RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 MGAT1P26572 445 aa20.32■□□□□ 0.84
PDLIM5-205ENST00000380180 CRADDP78560 199 aa20.32■□□□□ 0.84
PDLIM5-205ENST00000380180 OLIG2Q13516 323 aa20.32■□□□□ 0.84
PDLIM5-205ENST00000380180 ZNF683Q8IZ20 524 aa20.32■□□□□ 0.84
PDLIM5-205ENST00000380180 C4orf33Q8N1A6 199 aa20.32■□□□□ 0.84
PDLIM5-205ENST00000380180 SLC39A11Q8N1S5 342 aa20.32■□□□□ 0.84
PDLIM5-205ENST00000380180 ATPAF2Q8N5M1 289 aa20.32■□□□□ 0.84
PDLIM5-205ENST00000380180 ZNF461Q8TAF7 563 aa20.32■□□□□ 0.84
PDLIM5-205ENST00000380180 MZB1Q8WU39 189 aa20.32■□□□□ 0.84
PDLIM5-205ENST00000380180 DYDC1Q8WWB3 177 aa20.32■□□□□ 0.84
PDLIM5-205ENST00000380180 STAMBPL1Q96FJ0 436 aa20.32■□□□□ 0.84
PDLIM5-205ENST00000380180 CHMP6Q96FZ7 201 aa20.32■□□□□ 0.84
PDLIM5-205ENST00000380180 TMEM169Q96HH4 297 aa20.32■□□□□ 0.84
PDLIM5-205ENST00000380180 BTN2A3PQ96KV6 586 aa20.32■□□□□ 0.84
PDLIM5-205ENST00000380180 ZNF317Q96PQ6 595 aaPredicted RBP20.32■□□□□ 0.84
PDLIM5-205ENST00000380180 SMC6Q96SB8 1091 aa20.32■□□□□ 0.84
PDLIM5-205ENST00000380180 CCDC134Q9H6E4 229 aa20.32■□□□□ 0.84
PDLIM5-205ENST00000380180 RC3H2Q9HBD1 1191 aaKnown RBP20.32■□□□□ 0.84
PDLIM5-205ENST00000380180 PCDHA11Q9Y5I1 949 aa20.32■□□□□ 0.84
PDLIM5-205ENST00000380180 IKBKGQ9Y6K9 419 aa20.32■□□□□ 0.84
PDLIM5-205ENST00000380180 ANAPC1Q9H1A4 1944 aa20.32■□□□□ 0.84
PDLIM5-205ENST00000380180 WASH4PA8MWX3 477 aa20.32■□□□□ 0.84
PDLIM5-205ENST00000380180 CXorf49A8MYA2 514 aaPredicted RBP20.32■□□□□ 0.84
PDLIM5-205ENST00000380180 TLR5O60602 858 aa20.32■□□□□ 0.84
PDLIM5-205ENST00000380180 MAFKO60675 156 aa20.32■□□□□ 0.84
PDLIM5-205ENST00000380180 AP2A1O95782 977 aa20.32■□□□□ 0.84
PDLIM5-205ENST00000380180 IGLV3-27P01718 113 aa20.32■□□□□ 0.84
PDLIM5-205ENST00000380180 BTG3Q14201 252 aaPredicted RBP20.32■□□□□ 0.84
PDLIM5-205ENST00000380180 ITPRIPL1Q6GPH6 555 aa20.32■□□□□ 0.84
PDLIM5-205ENST00000380180 CASC4Q6P4E1 433 aa20.32■□□□□ 0.84
PDLIM5-205ENST00000380180 GSDMBQ8TAX9 411 aa20.32■□□□□ 0.84
PDLIM5-205ENST00000380180 USP33Q8TEY7 942 aa20.32■□□□□ 0.84
PDLIM5-205ENST00000380180 NKIRAS1Q9NYS0 192 aa20.32■□□□□ 0.84
PDLIM5-205ENST00000380180 AFF4Q9UHB7 1163 aaKnown RBP20.32■□□□□ 0.84
PDLIM5-205ENST00000380180 FAM47DPA6NHR8 397 aa20.31■□□□□ 0.84
PDLIM5-205ENST00000380180 ARHGAP42A6NI28 874 aa20.31■□□□□ 0.84
PDLIM5-205ENST00000380180 ABLIM3O94929 683 aa20.31■□□□□ 0.84
PDLIM5-205ENST00000380180 INHBAP08476 426 aa20.31■□□□□ 0.84
PDLIM5-205ENST00000380180 CCNB1P14635 433 aa20.31■□□□□ 0.84
PDLIM5-205ENST00000380180 WDR5P61964 334 aaKnown RBP20.31■□□□□ 0.84
PDLIM5-205ENST00000380180 DSG1Q02413 1049 aa20.31■□□□□ 0.84
PDLIM5-205ENST00000380180 AFMIDQ63HM1 303 aa20.31■□□□□ 0.84
PDLIM5-205ENST00000380180 KCTD11Q693B1 232 aa20.31■□□□□ 0.84
PDLIM5-205ENST00000380180 TRMT10BQ6PF06 316 aaKnown RBP20.31■□□□□ 0.84
PDLIM5-205ENST00000380180 CTAGE3PQ8IX95 158 aa20.31■□□□□ 0.84
PDLIM5-205ENST00000380180 CNTD1Q8N815 330 aa20.31■□□□□ 0.84
PDLIM5-205ENST00000380180 PPM1NQ8N819 430 aa20.31■□□□□ 0.84
PDLIM5-205ENST00000380180 ARNTL2Q8WYA1 636 aa20.31■□□□□ 0.84
PDLIM5-205ENST00000380180 CEP295NLQ96MC4 621 aa20.31■□□□□ 0.84
PDLIM5-205ENST00000380180 SMYD2Q9NRG4 433 aa20.31■□□□□ 0.84
PDLIM5-205ENST00000380180 PRPF4O43172 522 aaKnown RBP eCLIP20.31■□□□□ 0.84
PDLIM5-205ENST00000380180 USP12O75317 370 aa20.31■□□□□ 0.84
PDLIM5-205ENST00000380180 SUN1O94901 812 aa20.31■□□□□ 0.84
PDLIM5-205ENST00000380180 ACRP10323 421 aa20.31■□□□□ 0.84
PDLIM5-205ENST00000380180 RAG1P15918 1043 aa20.31■□□□□ 0.84
PDLIM5-205ENST00000380180 KRT4P19013 534 aa20.31■□□□□ 0.84
PDLIM5-205ENST00000380180 TAX1BP1Q86VP1 789 aa20.31■□□□□ 0.84
PDLIM5-205ENST00000380180 LRRC6Q86X45 466 aa20.31■□□□□ 0.84
PDLIM5-205ENST00000380180 OR52K1Q8NGK4 314 aa20.31■□□□□ 0.84
PDLIM5-205ENST00000380180 GDAP1Q8TB36 358 aa20.31■□□□□ 0.84
PDLIM5-205ENST00000380180 MLPHQ9BV36 600 aaPredicted RBP20.31■□□□□ 0.84
PDLIM5-205ENST00000380180 ZYG11BQ9C0D3 744 aa20.31■□□□□ 0.84
PDLIM5-205ENST00000380180 FAM155BO75949 473 aa20.3■□□□□ 0.84
PDLIM5-205ENST00000380180 PAPOLAP51003 745 aaKnown RBP20.3■□□□□ 0.84
PDLIM5-205ENST00000380180 RING1Q06587 406 aa20.3■□□□□ 0.84
PDLIM5-205ENST00000380180 QPCTQ16769 361 aa20.3■□□□□ 0.84
PDLIM5-205ENST00000380180 ALFQ53S48 1182 aa20.3■□□□□ 0.84
PDLIM5-205ENST00000380180 RAP1GAP2Q684P5 730 aa20.3■□□□□ 0.84
PDLIM5-205ENST00000380180 FBXL22Q6P050 247 aa20.3■□□□□ 0.84
PDLIM5-205ENST00000380180 SLC26A11Q86WA9 606 aa20.3■□□□□ 0.84
PDLIM5-205ENST00000380180 NOL6Q9H6R4 1146 aaKnown RBP20.3■□□□□ 0.84
PDLIM5-205ENST00000380180 PPARGC1AQ9UBK2 798 aaKnown RBP20.3■□□□□ 0.84
PDLIM5-205ENST00000380180 IGLV3-10A0A075B6K4 115 aa20.29■□□□□ 0.84
PDLIM5-205ENST00000380180 IQANK1A0A1B0GTG1 560 aa20.29■□□□□ 0.84
PDLIM5-205ENST00000380180 ERI2A8K979 691 aaKnown RBP20.29■□□□□ 0.84
PDLIM5-205ENST00000380180 KIAA0355O15063 1070 aa20.29■□□□□ 0.84
PDLIM5-205ENST00000380180 MATN3O15232 486 aa20.29■□□□□ 0.84
PDLIM5-205ENST00000380180 CNTN5O94779 1100 aa20.29■□□□□ 0.84
PDLIM5-205ENST00000380180 RHOQP17081 205 aa20.29■□□□□ 0.84
PDLIM5-205ENST00000380180 DRD4P21917 467 aa20.29■□□□□ 0.84
PDLIM5-205ENST00000380180 STEAP4Q687X5 459 aa20.29■□□□□ 0.84
PDLIM5-205ENST00000380180 NUGGCQ68CJ6 796 aa20.29■□□□□ 0.84
PDLIM5-205ENST00000380180 OTOP3Q7RTS5 596 aa20.29■□□□□ 0.84
PDLIM5-205ENST00000380180 TFAP2DQ7Z6R9 452 aa20.29■□□□□ 0.84
PDLIM5-205ENST00000380180 CPLX4Q7Z7G2 160 aa20.29■□□□□ 0.84
PDLIM5-205ENST00000380180 ZNF512Q96ME7 567 aaPredicted RBP20.29■□□□□ 0.84
PDLIM5-205ENST00000380180 CYP4F11Q9HBI6 524 aa20.29■□□□□ 0.84
PDLIM5-205ENST00000380180 SYBUQ9NX95 663 aa20.29■□□□□ 0.84
PDLIM5-205ENST00000380180 MOCS1Q9NZB8 636 aa20.29■□□□□ 0.84
PDLIM5-205ENST00000380180 UBP1Q9NZI7 540 aa20.29■□□□□ 0.84
PDLIM5-205ENST00000380180 SMG5Q9UPR3 1016 aaKnown RBP20.29■□□□□ 0.84
PDLIM5-205ENST00000380180 EBAG9O00559 213 aa20.29■□□□□ 0.84
PDLIM5-205ENST00000380180 TYROBPO43914 113 aa20.29■□□□□ 0.84
PDLIM5-205ENST00000380180 SLC18A1P54219 525 aa20.29■□□□□ 0.84
PDLIM5-205ENST00000380180 TPGS2Q68CL5 300 aa20.29■□□□□ 0.84
PDLIM5-205ENST00000380180 CMTR2Q8IYT2 770 aaKnown RBP20.29■□□□□ 0.84
PDLIM5-205ENST00000380180 UMODL1-AS1Q8N2C9 162 aa20.29■□□□□ 0.84
PDLIM5-205ENST00000380180 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.29■□□□□ 0.84
PDLIM5-205ENST00000380180 DENND1AQ8TEH3 1009 aa20.29■□□□□ 0.84
PDLIM5-205ENST00000380180 CKAP2Q8WWK9 683 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms