RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 NBPF7P0C2Y1 421 aaPredicted RBP3.71□□□□□ -1.82
TRAV40-201ENST00000390467 CPA1P15085 419 aa3.71□□□□□ -1.82
TRAV40-201ENST00000390467 MLH1P40692 756 aa3.71□□□□□ -1.82
TRAV40-201ENST00000390467 ADPRHP54922 357 aa3.71□□□□□ -1.82
TRAV40-201ENST00000390467 SELENOVP59797 346 aa3.71□□□□□ -1.82
TRAV40-201ENST00000390467 RBM6P78332 1123 aaKnown RBP3.71□□□□□ -1.82
TRAV40-201ENST00000390467 RHAGQ02094 409 aa3.71□□□□□ -1.82
TRAV40-201ENST00000390467 HLTFQ14527 1009 aaKnown RBP eCLIP3.71□□□□□ -1.82
TRAV40-201ENST00000390467 SLC4A8Q2Y0W8 1093 aa3.71□□□□□ -1.82
TRAV40-201ENST00000390467 ALG10Q5BKT4 473 aa3.71□□□□□ -1.82
TRAV40-201ENST00000390467 ALG10BQ5I7T1 473 aa3.71□□□□□ -1.82
TRAV40-201ENST00000390467 SLC16A12Q6ZSM3 486 aa3.71□□□□□ -1.82
TRAV40-201ENST00000390467 CCDC25Q86WR0 208 aa3.71□□□□□ -1.82
TRAV40-201ENST00000390467 NRSN1Q8IZ57 195 aa3.71□□□□□ -1.82
TRAV40-201ENST00000390467 SLC25A41Q8N5S1 370 aa3.71□□□□□ -1.82
TRAV40-201ENST00000390467 KDM1BQ8NB78 822 aa3.71□□□□□ -1.82
TRAV40-201ENST00000390467 FAM110DQ8TAY7 271 aaPredicted RBP3.71□□□□□ -1.82
TRAV40-201ENST00000390467 DEPTORQ8TB45 409 aa3.71□□□□□ -1.82
TRAV40-201ENST00000390467 MED30Q96HR3 178 aa3.71□□□□□ -1.82
TRAV40-201ENST00000390467 MEIS3Q99687 375 aa3.71□□□□□ -1.82
TRAV40-201ENST00000390467 WDR77Q9BQA1 342 aaPredicted RBP3.71□□□□□ -1.82
TRAV40-201ENST00000390467 NTPCRQ9BSD7 190 aaKnown RBP3.71□□□□□ -1.82
TRAV40-201ENST00000390467 DCLK3Q9C098 648 aa3.71□□□□□ -1.82
TRAV40-201ENST00000390467 NCKIPSDQ9NZQ3 722 aa3.71□□□□□ -1.82
TRAV40-201ENST00000390467 SELENONQ9NZV5 590 aa3.71□□□□□ -1.82
TRAV40-201ENST00000390467 MAGED2Q9UNF1 606 aaPredicted RBP3.71□□□□□ -1.82
TRAV40-201ENST00000390467 CNTN6Q9UQ52 1028 aa3.71□□□□□ -1.82
TRAV40-201ENST00000390467 DTX4Q9Y2E6 619 aa3.71□□□□□ -1.82
TRAV40-201ENST00000390467 PKP3Q9Y446 797 aa3.71□□□□□ -1.82
TRAV40-201ENST00000390467 PTGDR2Q9Y5Y4 395 aa3.71□□□□□ -1.82
TRAV40-201ENST00000390467 TBC1D3DA0A087WVF3 549 aa3.7□□□□□ -1.82
TRAV40-201ENST00000390467 TBC1D3IA0A087WXS9 549 aa3.7□□□□□ -1.82
TRAV40-201ENST00000390467 TBC1D3EA0A087X179 549 aa3.7□□□□□ -1.82
TRAV40-201ENST00000390467 TBC1D3KA0A087X1G2 549 aa3.7□□□□□ -1.82
TRAV40-201ENST00000390467 TRBV5-7A0A0A0MS05 114 aa3.7□□□□□ -1.82
TRAV40-201ENST00000390467 CLEC18AA5D8T8 446 aa3.7□□□□□ -1.82
TRAV40-201ENST00000390467 TBC1D3BA6NDS4 549 aa3.7□□□□□ -1.82
TRAV40-201ENST00000390467 TBC1D3FA6NER0 549 aaPredicted RBP3.7□□□□□ -1.82
TRAV40-201ENST00000390467 AGAP5A6NIR3 686 aa3.7□□□□□ -1.82
TRAV40-201ENST00000390467 TBC1D3LB9A6J9 549 aa3.7□□□□□ -1.82
TRAV40-201ENST00000390467 HEXIM1O94992 359 aaKnown RBP3.7□□□□□ -1.82
TRAV40-201ENST00000390467 TBC1D3HP0C7X1 549 aa3.7□□□□□ -1.82
TRAV40-201ENST00000390467 TGFB3P10600 412 aa3.7□□□□□ -1.82
TRAV40-201ENST00000390467 TNFSF8P32971 234 aa3.7□□□□□ -1.82
TRAV40-201ENST00000390467 RASSF2P50749 326 aa3.7□□□□□ -1.82
TRAV40-201ENST00000390467 ROR2Q01974 943 aaKnown RBP3.7□□□□□ -1.82
TRAV40-201ENST00000390467 EGR4Q05215 589 aa3.7□□□□□ -1.82
TRAV40-201ENST00000390467 Q0VFX4 171 aa3.7□□□□□ -1.82
TRAV40-201ENST00000390467 GPS2Q13227 327 aa3.7□□□□□ -1.82
TRAV40-201ENST00000390467 GPR18Q14330 331 aa3.7□□□□□ -1.82
TRAV40-201ENST00000390467 TRIM60Q495X7 471 aa3.7□□□□□ -1.82
TRAV40-201ENST00000390467 TBC1D3GQ6DHY5 549 aa3.7□□□□□ -1.82
TRAV40-201ENST00000390467 TBC1D3CQ6IPX1 549 aa3.7□□□□□ -1.82
TRAV40-201ENST00000390467 KRTAP5-11Q6L8G4 156 aa3.7□□□□□ -1.82
TRAV40-201ENST00000390467 XRRA1Q6P2D8 792 aa3.7□□□□□ -1.82
TRAV40-201ENST00000390467 SLC30A9Q6PML9 568 aa3.7□□□□□ -1.82
TRAV40-201ENST00000390467 SRLQ86TD4 932 aa3.7□□□□□ -1.82
TRAV40-201ENST00000390467 GATAD2AQ86YP4 633 aa3.7□□□□□ -1.82
TRAV40-201ENST00000390467 KLBQ86Z14 1044 aa3.7□□□□□ -1.82
TRAV40-201ENST00000390467 TBC1D3Q8IZP1 549 aaPredicted RBP3.7□□□□□ -1.82
TRAV40-201ENST00000390467 CLEC18CQ8NCF0 446 aa3.7□□□□□ -1.82
TRAV40-201ENST00000390467 CMASQ8NFW8 434 aaPredicted RBP3.7□□□□□ -1.82
TRAV40-201ENST00000390467 SPATA3Q8NHX4 192 aa3.7□□□□□ -1.82
TRAV40-201ENST00000390467 ELP5Q8TE02 316 aa3.7□□□□□ -1.82
TRAV40-201ENST00000390467 NUDCD2Q8WVJ2 157 aa3.7□□□□□ -1.82
TRAV40-201ENST00000390467 FAM84BQ96KN1 310 aaPredicted RBP3.7□□□□□ -1.82
TRAV40-201ENST00000390467 TMEM120AQ9BXJ8 343 aa3.7□□□□□ -1.82
TRAV40-201ENST00000390467 POLDIP3Q9BY77 421 aaKnown RBP3.7□□□□□ -1.82
TRAV40-201ENST00000390467 ARNT2Q9HBZ2 717 aa3.7□□□□□ -1.82
TRAV40-201ENST00000390467 CD93Q9NPY3 652 aa3.7□□□□□ -1.82
TRAV40-201ENST00000390467 ARL15Q9NXU5 204 aa3.7□□□□□ -1.82
TRAV40-201ENST00000390467 PLK2Q9NYY3 685 aa3.7□□□□□ -1.82
TRAV40-201ENST00000390467 NFU1Q9UMS0 254 aa3.7□□□□□ -1.82
TRAV40-201ENST00000390467 TCRBV7S3A2A0A539 114 aa3.69□□□□□ -1.82
TRAV40-201ENST00000390467 MBD3L5A6NJ08 208 aaPredicted RBP3.69□□□□□ -1.82
TRAV40-201ENST00000390467 SPRY3O43610 288 aa3.69□□□□□ -1.82
TRAV40-201ENST00000390467 CYP1A2P05177 515 aa3.69□□□□□ -1.82
TRAV40-201ENST00000390467 FGF3P11487 239 aaPredicted RBP3.69□□□□□ -1.82
TRAV40-201ENST00000390467 GYS1P13807 737 aa3.69□□□□□ -1.82
TRAV40-201ENST00000390467 CHRNB2P17787 502 aa3.69□□□□□ -1.82
TRAV40-201ENST00000390467 PPM1AP35813 382 aa3.69□□□□□ -1.82
TRAV40-201ENST00000390467 PMS2P54278 862 aa3.69□□□□□ -1.82
TRAV40-201ENST00000390467 TMPRSS3P57727 454 aa3.69□□□□□ -1.82
TRAV40-201ENST00000390467 ABATP80404 500 aa3.69□□□□□ -1.82
TRAV40-201ENST00000390467 KEAP1Q14145 624 aa3.69□□□□□ -1.82
TRAV40-201ENST00000390467 ERAP2Q6P179 960 aa3.69□□□□□ -1.82
TRAV40-201ENST00000390467 Q6ZSV7 163 aa3.69□□□□□ -1.82
TRAV40-201ENST00000390467 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.69□□□□□ -1.82
TRAV40-201ENST00000390467 SYTL1Q8IYJ3 562 aa3.69□□□□□ -1.82
TRAV40-201ENST00000390467 CADM3Q8N126 398 aa3.69□□□□□ -1.82
TRAV40-201ENST00000390467 GABPB2Q8TAK5 448 aaPredicted RBP3.69□□□□□ -1.82
TRAV40-201ENST00000390467 ADAMTS14Q8WXS8 1223 aa3.69□□□□□ -1.82
TRAV40-201ENST00000390467 PHF21BQ96EK2 531 aa3.69□□□□□ -1.82
TRAV40-201ENST00000390467 MYD88Q99836 296 aa3.69□□□□□ -1.82
TRAV40-201ENST00000390467 HDHD5Q9BXW7 423 aa3.69□□□□□ -1.82
TRAV40-201ENST00000390467 SEPSECSQ9HD40 501 aaKnown RBP3.69□□□□□ -1.82
TRAV40-201ENST00000390467 RNF146Q9NTX7 359 aa3.69□□□□□ -1.82
TRAV40-201ENST00000390467 ICKQ9UPZ9 632 aa3.69□□□□□ -1.82
TRAV40-201ENST00000390467 EME2A4GXA9 379 aaPredicted RBP3.68□□□□□ -1.82
TRAV40-201ENST00000390467 IFITM10A6NMD0 228 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms