RNA–Protein interactions for RNA: ENST00000389413.7

PTPRN2-201, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 1 (best) BASIC

Gene PTPRN2, Length 4,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-201ENST00000389413 MRPS22P82650 360 aaKnown RBP16.43■□□□□ 0.22
PTPRN2-201ENST00000389413 WSCD1Q658N2 575 aa16.43■□□□□ 0.22
PTPRN2-201ENST00000389413 B3GALNT2Q8NCR0 500 aa16.43■□□□□ 0.22
PTPRN2-201ENST00000389413 PCDHB8Q9UN66 801 aa16.43■□□□□ 0.22
PTPRN2-201ENST00000389413 H0YGN5 161 aa16.43■□□□□ 0.22
PTPRN2-201ENST00000389413 DEAF1O75398 565 aaPredicted RBP16.43■□□□□ 0.22
PTPRN2-201ENST00000389413 HUNKP57058 714 aa16.43■□□□□ 0.22
PTPRN2-201ENST00000389413 TFAP2DQ7Z6R9 452 aa16.43■□□□□ 0.22
PTPRN2-201ENST00000389413 DHDDSQ86SQ9 333 aa16.43■□□□□ 0.22
PTPRN2-201ENST00000389413 TFAP2BQ92481 460 aa16.43■□□□□ 0.22
PTPRN2-201ENST00000389413 ZFRQ96KR1 1074 aaKnown RBP16.43■□□□□ 0.22
PTPRN2-201ENST00000389413 ELOVL4Q9GZR5 314 aa16.43■□□□□ 0.22
PTPRN2-201ENST00000389413 COPS7BQ9H9Q2 264 aaPredicted RBP16.43■□□□□ 0.22
PTPRN2-201ENST00000389413 RGS18Q9NS28 235 aa16.43■□□□□ 0.22
PTPRN2-201ENST00000389413 CRLS1Q9UJA2 301 aa16.43■□□□□ 0.22
PTPRN2-201ENST00000389413 RAD54BQ9Y620 910 aa16.43■□□□□ 0.22
PTPRN2-201ENST00000389413 NFS1Q9Y697 457 aa16.43■□□□□ 0.22
PTPRN2-201ENST00000389413 LRP6O75581 1613 aa16.43■□□□□ 0.22
PTPRN2-201ENST00000389413 A0A087X1B8 175 aa16.43■□□□□ 0.22
PTPRN2-201ENST00000389413 SNUPNO95149 360 aaKnown RBP16.43■□□□□ 0.22
PTPRN2-201ENST00000389413 NFKB1P19838 968 aa16.43■□□□□ 0.22
PTPRN2-201ENST00000389413 FASP25445 335 aa16.43■□□□□ 0.22
PTPRN2-201ENST00000389413 OXCT1P55809 520 aa16.43■□□□□ 0.22
PTPRN2-201ENST00000389413 SAMD4BQ5PRF9 694 aaKnown RBP16.43■□□□□ 0.22
PTPRN2-201ENST00000389413 THEMIS2Q5TEJ8 643 aa16.43■□□□□ 0.22
PTPRN2-201ENST00000389413 PRMT9Q6P2P2 845 aa16.43■□□□□ 0.22
PTPRN2-201ENST00000389413 SNX31Q8N9S9 440 aa16.43■□□□□ 0.22
PTPRN2-201ENST00000389413 SERPINB11Q96P15 392 aa16.43■□□□□ 0.22
PTPRN2-201ENST00000389413 ZNF142P52746 1687 aaPredicted RBP16.42■□□□□ 0.22
PTPRN2-201ENST00000389413 HNRNPRO43390 633 aaKnown RBP16.42■□□□□ 0.22
PTPRN2-201ENST00000389413 SERPINF2P08697 491 aa16.42■□□□□ 0.22
PTPRN2-201ENST00000389413 CRHR1P34998 444 aa16.42■□□□□ 0.22
PTPRN2-201ENST00000389413 GSTA3Q16772 222 aa16.42■□□□□ 0.22
PTPRN2-201ENST00000389413 TTLL9Q3SXZ7 439 aa16.42■□□□□ 0.22
PTPRN2-201ENST00000389413 CACHD1Q5VU97 1274 aa16.42■□□□□ 0.22
PTPRN2-201ENST00000389413 LRRC8BQ6P9F7 803 aa16.42■□□□□ 0.22
PTPRN2-201ENST00000389413 DIS3LQ8TF46 1054 aaKnown RBP16.42■□□□□ 0.22
PTPRN2-201ENST00000389413 KLRG1Q96E93 195 aa16.42■□□□□ 0.22
PTPRN2-201ENST00000389413 PPP1R10Q96QC0 940 aaKnown RBP16.42■□□□□ 0.22
PTPRN2-201ENST00000389413 GPR20Q99678 358 aa16.42■□□□□ 0.22
PTPRN2-201ENST00000389413 ACE2Q9BYF1 805 aaPredicted RBP16.42■□□□□ 0.22
PTPRN2-201ENST00000389413 SCHIP1Q9P0W5 487 aaPredicted RBP16.42■□□□□ 0.22
PTPRN2-201ENST00000389413 BTBD7Q9P203 1132 aa16.42■□□□□ 0.22
PTPRN2-201ENST00000389413 SLC12A4Q9UP95 1085 aa16.42■□□□□ 0.22
PTPRN2-201ENST00000389413 PRR5-ARHGAP8B1AHC4 643 aa16.42■□□□□ 0.22
PTPRN2-201ENST00000389413 HDAC3O15379 428 aa16.42■□□□□ 0.22
PTPRN2-201ENST00000389413 BAIAP3O94812 1187 aa16.42■□□□□ 0.22
PTPRN2-201ENST00000389413 POMCP01189 267 aa16.42■□□□□ 0.22
PTPRN2-201ENST00000389413 ICAM3P32942 547 aa16.42■□□□□ 0.22
PTPRN2-201ENST00000389413 EPHX2P34913 555 aa16.42■□□□□ 0.22
PTPRN2-201ENST00000389413 ARHGAP8P85298 464 aa16.42■□□□□ 0.22
PTPRN2-201ENST00000389413 PLIN5Q00G26 463 aa16.42■□□□□ 0.22
PTPRN2-201ENST00000389413 ADCK1Q86TW2 530 aa16.42■□□□□ 0.22
PTPRN2-201ENST00000389413 OR9Q1Q8NGQ5 310 aa16.42■□□□□ 0.22
PTPRN2-201ENST00000389413 ZNF317Q96PQ6 595 aaPredicted RBP16.42■□□□□ 0.22
PTPRN2-201ENST00000389413 RAMP2O60895 175 aa16.42■□□□□ 0.22
PTPRN2-201ENST00000389413 LYPLA1O75608 230 aaPredicted RBP16.42■□□□□ 0.22
PTPRN2-201ENST00000389413 ERCC2P18074 760 aa16.42■□□□□ 0.22
PTPRN2-201ENST00000389413 TPSB2P20231 275 aa16.42■□□□□ 0.22
PTPRN2-201ENST00000389413 CYP2C18P33260 490 aa16.42■□□□□ 0.22
PTPRN2-201ENST00000389413 PLK1P53350 603 aa16.42■□□□□ 0.22
PTPRN2-201ENST00000389413 KRT33BQ14525 404 aa16.42■□□□□ 0.22
PTPRN2-201ENST00000389413 TPSAB1Q15661 275 aa16.42■□□□□ 0.22
PTPRN2-201ENST00000389413 C10orf107Q8IVU9 208 aa16.42■□□□□ 0.22
PTPRN2-201ENST00000389413 C1orf127Q8N9H9 656 aa16.42■□□□□ 0.22
PTPRN2-201ENST00000389413 P2RY11Q96G91 374 aa16.42■□□□□ 0.22
PTPRN2-201ENST00000389413 C7orf26Q96N11 449 aa16.42■□□□□ 0.22
PTPRN2-201ENST00000389413 COLEC11Q9BWP8 271 aa16.42■□□□□ 0.22
PTPRN2-201ENST00000389413 C12orf65Q9H3J6 166 aaKnown RBP16.42■□□□□ 0.22
PTPRN2-201ENST00000389413 SNX15Q9NRS6 342 aa16.42■□□□□ 0.22
PTPRN2-201ENST00000389413 SCN3BQ9NY72 215 aa16.42■□□□□ 0.22
PTPRN2-201ENST00000389413 NDUFAF1Q9Y375 327 aa16.42■□□□□ 0.22
PTPRN2-201ENST00000389413 NRCAMQ92823 1304 aa16.42■□□□□ 0.22
PTPRN2-201ENST00000389413 BCLAF3A2AJT9 711 aaKnown RBP16.41■□□□□ 0.22
PTPRN2-201ENST00000389413 RGSL1A5PLK6 1076 aa16.41■□□□□ 0.22
PTPRN2-201ENST00000389413 SAC3D1A6NKF1 404 aa16.41■□□□□ 0.22
PTPRN2-201ENST00000389413 M0R3G1 203 aa16.41■□□□□ 0.22
PTPRN2-201ENST00000389413 CELF2O95319 508 aaKnown RBP16.41■□□□□ 0.22
PTPRN2-201ENST00000389413 CD48P09326 243 aa16.41■□□□□ 0.22
PTPRN2-201ENST00000389413 TBX4P57082 545 aa16.41■□□□□ 0.22
PTPRN2-201ENST00000389413 PCBP1Q15365 356 aaKnown RBP eCLIP16.41■□□□□ 0.225e-7■■■■■ 32.6
PTPRN2-201ENST00000389413 CTXN3Q4LDR2 81 aa16.41■□□□□ 0.22
PTPRN2-201ENST00000389413 ATP6AP1LQ52LC2 224 aa16.41■□□□□ 0.22
PTPRN2-201ENST00000389413 AAGABQ6PD74 315 aa16.41■□□□□ 0.22
PTPRN2-201ENST00000389413 TLK2Q86UE8 772 aa16.41■□□□□ 0.22
PTPRN2-201ENST00000389413 PRPF18Q99633 342 aaKnown RBP16.41■□□□□ 0.22
PTPRN2-201ENST00000389413 MAF1Q9H063 256 aa16.41■□□□□ 0.22
PTPRN2-201ENST00000389413 NMRK1Q9NWW6 199 aa16.41■□□□□ 0.22
PTPRN2-201ENST00000389413 SYBUQ9NX95 663 aa16.41■□□□□ 0.22
PTPRN2-201ENST00000389413 DHX15O43143 795 aaKnown RBP16.41■□□□□ 0.22
PTPRN2-201ENST00000389413 ZMPSTE24O75844 475 aa16.41■□□□□ 0.22
PTPRN2-201ENST00000389413 FAM155BO75949 473 aa16.41■□□□□ 0.22
PTPRN2-201ENST00000389413 PSEN2P49810 448 aa16.41■□□□□ 0.22
PTPRN2-201ENST00000389413 KRT72Q14CN4 511 aa16.41■□□□□ 0.22
PTPRN2-201ENST00000389413 MRPL45Q9BRJ2 306 aaKnown RBP16.41■□□□□ 0.22
PTPRN2-201ENST00000389413 MID1IP1Q9NPA3 183 aa16.41■□□□□ 0.22
PTPRN2-201ENST00000389413 IRAK4Q9NWZ3 460 aa16.41■□□□□ 0.22
PTPRN2-201ENST00000389413 RAP2CQ9Y3L5 183 aa16.41■□□□□ 0.22
PTPRN2-201ENST00000389413 BDNFP23560 247 aa16.41■□□□□ 0.22
PTPRN2-201ENST00000389413 ALDH1A3P47895 512 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms