RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 MT-ND3P03897 115 aa25.79■■□□□ 1.72
SHOX2-201ENST00000389589 ZDHHC11BP0C7U3 371 aa25.79■■□□□ 1.72
SHOX2-201ENST00000389589 PGAM1P18669 254 aa25.79■■□□□ 1.72
SHOX2-201ENST00000389589 CA4P22748 312 aa25.79■■□□□ 1.72
SHOX2-201ENST00000389589 CD68P34810 354 aaPredicted RBP25.79■■□□□ 1.72
SHOX2-201ENST00000389589 PRPSAP1Q14558 356 aa25.79■■□□□ 1.72
SHOX2-201ENST00000389589 TTC39BQ5VTQ0 682 aaPredicted RBP25.79■■□□□ 1.72
SHOX2-201ENST00000389589 AFMIDQ63HM1 303 aa25.79■■□□□ 1.72
SHOX2-201ENST00000389589 CASC4Q6P4E1 433 aa25.79■■□□□ 1.72
SHOX2-201ENST00000389589 C14orf80Q86SX3 495 aa25.79■■□□□ 1.72
SHOX2-201ENST00000389589 ZSCAN18Q8TBC5 510 aaPredicted RBP25.79■■□□□ 1.72
SHOX2-201ENST00000389589 DIS3LQ8TF46 1054 aaKnown RBP25.79■■□□□ 1.72
SHOX2-201ENST00000389589 ZNF333Q96JL9 665 aa25.79■■□□□ 1.72
SHOX2-201ENST00000389589 GORASP1Q9BQQ3 440 aa25.79■■□□□ 1.72
SHOX2-201ENST00000389589 UBE2OQ9C0C9 1292 aaKnown RBP25.79■■□□□ 1.72
SHOX2-201ENST00000389589 MLXIPLQ9NP71 852 aa25.79■■□□□ 1.72
SHOX2-201ENST00000389589 PPARGC1AQ9UBK2 798 aaKnown RBP25.79■■□□□ 1.72
SHOX2-201ENST00000389589 COL4A6Q14031 1691 aa25.79■■□□□ 1.72
SHOX2-201ENST00000389589 NYNRINQ9P2P1 1898 aaKnown RBP25.79■■□□□ 1.72
SHOX2-201ENST00000389589 ABHD14A-ACY1A0A1B0GW23 586 aa25.79■■□□□ 1.72
SHOX2-201ENST00000389589 ZWINTO95229 277 aa25.79■■□□□ 1.72
SHOX2-201ENST00000389589 MGAT1P26572 445 aa25.79■■□□□ 1.72
SHOX2-201ENST00000389589 KPNA1P52294 538 aaPredicted RBP25.79■■□□□ 1.72
SHOX2-201ENST00000389589 SESN2P58004 480 aaPredicted RBP25.79■■□□□ 1.72
SHOX2-201ENST00000389589 SPARCL1Q14515 664 aa25.79■■□□□ 1.72
SHOX2-201ENST00000389589 KCTD11Q693B1 232 aa25.79■■□□□ 1.72
SHOX2-201ENST00000389589 KIAA1841Q6NSI8 718 aa25.79■■□□□ 1.72
SHOX2-201ENST00000389589 TIGD7Q6NT04 549 aaPredicted RBP25.79■■□□□ 1.72
SHOX2-201ENST00000389589 GDAP1Q8TB36 358 aa25.79■■□□□ 1.72
SHOX2-201ENST00000389589 CDK5RAP1Q96SZ6 601 aaKnown RBP25.79■■□□□ 1.72
SHOX2-201ENST00000389589 SLC39A8Q9C0K1 460 aa25.79■■□□□ 1.72
SHOX2-201ENST00000389589 WBP1LQ9NX94 342 aa25.79■■□□□ 1.72
SHOX2-201ENST00000389589 MOCS1Q9NZB8 636 aa25.79■■□□□ 1.72
SHOX2-201ENST00000389589 KRT37O76014 449 aa25.78■■□□□ 1.72
SHOX2-201ENST00000389589 ALDH1A2O94788 518 aa25.78■■□□□ 1.72
SHOX2-201ENST00000389589 NFKB1P19838 968 aa25.78■■□□□ 1.72
SHOX2-201ENST00000389589 RING1Q06587 406 aa25.78■■□□□ 1.72
SHOX2-201ENST00000389589 ANKLE1Q8NAG6 615 aa25.78■■□□□ 1.72
SHOX2-201ENST00000389589 TOP1MTQ969P6 601 aa25.78■■□□□ 1.72
SHOX2-201ENST00000389589 AP3B1O00203 1094 aa25.78■■□□□ 1.72
SHOX2-201ENST00000389589 ASMTLO95671 621 aa25.78■■□□□ 1.72
SHOX2-201ENST00000389589 CCNB1P14635 433 aa25.78■■□□□ 1.72
SHOX2-201ENST00000389589 RHOQP17081 205 aa25.78■■□□□ 1.72
SHOX2-201ENST00000389589 ATF6P18850 670 aa25.78■■□□□ 1.72
SHOX2-201ENST00000389589 OR1D2P34982 312 aa25.78■■□□□ 1.72
SHOX2-201ENST00000389589 MS4A13Q5J8X5 152 aa25.78■■□□□ 1.72
SHOX2-201ENST00000389589 CACNA2D3Q8IZS8 1091 aa25.78■■□□□ 1.72
SHOX2-201ENST00000389589 ZNF276Q8N554 614 aa25.78■■□□□ 1.72
SHOX2-201ENST00000389589 GIPC2Q8TF65 315 aa25.78■■□□□ 1.72
SHOX2-201ENST00000389589 TTC17Q96AE7 1141 aa25.78■■□□□ 1.72
SHOX2-201ENST00000389589 VWCEQ96DN2 955 aa25.78■■□□□ 1.72
SHOX2-201ENST00000389589 SEC16BQ96JE7 1060 aa25.78■■□□□ 1.72
SHOX2-201ENST00000389589 VN1R3Q9BXE9 311 aa25.78■■□□□ 1.72
SHOX2-201ENST00000389589 HSFX1Q9UBD0 423 aa25.78■■□□□ 1.72
SHOX2-201ENST00000389589 MATN3O15232 486 aa25.77■■□□□ 1.72
SHOX2-201ENST00000389589 MAFKO60675 156 aa25.77■■□□□ 1.72
SHOX2-201ENST00000389589 TBX18O95935 607 aa25.77■■□□□ 1.72
SHOX2-201ENST00000389589 IGLV3-27P01718 113 aa25.77■■□□□ 1.72
SHOX2-201ENST00000389589 WDR4P57081 412 aaKnown RBP25.77■■□□□ 1.72
SHOX2-201ENST00000389589 ZNF683Q8IZ20 524 aa25.77■■□□□ 1.72
SHOX2-201ENST00000389589 CNPY4Q8N129 248 aa25.77■■□□□ 1.72
SHOX2-201ENST00000389589 ARNTL2Q8WYA1 636 aa25.77■■□□□ 1.72
SHOX2-201ENST00000389589 PPP1R2P1Q96PQ5 205 aa25.77■■□□□ 1.72
SHOX2-201ENST00000389589 ZYG11BQ9C0D3 744 aa25.77■■□□□ 1.72
SHOX2-201ENST00000389589 LRRC40Q9H9A6 602 aa25.77■■□□□ 1.72
SHOX2-201ENST00000389589 CASS4Q9NQ75 786 aa25.77■■□□□ 1.72
SHOX2-201ENST00000389589 PRDM5Q9NQX1 630 aaPredicted RBP25.77■■□□□ 1.72
SHOX2-201ENST00000389589 ATXN2Q99700 1313 aaKnown RBP25.77■■□□□ 1.72
SHOX2-201ENST00000389589 CXorf49A8MYA2 514 aaPredicted RBP25.76■■□□□ 1.71
SHOX2-201ENST00000389589 ADAM12O43184 909 aa25.76■■□□□ 1.71
SHOX2-201ENST00000389589 CACNG3O60359 315 aa25.76■■□□□ 1.71
SHOX2-201ENST00000389589 FAM155BO75949 473 aa25.76■■□□□ 1.71
SHOX2-201ENST00000389589 SNRPAP09012 282 aaKnown RBP25.76■■□□□ 1.71
SHOX2-201ENST00000389589 RPA3P35244 121 aaPredicted RBP25.76■■□□□ 1.71
SHOX2-201ENST00000389589 SPOUT1Q5T280 376 aaKnown RBP25.76■■□□□ 1.71
SHOX2-201ENST00000389589 MIB1Q86YT6 1006 aa25.76■■□□□ 1.71
SHOX2-201ENST00000389589 OVCA2Q8WZ82 227 aa25.76■■□□□ 1.71
SHOX2-201ENST00000389589 MTBPQ96DY7 904 aa25.76■■□□□ 1.71
SHOX2-201ENST00000389589 IL12RB2Q99665 862 aa25.76■■□□□ 1.71
SHOX2-201ENST00000389589 BFARQ9NZS9 450 aa25.76■■□□□ 1.71
SHOX2-201ENST00000389589 MPP6Q9NZW5 540 aa25.76■■□□□ 1.71
SHOX2-201ENST00000389589 SAMD15Q9P1V8 674 aa25.76■■□□□ 1.71
SHOX2-201ENST00000389589 AFF4Q9UHB7 1163 aaKnown RBP25.76■■□□□ 1.71
SHOX2-201ENST00000389589 VANGL2Q9ULK5 521 aa25.76■■□□□ 1.71
SHOX2-201ENST00000389589 SLC12A8A0AV02 714 aa25.76■■□□□ 1.71
SHOX2-201ENST00000389589 CARNS1A5YM72 827 aa25.76■■□□□ 1.71
SHOX2-201ENST00000389589 TCP11X1B4DZS4 312 aa25.76■■□□□ 1.71
SHOX2-201ENST00000389589 TM9SF1O15321 606 aa25.76■■□□□ 1.71
SHOX2-201ENST00000389589 SOD2P04179 222 aa25.76■■□□□ 1.71
SHOX2-201ENST00000389589 SERPINB9P50453 376 aa25.76■■□□□ 1.71
SHOX2-201ENST00000389589 NDST2P52849 883 aa25.76■■□□□ 1.71
SHOX2-201ENST00000389589 TRMT10BQ6PF06 316 aaKnown RBP25.76■■□□□ 1.71
SHOX2-201ENST00000389589 KLHDC8BQ8IXV7 354 aa25.76■■□□□ 1.71
SHOX2-201ENST00000389589 UMODL1-AS1Q8N2C9 162 aa25.76■■□□□ 1.71
SHOX2-201ENST00000389589 BANPQ8N9N5 519 aa25.76■■□□□ 1.71
SHOX2-201ENST00000389589 PDZD8Q8NEN9 1154 aa25.76■■□□□ 1.71
SHOX2-201ENST00000389589 OR52K1Q8NGK4 314 aa25.76■■□□□ 1.71
SHOX2-201ENST00000389589 ZNF689Q96CS4 500 aaPredicted RBP25.76■■□□□ 1.71
SHOX2-201ENST00000389589 ZNF558Q96NG5 402 aa25.76■■□□□ 1.71
SHOX2-201ENST00000389589 MLPHQ9BV36 600 aaPredicted RBP25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms