RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 PAPOLAP51003 745 aaKnown RBP27.5■■□□□ 1.99
MSX1-201ENST00000382723 CAV1Q03135 178 aa27.5■■□□□ 1.99
MSX1-201ENST00000382723 KCNC3Q14003 757 aa27.5■■□□□ 1.99
MSX1-201ENST00000382723 C5orf22Q49AR2 442 aa27.5■■□□□ 1.99
MSX1-201ENST00000382723 RNASEH2BQ5TBB1 312 aaKnown RBP27.5■■□□□ 1.99
MSX1-201ENST00000382723 FAXCQ5TGI0 409 aa27.5■■□□□ 1.99
MSX1-201ENST00000382723 RHBDF2Q6PJF5 856 aa27.5■■□□□ 1.99
MSX1-201ENST00000382723 Q6ZNB5 142 aa27.5■■□□□ 1.99
MSX1-201ENST00000382723 ARHGEF18Q6ZSZ5 1173 aa27.5■■□□□ 1.99
MSX1-201ENST00000382723 CCDC13Q8IYE1 715 aa27.5■■□□□ 1.99
MSX1-201ENST00000382723 UMODL1-AS1Q8N2C9 162 aa27.5■■□□□ 1.99
MSX1-201ENST00000382723 FUT8Q9BYC5 575 aa27.5■■□□□ 1.99
MSX1-201ENST00000382723 FAM129AQ9BZQ8 928 aa27.5■■□□□ 1.99
MSX1-201ENST00000382723 SFXN1Q9H9B4 322 aa27.5■■□□□ 1.99
MSX1-201ENST00000382723 RAB6BQ9NRW1 208 aa27.5■■□□□ 1.99
MSX1-201ENST00000382723 ZNF212Q9UDV6 495 aa27.5■■□□□ 1.99
MSX1-201ENST00000382723 CCL26Q9Y258 94 aa27.5■■□□□ 1.99
MSX1-201ENST00000382723 MRPS23Q9Y3D9 190 aaKnown RBP27.5■■□□□ 1.99
MSX1-201ENST00000382723 WASHC5Q12768 1159 aa27.49■■□□□ 1.99
MSX1-201ENST00000382723 CASP8Q14790 479 aa27.49■■□□□ 1.99
MSX1-201ENST00000382723 ANKRD20A2Q5SQ80 823 aa27.49■■□□□ 1.99
MSX1-201ENST00000382723 SYCP2LQ5T4T6 812 aa27.49■■□□□ 1.99
MSX1-201ENST00000382723 ANKRD20A1Q5TYW2 823 aa27.49■■□□□ 1.99
MSX1-201ENST00000382723 ANKRD20A3Q5VUR7 823 aa27.49■■□□□ 1.99
MSX1-201ENST00000382723 CCDC25Q86WR0 208 aa27.49■■□□□ 1.99
MSX1-201ENST00000382723 CPT1BQ92523 772 aa27.49■■□□□ 1.99
MSX1-201ENST00000382723 PWWP2AQ96N64 755 aa27.49■■□□□ 1.99
MSX1-201ENST00000382723 APOL5Q9BWW9 433 aa27.49■■□□□ 1.99
MSX1-201ENST00000382723 STOML2Q9UJZ1 356 aa27.49■■□□□ 1.99
MSX1-201ENST00000382723 A0A0A0MRY4 1105 aa27.49■■□□□ 1.99
MSX1-201ENST00000382723 ZNF197O14709 1029 aa27.49■■□□□ 1.99
MSX1-201ENST00000382723 LATS1O95835 1130 aa27.49■■□□□ 1.99
MSX1-201ENST00000382723 CEBPBP17676 345 aa27.49■■□□□ 1.99
MSX1-201ENST00000382723 NDST2P52849 883 aa27.49■■□□□ 1.99
MSX1-201ENST00000382723 DHX9Q08211 1270 aaKnown RBP27.49■■□□□ 1.99
MSX1-201ENST00000382723 HDXQ7Z353 690 aa27.49■■□□□ 1.99
MSX1-201ENST00000382723 SH3RF2Q8TEC5 729 aa27.49■■□□□ 1.99
MSX1-201ENST00000382723 SPATA13Q96N96 652 aa27.49■■□□□ 1.99
MSX1-201ENST00000382723 ARHGAP26Q9UNA1 814 aa27.49■■□□□ 1.99
MSX1-201ENST00000382723 F5H423 210 aaPredicted RBP27.48■■□□□ 1.99
MSX1-201ENST00000382723 CHKAP35790 457 aa27.48■■□□□ 1.99
MSX1-201ENST00000382723 MORF4L2Q15014 288 aa27.48■■□□□ 1.99
MSX1-201ENST00000382723 RARS2Q5T160 578 aaKnown RBP27.48■■□□□ 1.99
MSX1-201ENST00000382723 ANKRD22Q5VYY1 191 aa27.48■■□□□ 1.99
MSX1-201ENST00000382723 HTR3DQ70Z44 454 aa27.48■■□□□ 1.99
MSX1-201ENST00000382723 PCGF5Q86SE9 256 aa27.48■■□□□ 1.99
MSX1-201ENST00000382723 ZNF354CQ86Y25 554 aa27.48■■□□□ 1.99
MSX1-201ENST00000382723 PPIL6Q8IXY8 311 aa27.48■■□□□ 1.99
MSX1-201ENST00000382723 ITFG1Q8TB96 612 aa27.48■■□□□ 1.99
MSX1-201ENST00000382723 HMCESQ96FZ2 354 aa27.48■■□□□ 1.99
MSX1-201ENST00000382723 DNAJC17Q9NVM6 304 aaKnown RBP27.48■■□□□ 1.99
MSX1-201ENST00000382723 RASA4BC9J798 803 aa27.47■■□□□ 1.99
MSX1-201ENST00000382723 RASA4O43374 803 aa27.47■■□□□ 1.99
MSX1-201ENST00000382723 METTL18O95568 372 aa27.47■■□□□ 1.99
MSX1-201ENST00000382723 PTPN3P26045 913 aa27.47■■□□□ 1.99
MSX1-201ENST00000382723 MAPKAPK2P49137 400 aa27.47■■□□□ 1.99
MSX1-201ENST00000382723 CBX2Q14781 532 aaPredicted RBP27.47■■□□□ 1.99
MSX1-201ENST00000382723 TCEAL5Q5H9L2 206 aa27.47■■□□□ 1.99
MSX1-201ENST00000382723 TMC3Q7Z5M5 1100 aa27.47■■□□□ 1.99
MSX1-201ENST00000382723 BBS7Q8IWZ6 715 aa27.47■■□□□ 1.99
MSX1-201ENST00000382723 ZNF567Q8N184 647 aa27.47■■□□□ 1.99
MSX1-201ENST00000382723 DOCK6Q96HP0 2047 aa27.47■■□□□ 1.99
MSX1-201ENST00000382723 ZSWIM3Q96MP5 696 aa27.47■■□□□ 1.99
MSX1-201ENST00000382723 ZNF576Q9H609 170 aa27.47■■□□□ 1.99
MSX1-201ENST00000382723 NSUN3Q9H649 340 aaKnown RBP27.47■■□□□ 1.99
MSX1-201ENST00000382723 ATP8A1Q9Y2Q0 1164 aa27.47■■□□□ 1.99
MSX1-201ENST00000382723 FARP1Q9Y4F1 1045 aaPredicted RBP27.47■■□□□ 1.99
MSX1-201ENST00000382723 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP27.47■■□□□ 1.99
MSX1-201ENST00000382723 GOLGA8MH3BSY2 632 aa27.47■■□□□ 1.99
MSX1-201ENST00000382723 LINC01565O15544 149 aa27.47■■□□□ 1.99
MSX1-201ENST00000382723 MAFKO60675 156 aa27.47■■□□□ 1.99
MSX1-201ENST00000382723 RAMP2O60895 175 aa27.47■■□□□ 1.99
MSX1-201ENST00000382723 SASH3O75995 380 aa27.47■■□□□ 1.99
MSX1-201ENST00000382723 NUMBP49757 651 aa27.47■■□□□ 1.99
MSX1-201ENST00000382723 CDH4P55283 916 aa27.47■■□□□ 1.99
MSX1-201ENST00000382723 HYAL1Q12794 435 aa27.47■■□□□ 1.99
MSX1-201ENST00000382723 TSEN2Q8NCE0 465 aaKnown RBP27.47■■□□□ 1.99
MSX1-201ENST00000382723 USP13Q92995 863 aaPredicted RBP27.47■■□□□ 1.99
MSX1-201ENST00000382723 ZBTB9Q96C00 473 aa27.47■■□□□ 1.99
MSX1-201ENST00000382723 TSGA13Q96PP4 275 aa27.47■■□□□ 1.99
MSX1-201ENST00000382723 DZANK1Q9NVP4 752 aa27.47■■□□□ 1.99
MSX1-201ENST00000382723 KLHL8Q9P2G9 620 aaPredicted RBP27.47■■□□□ 1.99
MSX1-201ENST00000382723 TCRBV7S3A2A0A539 114 aa27.46■■□□□ 1.99
MSX1-201ENST00000382723 CCNCP24863 283 aa27.46■■□□□ 1.99
MSX1-201ENST00000382723 ZBTB17Q13105 803 aa27.46■■□□□ 1.99
MSX1-201ENST00000382723 POLD3Q15054 466 aaPredicted RBP27.46■■□□□ 1.99
MSX1-201ENST00000382723 PID1Q7Z2X4 250 aa27.46■■□□□ 1.99
MSX1-201ENST00000382723 PRCCQ92733 491 aaPredicted RBP27.46■■□□□ 1.99
MSX1-201ENST00000382723 PRO3102Q9H379 93 aa27.46■■□□□ 1.99
MSX1-201ENST00000382723 ETNK1Q9HBU6 452 aa27.46■■□□□ 1.99
MSX1-201ENST00000382723 DENND4CQ5VZ89 1909 aa27.46■■□□□ 1.99
MSX1-201ENST00000382723 ARHGAP42A6NI28 874 aa27.45■■□□□ 1.99
MSX1-201ENST00000382723 NDC80O14777 642 aa27.45■■□□□ 1.99
MSX1-201ENST00000382723 MTSS1O43312 755 aa27.45■■□□□ 1.99
MSX1-201ENST00000382723 OPHN1O60890 802 aa27.45■■□□□ 1.99
MSX1-201ENST00000382723 GLP2RO95838 553 aa27.45■■□□□ 1.99
MSX1-201ENST00000382723 POTEHQ6S545 545 aa27.45■■□□□ 1.99
MSX1-201ENST00000382723 C4orf22Q6V702 233 aa27.45■■□□□ 1.99
MSX1-201ENST00000382723 NAT8LQ8N9F0 302 aa27.45■■□□□ 1.99
MSX1-201ENST00000382723 USP33Q8TEY7 942 aa27.45■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms