RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 UGT2B4P06133 528 aa8.68□□□□□ -1.02
NHLRC3-201ENST00000379599 RPL17P18621 184 aaKnown RBP8.68□□□□□ -1.02
NHLRC3-201ENST00000379599 ALAS2P22557 587 aa8.68□□□□□ -1.02
NHLRC3-201ENST00000379599 TNNI2P48788 182 aa8.68□□□□□ -1.02
NHLRC3-201ENST00000379599 GPR85P60893 370 aa8.68□□□□□ -1.02
NHLRC3-201ENST00000379599 MMRN1Q13201 1228 aa8.68□□□□□ -1.02
NHLRC3-201ENST00000379599 C5orf22Q49AR2 442 aa8.68□□□□□ -1.02
NHLRC3-201ENST00000379599 ESCO1Q5FWF5 840 aa8.68□□□□□ -1.02
NHLRC3-201ENST00000379599 HABP4Q5JVS0 413 aaKnown RBP8.68□□□□□ -1.02
NHLRC3-201ENST00000379599 VWA5B1Q5TIE3 1220 aa8.68□□□□□ -1.02
NHLRC3-201ENST00000379599 PLEKHM3Q6ZWE6 761 aa8.68□□□□□ -1.02
NHLRC3-201ENST00000379599 LGI2Q8N0V4 545 aa8.68□□□□□ -1.02
NHLRC3-201ENST00000379599 LRRC47Q8N1G4 583 aaKnown RBP8.68□□□□□ -1.02
NHLRC3-201ENST00000379599 SNX31Q8N9S9 440 aa8.68□□□□□ -1.02
NHLRC3-201ENST00000379599 GLIS1Q8NBF1 620 aa8.68□□□□□ -1.02
NHLRC3-201ENST00000379599 RAD54LQ92698 747 aa8.68□□□□□ -1.02
NHLRC3-201ENST00000379599 CEP95Q96GE4 821 aa8.68□□□□□ -1.02
NHLRC3-201ENST00000379599 RMDN3Q96TC7 470 aa8.68□□□□□ -1.02
NHLRC3-201ENST00000379599 USB1Q9BQ65 265 aaKnown RBP8.68□□□□□ -1.02
NHLRC3-201ENST00000379599 IFT22Q9H7X7 185 aa8.68□□□□□ -1.02
NHLRC3-201ENST00000379599 NTN4Q9HB63 628 aa8.68□□□□□ -1.02
NHLRC3-201ENST00000379599 IGSF5Q9NSI5 407 aa8.68□□□□□ -1.02
NHLRC3-201ENST00000379599 FETUBQ9UGM5 382 aa8.68□□□□□ -1.02
NHLRC3-201ENST00000379599 CNOT11Q9UKZ1 510 aaKnown RBP8.68□□□□□ -1.02
NHLRC3-201ENST00000379599 PCDHA6Q9UN73 950 aa8.68□□□□□ -1.02
NHLRC3-201ENST00000379599 PCDHA8Q9Y5H6 950 aa8.68□□□□□ -1.02
NHLRC3-201ENST00000379599 CHD4Q14839 1912 aa8.68□□□□□ -1.02
NHLRC3-201ENST00000379599 PIK3C2BO00750 1634 aa8.68□□□□□ -1.02
NHLRC3-201ENST00000379599 DENND3A2RUS2 1198 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 PRR23AA6NEV1 266 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 C16orf96A6NNT2 1141 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 STX16-NPEPL1H3BU86 382 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 KLF11O14901 512 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 AKAP10O43572 662 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 KCNK2O95069 426 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 TDP2O95551 362 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 RALAP11233 206 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 MMP8P22894 467 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 MARSP56192 900 aaKnown RBP8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 IL1RL1Q01638 556 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 TAP1Q03518 808 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 CES4AQ5XG92 561 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 DESI1Q6ICB0 168 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 CRTC3Q6UUV7 619 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 KCNK18Q7Z418 384 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 ADCK1Q86TW2 530 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 CDH24Q86UP0 819 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 UROC1Q96N76 676 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 PNMA5Q96PV4 448 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 KCNN2Q9H2S1 579 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 MCCC2Q9HCC0 563 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 COPG2Q9UBF2 871 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 AP4E1Q9UPM8 1137 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 PLEKHG3A1L390 1219 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 M0R3G1 203 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 MAP3K6O95382 1288 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 ATP5BP06576 529 aaKnown RBP8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 BMP4P12644 408 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 ME2P23368 584 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 TBXAS1P24557 533 aaPredicted RBP8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 AP2S1P53680 142 aaPredicted RBP8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 EN1Q05925 392 aaPredicted RBP8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 TROAPQ12815 778 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 BNIP2Q12982 314 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 LAMC2Q13753 1193 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 COG2Q14746 738 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 HIF1AQ16665 826 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 PRR16Q569H4 304 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 C1orf141Q5JVX7 400 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 KRT79Q5XKE5 535 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 ADGRG5Q8IZF4 528 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 PARP8Q8N3A8 854 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 NAT16Q8N8M0 369 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 DCAKDQ8WVC6 231 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 CDKL2Q92772 493 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 SNAPC3Q92966 411 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 CD101Q93033 1021 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 HDAC11Q96DB2 347 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 BRIP1Q9BX63 1249 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 ANO3Q9BYT9 981 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 RHOBTB2Q9BYZ6 727 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 AKIP1Q9NQ31 210 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 MRPL40Q9NQ50 206 aaKnown RBP8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 CNTN3Q9P232 1028 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 CPNE7Q9UBL6 633 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 NUP50Q9UKX7 468 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 RIMKLBQ9ULI2 386 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 MAFFQ9ULX9 164 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 CCDC88AQ3V6T2 1871 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 A0A0X1KG70 313 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 RNF103-CHMP3A0A140T963 221 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 POTEMA6NI47 508 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 LRRIQ4A6NIV6 560 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 OR5K4A6NMS3 321 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 CLIC2O15247 247 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 RNMTO43148 476 aaKnown RBP8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 TBX1O43435 398 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 CPNE3O75131 537 aaKnown RBP8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 IL1BP01584 269 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 PRKCBP05771 671 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms