□□□□ 0.39
ERCC2-202ENST00000391942 OR7D4Q8NG98 312 aa17.47■□□□□ 0.39
ERCC2-202ENST00000391942 FIBINQ8TAL6 211 aa17.47■□□□□ 0.39
ERCC2-202ENST00000391942 ACTL9Q8TC94 416 aa17.47■□□□□ 0.39
ERCC2-202ENST00000391942 HMCESQ96FZ2 354 aa17.47■□□□□ 0.39
ERCC2-202ENST00000391942 XPO6Q96QU8 1125 aaKnown RBP17.47■□□□□ 0.39
ERCC2-202ENST00000391942 NAP1L3Q99457 506 aaPredicted RBP17.47■□□□□ 0.39
ERCC2-202ENST00000391942 MUC3BQ9H195 1237 aa17.47■□□□□ 0.39
ERCC2-202ENST00000391942 PRDM16Q9HAZ2 1276 aa17.47■□□□□ 0.39
ERCC2-202ENST00000391942 ABCB8Q9NUT2 735 aa17.47■□□□□ 0.39
ERCC2-202ENST00000391942 TBC1D30Q9Y2I9 924 aa17.47■□□□□ 0.39
ERCC2-202ENST00000391942 MRFAP1Q9Y605 127 aa17.47■□□□□ 0.39
ERCC2-202ENST00000391942 NUP205Q92621 2012 aa17.47■□□□□ 0.39
ERCC2-202ENST00000391942 RASA4BC9J798 803 aa17.46■□□□□ 0.39
ERCC2-202ENST00000391942 KRIT1O00522 736 aa17.46■□□□□ 0.39
ERCC2-202ENST00000391942 RASA4O43374 803 aa17.46■□□□□ 0.39
ERCC2-202ENST00000391942 CACNG3O60359 315 aa17.46■□□□□ 0.39
ERCC2-202ENST00000391942 BMP1P13497 986 aa17.46■□□□□ 0.39
ERCC2-202ENST00000391942 GNA12Q03113 381 aa17.46■□□□□ 0.39
ERCC2-202ENST00000391942 KDSRQ06136 332 aa17.46■□□□□ 0.39
ERCC2-202ENST00000391942 TDGQ13569 410 aa17.46■□□□□ 0.39
ERCC2-202ENST00000391942 SNX1Q13596 522 aa17.46■□□□□ 0.39
ERCC2-202ENST00000391942 POLD3Q15054 466 aaPredicted RBP17.46■□□□□ 0.39
ERCC2-202ENST00000391942 AFMIDQ63HM1 303 aa17.46■□□□□ 0.39
ERCC2-202ENST00000391942 ARHGAP36Q6ZRI8 547 aa17.46■□□□□ 0.39
ERCC2-202ENST00000391942 SETD3Q86TU7 594 aaPredicted RBP17.46■□□□□ 0.39
ERCC2-202ENST00000391942 ZC3H18Q86VM9 953 aaKnown RBP17.46■□□□□ 0.39
ERCC2-202ENST00000391942 LZTR1Q8N653 840 aa17.46■□□□□ 0.39
ERCC2-202ENST00000391942 MAIP1Q8WWC4 291 aa17.46■□□□□ 0.39
ERCC2-202ENST00000391942 SPON2Q9BUD6 331 aa17.46■□□□□ 0.39
ERCC2-202ENST00000391942 RETREG1Q9H6L5 497 aa17.46■□□□□ 0.39
ERCC2-202ENST00000391942 LRRC19Q9H756 370 aa17.46■□□□□ 0.39
ERCC2-202ENST00000391942 DONSONQ9NYP3 566 aa17.46■□□□□ 0.39
ERCC2-202ENST00000391942 NYNRINQ9P2P1 1898 aaKnown RBP17.46■□□□□ 0.39
ERCC2-202ENST00000391942 MIA3Q5JRA6 1907 aa17.46■□□□□ 0.39
ERCC2-202ENST00000391942 ILVBLA1L0T0 632 aa17.45■□□□□ 0.38
ERCC2-202ENST00000391942 TULP3O75386 442 aa17.45■□□□□ 0.38
ERCC2-202ENST00000391942 HLA-FP30511 346 aa17.45■□□□□ 0.38
ERCC2-202ENST00000391942 PAPOLAP51003 745 aaKnown RBP17.45■□□□□ 0.38
ERCC2-202ENST00000391942 NDST2P52849 883 aa17.45■□□□□ 0.38
ERCC2-202ENST00000391942 APCDD1Q8J025 514 aa17.45■□□□□ 0.38
ERCC2-202ENST00000391942 ARHGEF2Q92974 986 aaKnown RBP17.45■□□□□ 0.38
ERCC2-202ENST00000391942 CHFRQ96EP1 664 aa17.45■□□□□ 0.38
ERCC2-202ENST00000391942 C10orf88Q9H8K7 445 aa17.45■□□□□ 0.38
ERCC2-202ENST00000391942 RRAGDQ9NQL2 400 aaPredicted RBP17.45■□□□□ 0.38
ERCC2-202ENST00000391942 HEBP1Q9NRV9 189 aa17.45■□□□□ 0.38
ERCC2-202ENST00000391942 KIAA1522Q9P206 1035 aaPredicted RBP17.45■□□□□ 0.38
ERCC2-202ENST00000391942 RNF14Q9UBS8 474 aa17.45■□□□□ 0.38
ERCC2-202ENST00000391942 COL4A2P08572 1712 aa17.45■□□□□ 0.38
ERCC2-202ENST00000391942 H7C0C1 242 aa17.44■□□□□ 0.38
ERCC2-202ENST00000391942 GLDCP23378 1020 aa17.44■□□□□ 0.38
ERCC2-202ENST00000391942 OPRD1P41143 372 aa17.44■□□□□ 0.38
ERCC2-202ENST00000391942 ATP5OP48047 213 aa17.44■□□□□ 0.38
ERCC2-202ENST00000391942 NR2C2P49116 596 aa17.44■□□□□ 0.38
ERCC2-202ENST00000391942 DGKGP49619 791 aa17.44■□□□□ 0.38
ERCC2-202ENST00000391942 EIF3EP60228 445 aaKnown RBP17.44■□□□□ 0.38
ERCC2-202ENST00000391942 MESP2Q0VG99 397 aa17.44■□□□□ 0.38
ERCC2-202ENST00000391942 GALNT2Q10471 571 aa17.44■□□□□ 0.38
ERCC2-202ENST00000391942 NOMO1Q15155 1222 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms