RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 SOX13Q9UN79 622 aa5.09□□□□□ -1.6
LTN1-202ENST00000389194 TDRKHQ9Y2W6 561 aaKnown RBP5.09□□□□□ -1.6
LTN1-202ENST00000389194 AAR2Q9Y312 384 aaKnown RBP5.09□□□□□ -1.6
LTN1-202ENST00000389194 FAM95CA0A1B0GW59 222 aa5.09□□□□□ -1.6
LTN1-202ENST00000389194 KANSL1LA0AUZ9 987 aa5.09□□□□□ -1.6
LTN1-202ENST00000389194 TBKBP1A7MCY6 615 aa5.09□□□□□ -1.6
LTN1-202ENST00000389194 IQCF5A8MTL0 148 aa5.09□□□□□ -1.6
LTN1-202ENST00000389194 C9IYK1 514 aa5.09□□□□□ -1.6
LTN1-202ENST00000389194 APOC4-APOC2K7ER74 178 aa5.09□□□□□ -1.6
LTN1-202ENST00000389194 UGT1A9O60656 530 aa5.09□□□□□ -1.6
LTN1-202ENST00000389194 APOC2P02655 101 aa5.09□□□□□ -1.6
LTN1-202ENST00000389194 CTPS1P17812 591 aa5.09□□□□□ -1.6
LTN1-202ENST00000389194 ABL2P42684 1182 aa5.09□□□□□ -1.6
LTN1-202ENST00000389194 CD151P48509 253 aa5.09□□□□□ -1.6
LTN1-202ENST00000389194 GJA9P57773 515 aa5.09□□□□□ -1.6
LTN1-202ENST00000389194 CRYMQ14894 314 aa5.09□□□□□ -1.6
LTN1-202ENST00000389194 ZNF484Q5JVG2 852 aa5.09□□□□□ -1.6
LTN1-202ENST00000389194 ANKS1BQ7Z6G8 1248 aa5.09□□□□□ -1.6
LTN1-202ENST00000389194 IQCKQ8N0W5 287 aa5.09□□□□□ -1.6
LTN1-202ENST00000389194 C2orf73Q8N5S3 287 aaPredicted RBP5.09□□□□□ -1.6
LTN1-202ENST00000389194 ATP6V0D2Q8N8Y2 350 aa5.09□□□□□ -1.6
LTN1-202ENST00000389194 CATSPER1Q8NEC5 780 aa5.09□□□□□ -1.6
LTN1-202ENST00000389194 FEM1CQ96JP0 617 aa5.09□□□□□ -1.6
LTN1-202ENST00000389194 UGT1A7Q9HAW7 530 aa5.09□□□□□ -1.6
LTN1-202ENST00000389194 UGT1A10Q9HAW8 530 aa5.09□□□□□ -1.6
LTN1-202ENST00000389194 UGT1A8Q9HAW9 530 aa5.09□□□□□ -1.6
LTN1-202ENST00000389194 TBC1D23Q9NUY8 699 aa5.09□□□□□ -1.6
LTN1-202ENST00000389194 MAP10Q9P2G4 905 aa5.09□□□□□ -1.6
LTN1-202ENST00000389194 U3KQV3 271 aa5.09□□□□□ -1.6
LTN1-202ENST00000389194 TTC24A2A3L6 582 aaPredicted RBP5.08□□□□□ -1.6
LTN1-202ENST00000389194 F8W810 466 aa5.08□□□□□ -1.6
LTN1-202ENST00000389194 HS6ST1O60243 411 aa5.08□□□□□ -1.6
LTN1-202ENST00000389194 TRUB2O95900 331 aaKnown RBP5.08□□□□□ -1.6
LTN1-202ENST00000389194 SERPINE1P05121 402 aa5.08□□□□□ -1.6
LTN1-202ENST00000389194 HSPA1AP0DMV8 641 aaKnown RBP5.08□□□□□ -1.6
LTN1-202ENST00000389194 HSPA1BP0DMV9 641 aaKnown RBP5.08□□□□□ -1.6
LTN1-202ENST00000389194 IFNA8P32881 189 aa5.08□□□□□ -1.6
LTN1-202ENST00000389194 BRCC3P46736 316 aa5.08□□□□□ -1.6
LTN1-202ENST00000389194 CCNG1P51959 295 aa5.08□□□□□ -1.6
LTN1-202ENST00000389194 TBX4P57082 545 aa5.08□□□□□ -1.6
LTN1-202ENST00000389194 SNRPFP62306 86 aaKnown RBP5.08□□□□□ -1.6
LTN1-202ENST00000389194 CHRNB3Q05901 458 aa5.08□□□□□ -1.6
LTN1-202ENST00000389194 ALFQ53S48 1182 aa5.08□□□□□ -1.6
LTN1-202ENST00000389194 MFSD4BQ5TF39 518 aa5.08□□□□□ -1.6
LTN1-202ENST00000389194 TMPRSS6Q8IU80 811 aa5.08□□□□□ -1.6
LTN1-202ENST00000389194 TMEM130Q8N3G9 435 aa5.08□□□□□ -1.6
LTN1-202ENST00000389194 RDM1Q8NG50 284 aa5.08□□□□□ -1.6
LTN1-202ENST00000389194 SPPL2AQ8TCT8 520 aa5.08□□□□□ -1.6
LTN1-202ENST00000389194 SHC3Q92529 594 aa5.08□□□□□ -1.6
LTN1-202ENST00000389194 FOPNLQ96NB1 174 aa5.08□□□□□ -1.6
LTN1-202ENST00000389194 SLC7A5P2Q9GIP4 190 aa5.08□□□□□ -1.6
LTN1-202ENST00000389194 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.08□□□□□ -1.6
LTN1-202ENST00000389194 GTF2A1LQ9UNN4 478 aa5.08□□□□□ -1.6
LTN1-202ENST00000389194 MYH11P35749 1972 aa5.08□□□□□ -1.6
LTN1-202ENST00000389194 MRASO14807 208 aa5.08□□□□□ -1.6
LTN1-202ENST00000389194 KIF1CO43896 1103 aaKnown RBP5.08□□□□□ -1.6
LTN1-202ENST00000389194 SYNCRIPO60506 623 aaKnown RBP5.08□□□□□ -1.6
LTN1-202ENST00000389194 PSMG1O95456 288 aa5.08□□□□□ -1.6
LTN1-202ENST00000389194 LSM8O95777 96 aaKnown RBP5.08□□□□□ -1.6
LTN1-202ENST00000389194 CHI3L1P36222 383 aaPredicted RBP5.08□□□□□ -1.6
LTN1-202ENST00000389194 PRKCIP41743 596 aa5.08□□□□□ -1.6
LTN1-202ENST00000389194 SLC11A2P49281 568 aa5.08□□□□□ -1.6
LTN1-202ENST00000389194 TMED10P49755 219 aaKnown RBP5.08□□□□□ -1.6
LTN1-202ENST00000389194 POLD3Q15054 466 aaPredicted RBP5.08□□□□□ -1.6
LTN1-202ENST00000389194 ANGPT1Q15389 498 aa5.08□□□□□ -1.6
LTN1-202ENST00000389194 NPY5RQ15761 445 aa5.08□□□□□ -1.6
LTN1-202ENST00000389194 TRIM16LQ309B1 348 aa5.08□□□□□ -1.6
LTN1-202ENST00000389194 DDI2Q5TDH0 399 aa5.08□□□□□ -1.6
LTN1-202ENST00000389194 SH3BP5LQ7L8J4 393 aa5.08□□□□□ -1.6
LTN1-202ENST00000389194 OTOP3Q7RTS5 596 aa5.08□□□□□ -1.6
LTN1-202ENST00000389194 KATNAL2Q8IYT4 538 aa5.08□□□□□ -1.6
LTN1-202ENST00000389194 CYP4X1Q8N118 509 aa5.08□□□□□ -1.6
LTN1-202ENST00000389194 ALLCQ8N6M5 410 aa5.08□□□□□ -1.6
LTN1-202ENST00000389194 CLHC1Q8NHS4 586 aa5.08□□□□□ -1.6
LTN1-202ENST00000389194 METTL6Q8TCB7 284 aa5.08□□□□□ -1.6
LTN1-202ENST00000389194 PGM2Q96G03 612 aa5.08□□□□□ -1.6
LTN1-202ENST00000389194 KLHL25Q9H0H3 589 aa5.08□□□□□ -1.6
LTN1-202ENST00000389194 ZNF395Q9H8N7 513 aaPredicted RBP5.08□□□□□ -1.6
LTN1-202ENST00000389194 DDX3YO15523 660 aaKnown RBP5.08□□□□□ -1.6
LTN1-202ENST00000389194 RAMP2O60895 175 aa5.08□□□□□ -1.6
LTN1-202ENST00000389194 SEC22BO75396 215 aa5.08□□□□□ -1.6
LTN1-202ENST00000389194 LRPAP1P30533 357 aa5.08□□□□□ -1.6
LTN1-202ENST00000389194 GPC1P35052 558 aa5.08□□□□□ -1.6
LTN1-202ENST00000389194 GRIA4P48058 902 aa5.08□□□□□ -1.6
LTN1-202ENST00000389194 NEK2P51955 445 aa5.08□□□□□ -1.6
LTN1-202ENST00000389194 GTF2BQ00403 316 aa5.08□□□□□ -1.6
LTN1-202ENST00000389194 PLD1Q13393 1074 aa5.08□□□□□ -1.6
LTN1-202ENST00000389194 OR9Q1Q8NGQ5 310 aa5.08□□□□□ -1.6
LTN1-202ENST00000389194 ESAMQ96AP7 390 aa5.08□□□□□ -1.6
LTN1-202ENST00000389194 SHISA4Q96DD7 197 aa5.08□□□□□ -1.6
LTN1-202ENST00000389194 IDI2Q9BXS1 227 aa5.08□□□□□ -1.6
LTN1-202ENST00000389194 NRDE2Q9H7Z3 1164 aa5.08□□□□□ -1.6
LTN1-202ENST00000389194 ATP13A1Q9HD20 1204 aa5.08□□□□□ -1.6
LTN1-202ENST00000389194 TRPC4Q9UBN4 977 aa5.08□□□□□ -1.6
LTN1-202ENST00000389194 C2CD2Q9Y426 696 aa5.08□□□□□ -1.6
LTN1-202ENST00000389194 DISP2A7MBM2 1401 aa5.08□□□□□ -1.6
LTN1-202ENST00000389194 SCAMP1O15126 338 aa5.08□□□□□ -1.6
LTN1-202ENST00000389194 LZTS3O60299 673 aaPredicted RBP5.08□□□□□ -1.6
LTN1-202ENST00000389194 CYP1A2P05177 515 aa5.08□□□□□ -1.6
LTN1-202ENST00000389194 CCDC159P0C7I6 412 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms