RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 KIAA0355O15063 1070 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 ELFN1P0C7U0 828 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 PRLRP16471 622 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 PON1P27169 355 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 TNFSF9P41273 254 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 SPIDRQ14159 915 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 HGSNATQ68CP4 663 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 FBXL6Q8N531 539 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 ELMO3Q96BJ8 720 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 TRIM43Q96BQ3 446 aaPredicted RBP6.69□□□□□ -1.34
NEDD9-202ENST00000379446 CNDP1Q96KN2 507 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 CNPPD1Q9BV87 410 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 PRKD2Q9BZL6 878 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 CYP3A43Q9HB55 503 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 CASS4Q9NQ75 786 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 METTL5Q9NRN9 209 aaKnown RBP6.69□□□□□ -1.34
NEDD9-202ENST00000379446 AGPAT3Q9NRZ7 376 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 GMIPQ9P107 970 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 UBA2Q9UBT2 640 aaPredicted RBP6.69□□□□□ -1.34
NEDD9-202ENST00000379446 MUC6Q6W4X9 2439 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 ISM1B1AKI9 464 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 ATMINO43313 823 aaPredicted RBP6.69□□□□□ -1.34
NEDD9-202ENST00000379446 SNUPNO95149 360 aaKnown RBP6.69□□□□□ -1.34
NEDD9-202ENST00000379446 FAM107AO95990 144 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 PRNPP04156 253 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 UGT2B4P06133 528 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 MMEP08473 750 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 HPGDP15428 266 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 NPY2RP49146 381 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 RWDD2BP57060 319 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 CUL2Q13617 745 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 IMPG1Q17R60 797 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 C11orf74Q86VG3 221 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 ZNF614Q8N883 585 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 RAPGEF5Q92565 580 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 RUBCNQ92622 972 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 TOP1MTQ969P6 601 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 FAR2Q96K12 515 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 RPL10LQ96L21 214 aaKnown RBP6.69□□□□□ -1.34
NEDD9-202ENST00000379446 GBP5Q96PP8 586 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 KLC2Q9H0B6 622 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 SLAMF7Q9NQ25 335 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 VPS51Q9UID3 782 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 GJD2Q9UKL4 321 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 MYH6P13533 1939 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 ICE1Q9Y2F5 2266 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 NOL4O94818 638 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 TRIM16O95361 564 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 APBB3O95704 486 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 KCNA2P16389 499 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 PTPN3P26045 913 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 SKP1P63208 163 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 BOP1Q14137 746 aaKnown RBP6.69□□□□□ -1.34
NEDD9-202ENST00000379446 UGCGQ16739 394 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 KIAA0319Q5VV43 1072 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 MLIPQ5VWP3 458 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 CEP128Q6ZU80 1094 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 PHYKPLQ8IUZ5 450 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 BRSK2Q8IWQ3 736 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 TPCN2Q8NHX9 752 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 SLC35G2Q8TBE7 412 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 CLEC4DQ8WXI8 215 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 EDAQ92838 391 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 ELMO2Q96JJ3 720 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 EXOC2Q96KP1 924 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 MCEEQ96PE7 176 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 ADGRE3Q9BY15 652 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 IMP3Q9NV31 184 aaKnown RBP6.69□□□□□ -1.34
NEDD9-202ENST00000379446 SAE1Q9UBE0 346 aaPredicted RBP6.69□□□□□ -1.34
NEDD9-202ENST00000379446 TMEM221A6NGB7 291 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 M0R296 226 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 PJA2O43164 708 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 TSPAN1O60635 241 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 MAP3K6O95382 1288 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 CCNE2O96020 404 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 IFNA16P05015 189 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 KLK3P07288 261 aaPredicted RBP6.69□□□□□ -1.34
NEDD9-202ENST00000379446 IL9P15248 144 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 GPD1P21695 349 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 CDH3P22223 829 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 DDX39BQ13838 428 aaKnown RBP6.69□□□□□ -1.34
NEDD9-202ENST00000379446 ARMC12Q5T9G4 340 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 USP45Q70EL2 814 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 FRMD5Q7Z6J6 570 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 SETD3Q86TU7 594 aaPredicted RBP6.69□□□□□ -1.34
NEDD9-202ENST00000379446 ZCCHC9Q8N567 271 aaKnown RBP6.69□□□□□ -1.34
NEDD9-202ENST00000379446 OSCP1Q8WVF1 389 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 SPIRE2Q8WWL2 714 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 LZICQ8WZA0 190 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 TMEM159Q96B96 161 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 TBK1Q9UHD2 729 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 SPAG17Q6Q759 2223 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 FAM155AB1AL88 458 aaPredicted RBP6.68□□□□□ -1.34
NEDD9-202ENST00000379446 APOL1O14791 398 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 GPC4O75487 556 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 ITGB1P05556 798 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 SERPINF2P08697 491 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 CTSAP10619 480 aa6.68□□□□□ -1.34
NEDD9-202ENST00000379446 ZFXP17010 805 aaPredicted RBP6.68□□□□□ -1.34
NEDD9-202ENST00000379446 HNRNPH3P31942 346 aaKnown RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms