RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 MBNL1Q9NR56 388 aaKnown RBP6.74□□□□□ -1.33
TRAV35-201ENST00000390462 MRPS18AQ9NVS2 196 aaKnown RBP6.74□□□□□ -1.33
TRAV35-201ENST00000390462 SH3BP4Q9P0V3 963 aa6.74□□□□□ -1.33
TRAV35-201ENST00000390462 DBR1Q9UK59 544 aaKnown RBP6.74□□□□□ -1.33
TRAV35-201ENST00000390462 PCDHB7Q9Y5E2 793 aa6.74□□□□□ -1.33
TRAV35-201ENST00000390462 SESN1Q9Y6P5 492 aa6.74□□□□□ -1.33
TRAV35-201ENST00000390462 ARHGAP5Q13017 1502 aa6.73□□□□□ -1.33
TRAV35-201ENST00000390462 TMEM265A0A087WTH1 108 aa6.73□□□□□ -1.33
TRAV35-201ENST00000390462 LOC105369274A0A096LPK9 316 aa6.73□□□□□ -1.33
TRAV35-201ENST00000390462 LOC102723532A0A0G2JNH3 316 aa6.73□□□□□ -1.33
TRAV35-201ENST00000390462 TEX13CA0A0J9YWL9 993 aa6.73□□□□□ -1.33
TRAV35-201ENST00000390462 OR2A25A4D2G3 310 aa6.73□□□□□ -1.33
TRAV35-201ENST00000390462 AGAP5A6NIR3 686 aa6.73□□□□□ -1.33
TRAV35-201ENST00000390462 TMEM110-MUSTN1A8MSY1 372 aa6.73□□□□□ -1.33
TRAV35-201ENST00000390462 NOTOA8MTQ0 251 aa6.73□□□□□ -1.33
TRAV35-201ENST00000390462 KCNJ18B7U540 433 aa6.73□□□□□ -1.33
TRAV35-201ENST00000390462 DCLK1O15075 740 aa6.73□□□□□ -1.33
TRAV35-201ENST00000390462 CD3EAPO15446 510 aaKnown RBP6.73□□□□□ -1.33
TRAV35-201ENST00000390462 DHX15O43143 795 aaKnown RBP6.73□□□□□ -1.33
TRAV35-201ENST00000390462 PRPF4O43172 522 aaKnown RBP eCLIP6.73□□□□□ -1.33
TRAV35-201ENST00000390462 ZBTB43O43298 467 aa6.73□□□□□ -1.33
TRAV35-201ENST00000390462 SMPD2O60906 423 aa6.73□□□□□ -1.33
TRAV35-201ENST00000390462 SNX4O95219 450 aa6.73□□□□□ -1.33
TRAV35-201ENST00000390462 CYBBP04839 570 aa6.73□□□□□ -1.33
TRAV35-201ENST00000390462 GABRB1P18505 474 aa6.73□□□□□ -1.33
TRAV35-201ENST00000390462 NTSR1P30989 418 aa6.73□□□□□ -1.33
TRAV35-201ENST00000390462 CASQ1P31415 396 aa6.73□□□□□ -1.33
TRAV35-201ENST00000390462 PRPHP41219 470 aa6.73□□□□□ -1.33
TRAV35-201ENST00000390462 TNNT2P45379 298 aaPredicted RBP6.73□□□□□ -1.33
TRAV35-201ENST00000390462 CCR10P46092 362 aa6.73□□□□□ -1.33
TRAV35-201ENST00000390462 NT5C2P49902 561 aa6.73□□□□□ -1.33
TRAV35-201ENST00000390462 NKX3-2P78367 333 aa6.73□□□□□ -1.33
TRAV35-201ENST00000390462 SLFN5Q08AF3 891 aa6.73□□□□□ -1.33
TRAV35-201ENST00000390462 KIAA2012Q0VF49 1180 aa6.73□□□□□ -1.33
TRAV35-201ENST00000390462 NFIAQ12857 509 aa6.73□□□□□ -1.33
TRAV35-201ENST00000390462 MRPL28Q13084 256 aaKnown RBP6.73□□□□□ -1.33
TRAV35-201ENST00000390462 TUBB2AQ13885 445 aa6.73□□□□□ -1.33
TRAV35-201ENST00000390462 KCNJ12Q14500 433 aa6.73□□□□□ -1.33
TRAV35-201ENST00000390462 ZNF529Q6P280 563 aa6.73□□□□□ -1.33
TRAV35-201ENST00000390462 WDR93Q6P2C0 686 aa6.73□□□□□ -1.33
TRAV35-201ENST00000390462 PAQR3Q6TCH7 311 aa6.73□□□□□ -1.33
TRAV35-201ENST00000390462 NFXL1Q6ZNB6 911 aa6.73□□□□□ -1.33
TRAV35-201ENST00000390462 RABEPKQ7Z6M1 372 aa6.73□□□□□ -1.33
TRAV35-201ENST00000390462 ALYREFQ86V81 257 aaKnown RBP6.73□□□□□ -1.33
TRAV35-201ENST00000390462 KBTBD6Q86V97 674 aa6.73□□□□□ -1.33
TRAV35-201ENST00000390462 AMIGO3Q86WK7 504 aa6.73□□□□□ -1.33
TRAV35-201ENST00000390462 RHPN2Q8IUC4 686 aa6.73□□□□□ -1.33
TRAV35-201ENST00000390462 TICAM1Q8IUC6 712 aa6.73□□□□□ -1.33
TRAV35-201ENST00000390462 ARHGAP12Q8IWW6 846 aa6.73□□□□□ -1.33
TRAV35-201ENST00000390462 OR4N4Q8N0Y3 316 aa6.73□□□□□ -1.33
TRAV35-201ENST00000390462 HDDC3Q8N4P3 179 aa6.73□□□□□ -1.33
TRAV35-201ENST00000390462 DNAJB14Q8TBM8 379 aa6.73□□□□□ -1.33
TRAV35-201ENST00000390462 GFM2Q969S9 779 aaKnown RBP6.73□□□□□ -1.33
TRAV35-201ENST00000390462 ARRDC3Q96B67 414 aa6.73□□□□□ -1.33
TRAV35-201ENST00000390462 TMCO6Q96DC7 493 aa6.73□□□□□ -1.33
TRAV35-201ENST00000390462 CFAP57Q96MR6 1250 aa6.73□□□□□ -1.33
TRAV35-201ENST00000390462 DGAT2Q96PD7 388 aa6.73□□□□□ -1.33
TRAV35-201ENST00000390462 HIST1H2AAQ96QV6 131 aa6.73□□□□□ -1.33
TRAV35-201ENST00000390462 TUBB2BQ9BVA1 445 aa6.73□□□□□ -1.33
TRAV35-201ENST00000390462 MRPL1Q9BYD6 325 aaKnown RBP6.73□□□□□ -1.33
TRAV35-201ENST00000390462 KRT23Q9C075 422 aa6.73□□□□□ -1.33
TRAV35-201ENST00000390462 KCNH6Q9H252 994 aa6.73□□□□□ -1.33
TRAV35-201ENST00000390462 ADAMTS10Q9H324 1103 aa6.73□□□□□ -1.33
TRAV35-201ENST00000390462 ZNF552Q9H707 407 aaPredicted RBP6.73□□□□□ -1.33
TRAV35-201ENST00000390462 POLR1BQ9H9Y6 1135 aa6.73□□□□□ -1.33
TRAV35-201ENST00000390462 CARS2Q9HA77 564 aaKnown RBP6.73□□□□□ -1.33
TRAV35-201ENST00000390462 FANCFQ9NPI8 374 aa6.73□□□□□ -1.33
TRAV35-201ENST00000390462 ANO10Q9NW15 660 aa6.73□□□□□ -1.33
TRAV35-201ENST00000390462 OSGIN1Q9UJX0 560 aa6.73□□□□□ -1.33
TRAV35-201ENST00000390462 MLH3Q9UHC1 1453 aa6.73□□□□□ -1.33
TRAV35-201ENST00000390462 A0A1W2PRV1 198 aa6.72□□□□□ -1.33
TRAV35-201ENST00000390462 MBD3L5A6NJ08 208 aaPredicted RBP6.72□□□□□ -1.33
TRAV35-201ENST00000390462 OR6C76A6NM76 312 aa6.72□□□□□ -1.33
TRAV35-201ENST00000390462 CDRT15L2A8MXV6 281 aa6.72□□□□□ -1.33
TRAV35-201ENST00000390462 E9PLN8 166 aa6.72□□□□□ -1.33
TRAV35-201ENST00000390462 LDLRAD4O15165 306 aa6.72□□□□□ -1.33
TRAV35-201ENST00000390462 AGFG2O95081 481 aa6.72□□□□□ -1.33
TRAV35-201ENST00000390462 MPOP05164 745 aa6.72□□□□□ -1.33
TRAV35-201ENST00000390462 FYNP06241 537 aa6.72□□□□□ -1.33
TRAV35-201ENST00000390462 HMOX1P09601 288 aa6.72□□□□□ -1.33
TRAV35-201ENST00000390462 SUPT20HL2P0C7V6 817 aa6.72□□□□□ -1.33
TRAV35-201ENST00000390462 PRR35P0CG20 571 aa6.72□□□□□ -1.33
TRAV35-201ENST00000390462 AVPR2P30518 371 aa6.72□□□□□ -1.33
TRAV35-201ENST00000390462 LRPAP1P30533 357 aa6.72□□□□□ -1.33
TRAV35-201ENST00000390462 CPOXP36551 454 aa6.72□□□□□ -1.33
TRAV35-201ENST00000390462 DGKEP52429 567 aa6.72□□□□□ -1.33
TRAV35-201ENST00000390462 EPHB3P54753 998 aa6.72□□□□□ -1.33
TRAV35-201ENST00000390462 MFAP4P55083 255 aa6.72□□□□□ -1.33
TRAV35-201ENST00000390462 FAM3BP58499 235 aaPredicted RBP6.72□□□□□ -1.33
TRAV35-201ENST00000390462 RBM6P78332 1123 aaKnown RBP6.72□□□□□ -1.33
TRAV35-201ENST00000390462 CHRNEQ04844 493 aa6.72□□□□□ -1.33
TRAV35-201ENST00000390462 GOLGA8FQ08AF8 430 aa6.72□□□□□ -1.33
TRAV35-201ENST00000390462 PTCHD3Q3KNS1 767 aa6.72□□□□□ -1.33
TRAV35-201ENST00000390462 SUPT20HL1Q3ZLR7 823 aa6.72□□□□□ -1.33
TRAV35-201ENST00000390462 CST9LP1Q5W188 147 aa6.72□□□□□ -1.33
TRAV35-201ENST00000390462 HMBOX1Q6NT76 420 aa6.72□□□□□ -1.33
TRAV35-201ENST00000390462 MSANTD1Q6ZTZ1 278 aa6.72□□□□□ -1.33
TRAV35-201ENST00000390462 PIK3AP1Q6ZUJ8 805 aa6.72□□□□□ -1.33
TRAV35-201ENST00000390462 ERN2Q76MJ5 926 aaKnown RBP6.72□□□□□ -1.33
TRAV35-201ENST00000390462 PARS2Q7L3T8 475 aaKnown RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms