RNA–Protein interactions for RNA: ENST00000380097.7

TRIM6-202, Transcript of tripartite motif containing 6, humanhuman

TSL 1 (best) BASIC

Gene TRIM6, Length 3,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-202ENST00000380097 PNPLA8Q9NP80 782 aa7.44□□□□□ -1.22
TRIM6-202ENST00000380097 WRAP73Q9P2S5 460 aaPredicted RBP7.44□□□□□ -1.22
TRIM6-202ENST00000380097 PTBP2Q9UKA9 531 aaKnown RBP7.44□□□□□ -1.22
TRIM6-202ENST00000380097 AURKCQ9UQB9 309 aa7.44□□□□□ -1.22
TRIM6-202ENST00000380097 KPNA7A9QM74 516 aa7.44□□□□□ -1.22
TRIM6-202ENST00000380097 TMEM114B3SHH9 223 aa7.44□□□□□ -1.22
TRIM6-202ENST00000380097 APOC4-APOC2K7ER74 178 aa7.44□□□□□ -1.22
TRIM6-202ENST00000380097 TRIM38O00635 465 aa7.44□□□□□ -1.22
TRIM6-202ENST00000380097 VAPBO95292 243 aa7.44□□□□□ -1.22
TRIM6-202ENST00000380097 HLA-DRAP01903 254 aa7.44□□□□□ -1.22
TRIM6-202ENST00000380097 APOC2P02655 101 aa7.44□□□□□ -1.22
TRIM6-202ENST00000380097 MAPTP10636 758 aaKnown RBP7.44□□□□□ -1.22
TRIM6-202ENST00000380097 IL1R1P14778 569 aa7.44□□□□□ -1.22
TRIM6-202ENST00000380097 CD247P20963 164 aa7.44□□□□□ -1.22
TRIM6-202ENST00000380097 CNTFP26441 200 aa7.44□□□□□ -1.22
TRIM6-202ENST00000380097 NOVP48745 357 aa7.44□□□□□ -1.22
TRIM6-202ENST00000380097 RPS6P62753 249 aaKnown RBP7.44□□□□□ -1.22
TRIM6-202ENST00000380097 CREB5Q02930 508 aa7.44□□□□□ -1.22
TRIM6-202ENST00000380097 TAP1Q03518 808 aa7.44□□□□□ -1.22
TRIM6-202ENST00000380097 CXCL9Q07325 125 aa7.44□□□□□ -1.22
TRIM6-202ENST00000380097 DMP1Q13316 513 aaPredicted RBP7.44□□□□□ -1.22
TRIM6-202ENST00000380097 PMS2P3Q13401 168 aa7.44□□□□□ -1.22
TRIM6-202ENST00000380097 BFSP2Q13515 415 aa7.44□□□□□ -1.22
TRIM6-202ENST00000380097 RAB39AQ14964 217 aa7.44□□□□□ -1.22
TRIM6-202ENST00000380097 PUS10Q3MIT2 529 aaKnown RBP7.44□□□□□ -1.22
TRIM6-202ENST00000380097 ARL13BQ3SXY8 428 aa7.44□□□□□ -1.22
TRIM6-202ENST00000380097 FAM47CQ5HY64 1035 aa7.44□□□□□ -1.22
TRIM6-202ENST00000380097 CYP4A22Q5TCH4 519 aa7.44□□□□□ -1.22
TRIM6-202ENST00000380097 ANKRD26P1Q6NSI1 321 aa7.44□□□□□ -1.22
TRIM6-202ENST00000380097 LRRC8EQ6NSJ5 796 aa7.44□□□□□ -1.22
TRIM6-202ENST00000380097 UNC5AQ6ZN44 842 aa7.44□□□□□ -1.22
TRIM6-202ENST00000380097 MCF2L2Q86YR7 1114 aa7.44□□□□□ -1.22
TRIM6-202ENST00000380097 ZNF781Q8N8C0 355 aa7.44□□□□□ -1.22
TRIM6-202ENST00000380097 ADAM32Q8TC27 787 aa7.44□□□□□ -1.22
TRIM6-202ENST00000380097 OR52B2Q96RD2 323 aa7.44□□□□□ -1.22
TRIM6-202ENST00000380097 SLC29A1Q99808 456 aa7.44□□□□□ -1.22
TRIM6-202ENST00000380097 KIFC3Q9BVG8 833 aa7.44□□□□□ -1.22
TRIM6-202ENST00000380097 ILKAPQ9H0C8 392 aaPredicted RBP7.44□□□□□ -1.22
TRIM6-202ENST00000380097 HMG20AQ9NP66 347 aa7.44□□□□□ -1.22
TRIM6-202ENST00000380097 CYP26B1Q9NR63 512 aa7.44□□□□□ -1.22
TRIM6-202ENST00000380097 AASDHPPTQ9NRN7 309 aa7.44□□□□□ -1.22
TRIM6-202ENST00000380097 PKD2L2Q9NZM6 624 aa7.44□□□□□ -1.22
TRIM6-202ENST00000380097 ERVK-11Q9UQG0 969 aa7.44□□□□□ -1.22
TRIM6-202ENST00000380097 SLC30A1Q9Y6M5 507 aa7.44□□□□□ -1.22
TRIM6-202ENST00000380097 NOTOA8MTQ0 251 aa7.43□□□□□ -1.22
TRIM6-202ENST00000380097 AMHP03971 560 aa7.43□□□□□ -1.22
TRIM6-202ENST00000380097 CYP3A4P08684 503 aa7.43□□□□□ -1.22
TRIM6-202ENST00000380097 ALOX5P09917 674 aa7.43□□□□□ -1.22
TRIM6-202ENST00000380097 NR4A1P22736 598 aa7.43□□□□□ -1.22
TRIM6-202ENST00000380097 KDELR1P24390 212 aa7.43□□□□□ -1.22
TRIM6-202ENST00000380097 PRKCHP24723 683 aa7.43□□□□□ -1.22
TRIM6-202ENST00000380097 PTPN7P35236 360 aa7.43□□□□□ -1.22
TRIM6-202ENST00000380097 CYP24A1Q07973 514 aa7.43□□□□□ -1.22
TRIM6-202ENST00000380097 CUL2Q13617 745 aa7.43□□□□□ -1.22
TRIM6-202ENST00000380097 SF3B4Q15427 424 aaKnown RBP eCLIP7.43□□□□□ -1.225e-8■■■■□ 21.4
TRIM6-202ENST00000380097 GPR162Q16538 588 aa7.43□□□□□ -1.22
TRIM6-202ENST00000380097 BSPRYQ5W0U4 402 aa7.43□□□□□ -1.22
TRIM6-202ENST00000380097 STYK1Q6J9G0 422 aa7.43□□□□□ -1.22
TRIM6-202ENST00000380097 KCTD8Q6ZWB6 473 aa7.43□□□□□ -1.22
TRIM6-202ENST00000380097 PCDH20Q8N6Y1 951 aaKnown RBP7.43□□□□□ -1.22
TRIM6-202ENST00000380097 ACER1Q8TDN7 264 aa7.43□□□□□ -1.22
TRIM6-202ENST00000380097 CRYGNQ8WXF5 182 aa7.43□□□□□ -1.22
TRIM6-202ENST00000380097 WDR18Q9BV38 432 aa7.43□□□□□ -1.22
TRIM6-202ENST00000380097 STRA6Q9BX79 667 aa7.43□□□□□ -1.22
TRIM6-202ENST00000380097 ANKRD60Q9BZ19 345 aa7.43□□□□□ -1.22
TRIM6-202ENST00000380097 SIAEQ9HAT2 523 aa7.43□□□□□ -1.22
TRIM6-202ENST00000380097 ZFYVE28Q9HCC9 887 aa7.43□□□□□ -1.22
TRIM6-202ENST00000380097 KMT5AQ9NQR1 393 aa7.43□□□□□ -1.22
TRIM6-202ENST00000380097 CNGB3Q9NQW8 809 aa7.43□□□□□ -1.22
TRIM6-202ENST00000380097 SMYD2Q9NRG4 433 aa7.43□□□□□ -1.22
TRIM6-202ENST00000380097 FBXO28Q9NVF7 368 aa7.43□□□□□ -1.22
TRIM6-202ENST00000380097 COPG2Q9UBF2 871 aa7.43□□□□□ -1.22
TRIM6-202ENST00000380097 TBX20Q9UMR3 447 aa7.43□□□□□ -1.22
TRIM6-202ENST00000380097 CORINQ9Y5Q5 1042 aa7.43□□□□□ -1.22
TRIM6-202ENST00000380097 ST14Q9Y5Y6 855 aa7.43□□□□□ -1.22
TRIM6-202ENST00000380097 ZNF536O15090 1300 aa7.43□□□□□ -1.22
TRIM6-202ENST00000380097 PLOD2O00469 737 aa7.43□□□□□ -1.22
TRIM6-202ENST00000380097 CLOCKO15516 846 aa7.43□□□□□ -1.22
TRIM6-202ENST00000380097 MGEA5O60502 916 aa7.43□□□□□ -1.22
TRIM6-202ENST00000380097 KRT3P12035 628 aa7.43□□□□□ -1.22
TRIM6-202ENST00000380097 TFE3P19532 575 aaPredicted RBP7.43□□□□□ -1.22
TRIM6-202ENST00000380097 MMP8P22894 467 aa7.43□□□□□ -1.22
TRIM6-202ENST00000380097 SERPINB1P30740 379 aa7.43□□□□□ -1.22
TRIM6-202ENST00000380097 POLR2BP30876 1174 aaKnown RBP7.43□□□□□ -1.22
TRIM6-202ENST00000380097 GARSP41250 739 aaKnown RBP7.43□□□□□ -1.22
TRIM6-202ENST00000380097 RPS3AP61247 264 aaKnown RBP7.43□□□□□ -1.22
TRIM6-202ENST00000380097 GTF2BQ00403 316 aa7.43□□□□□ -1.22
TRIM6-202ENST00000380097 NFATC3Q12968 1075 aa7.43□□□□□ -1.22
TRIM6-202ENST00000380097 ZNF846Q147U1 533 aa7.43□□□□□ -1.22
TRIM6-202ENST00000380097 PGS1Q32NB8 556 aa7.43□□□□□ -1.22
TRIM6-202ENST00000380097 SEL1L3Q68CR1 1132 aa7.43□□□□□ -1.22
TRIM6-202ENST00000380097 APOBEC3HQ6NTF7 200 aaKnown RBP7.43□□□□□ -1.22
TRIM6-202ENST00000380097 DCLRE1AQ6PJP8 1040 aa7.43□□□□□ -1.22
TRIM6-202ENST00000380097 RNF19BQ6ZMZ0 732 aa7.43□□□□□ -1.22
TRIM6-202ENST00000380097 IGFN1Q86VF2 1251 aa7.43□□□□□ -1.22
TRIM6-202ENST00000380097 CAMK1DQ8IU85 385 aa7.43□□□□□ -1.22
TRIM6-202ENST00000380097 GPD1LQ8N335 351 aa7.43□□□□□ -1.22
TRIM6-202ENST00000380097 FNIP1Q8TF40 1166 aa7.43□□□□□ -1.22
TRIM6-202ENST00000380097 ZNF606Q8WXB4 792 aa7.43□□□□□ -1.22
TRIM6-202ENST00000380097 NPAS2Q99743 824 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms