RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 TEX264Q9Y6I9 313 aa19.91■□□□□ 0.78
SSU72-204ENST00000378726 KCNK1O00180 336 aa19.91■□□□□ 0.78
SSU72-204ENST00000378726 RAG1P15918 1043 aa19.91■□□□□ 0.78
SSU72-204ENST00000378726 TPSB2P20231 275 aa19.91■□□□□ 0.78
SSU72-204ENST00000378726 WDR4P57081 412 aaKnown RBP19.91■□□□□ 0.78
SSU72-204ENST00000378726 TBX4P57082 545 aa19.91■□□□□ 0.78
SSU72-204ENST00000378726 CBLBQ13191 982 aa19.91■□□□□ 0.78
SSU72-204ENST00000378726 TPSAB1Q15661 275 aa19.91■□□□□ 0.78
SSU72-204ENST00000378726 RNF43Q68DV7 783 aa19.91■□□□□ 0.78
SSU72-204ENST00000378726 PID1Q7Z2X4 250 aa19.91■□□□□ 0.78
SSU72-204ENST00000378726 ZNF567Q8N184 647 aa19.91■□□□□ 0.78
SSU72-204ENST00000378726 MIEF2Q96C03 454 aa19.91■□□□□ 0.78
SSU72-204ENST00000378726 SLC39A13Q96H72 371 aa19.91■□□□□ 0.78
SSU72-204ENST00000378726 PLCD4Q9BRC7 762 aa19.91■□□□□ 0.78
SSU72-204ENST00000378726 BRD8Q9H0E9 1235 aa19.91■□□□□ 0.78
SSU72-204ENST00000378726 RABGEF1Q9UJ41 708 aa19.91■□□□□ 0.78
SSU72-204ENST00000378726 C15orf41Q9Y2V0 281 aa19.91■□□□□ 0.78
SSU72-204ENST00000378726 F5H423 210 aaPredicted RBP19.9■□□□□ 0.78
SSU72-204ENST00000378726 ATP2A2P16615 1042 aaKnown RBP19.9■□□□□ 0.78
SSU72-204ENST00000378726 GCAP28676 217 aa19.9■□□□□ 0.78
SSU72-204ENST00000378726 MLLT6P55198 1093 aaPredicted RBP19.9■□□□□ 0.78
SSU72-204ENST00000378726 PPIDQ08752 370 aaKnown RBP19.9■□□□□ 0.78
SSU72-204ENST00000378726 FAM47EQ6ZV65 393 aa19.9■□□□□ 0.78
SSU72-204ENST00000378726 MAML1Q92585 1016 aa19.9■□□□□ 0.78
SSU72-204ENST00000378726 CELF6Q96J87 481 aaKnown RBP19.9■□□□□ 0.78
SSU72-204ENST00000378726 ZNF558Q96NG5 402 aa19.9■□□□□ 0.78
SSU72-204ENST00000378726 PAIP2Q9BPZ3 127 aaKnown RBP19.9■□□□□ 0.78
SSU72-204ENST00000378726 PCDH10Q9P2E7 1040 aa19.9■□□□□ 0.78
SSU72-204ENST00000378726 KLHL14Q9P2G3 628 aa19.9■□□□□ 0.78
SSU72-204ENST00000378726 MAGED2Q9UNF1 606 aaPredicted RBP19.9■□□□□ 0.78
SSU72-204ENST00000378726 HS3ST4Q9Y661 456 aa19.9■□□□□ 0.78
SSU72-204ENST00000378726 SLC38A8A6NNN8 435 aa19.9■□□□□ 0.78
SSU72-204ENST00000378726 RASA4BC9J798 803 aa19.9■□□□□ 0.78
SSU72-204ENST00000378726 RASA4O43374 803 aa19.9■□□□□ 0.78
SSU72-204ENST00000378726 SPAG7O75391 227 aa19.9■□□□□ 0.78
SSU72-204ENST00000378726 SLC2A3P11169 496 aa19.9■□□□□ 0.78
SSU72-204ENST00000378726 GARSP41250 739 aaKnown RBP19.9■□□□□ 0.78
SSU72-204ENST00000378726 TUFMP49411 452 aaKnown RBP19.9■□□□□ 0.78
SSU72-204ENST00000378726 TUBP50607 506 aa19.9■□□□□ 0.78
SSU72-204ENST00000378726 GALNT2Q10471 571 aa19.9■□□□□ 0.78
SSU72-204ENST00000378726 BTG3Q14201 252 aaPredicted RBP19.9■□□□□ 0.78
SSU72-204ENST00000378726 PARP6Q2NL67 630 aa19.9■□□□□ 0.78
SSU72-204ENST00000378726 AGGF1Q8N302 714 aaeCLIP19.9■□□□□ 0.78
SSU72-204ENST00000378726 FBF1Q8TES7 1133 aa19.9■□□□□ 0.78
SSU72-204ENST00000378726 DEPDC1BQ8WUY9 529 aa19.9■□□□□ 0.78
SSU72-204ENST00000378726 C1orf74Q96LT6 269 aa19.9■□□□□ 0.78
SSU72-204ENST00000378726 CLSTN3Q9BQT9 956 aa19.9■□□□□ 0.78
SSU72-204ENST00000378726 PITPNM3Q9BZ71 974 aa19.9■□□□□ 0.78
SSU72-204ENST00000378726 ACTL7BQ9Y614 415 aa19.9■□□□□ 0.78
SSU72-204ENST00000378726 KIAA0100Q14667 2235 aaKnown RBP19.89■□□□□ 0.78
SSU72-204ENST00000378726 SOD2P04179 222 aa19.89■□□□□ 0.77
SSU72-204ENST00000378726 ACRP10323 421 aa19.89■□□□□ 0.77
SSU72-204ENST00000378726 TSHRP16473 764 aa19.89■□□□□ 0.77
SSU72-204ENST00000378726 ATF6P18850 670 aa19.89■□□□□ 0.77
SSU72-204ENST00000378726 HTR7P34969 479 aa19.89■□□□□ 0.77
SSU72-204ENST00000378726 MSH2P43246 934 aa19.89■□□□□ 0.77
SSU72-204ENST00000378726 PKN2Q16513 984 aaKnown RBP19.89■□□□□ 0.77
SSU72-204ENST00000378726 C10orf120Q5SQS8 335 aa19.89■□□□□ 0.77
SSU72-204ENST00000378726 MANEALQ5VSG8 457 aa19.89■□□□□ 0.77
SSU72-204ENST00000378726 NECAB2Q7Z6G3 386 aa19.89■□□□□ 0.77
SSU72-204ENST00000378726 C14orf80Q86SX3 495 aa19.89■□□□□ 0.77
SSU72-204ENST00000378726 RIBC1Q8N443 379 aaPredicted RBP19.89■□□□□ 0.77
SSU72-204ENST00000378726 HDAC11Q96DB2 347 aa19.89■□□□□ 0.77
SSU72-204ENST00000378726 MRRFQ96E11 262 aaKnown RBP19.89■□□□□ 0.77
SSU72-204ENST00000378726 TMEM169Q96HH4 297 aa19.89■□□□□ 0.77
SSU72-204ENST00000378726 CATSPERBQ9H7T0 1116 aa19.89■□□□□ 0.77
SSU72-204ENST00000378726 NEU3Q9UQ49 428 aa19.89■□□□□ 0.77
SSU72-204ENST00000378726 ZNF189O75820 626 aaPredicted RBP19.88■□□□□ 0.77
SSU72-204ENST00000378726 PTPN3P26045 913 aa19.88■□□□□ 0.77
SSU72-204ENST00000378726 GRIA1P42261 906 aa19.88■□□□□ 0.77
SSU72-204ENST00000378726 WDR5P61964 334 aaKnown RBP19.88■□□□□ 0.77
SSU72-204ENST00000378726 SARNPP82979 210 aaKnown RBP19.88■□□□□ 0.77
SSU72-204ENST00000378726 TDRPQ86YL5 185 aa19.88■□□□□ 0.77
SSU72-204ENST00000378726 MIB1Q86YT6 1006 aa19.88■□□□□ 0.77
SSU72-204ENST00000378726 DNAJC5GQ8N7S2 189 aa19.88■□□□□ 0.77
SSU72-204ENST00000378726 PDCD7Q8N8D1 485 aaKnown RBP19.88■□□□□ 0.77
SSU72-204ENST00000378726 OLA1Q9NTK5 396 aaKnown RBP19.88■□□□□ 0.77
SSU72-204ENST00000378726 KLHL8Q9P2G9 620 aaPredicted RBP19.88■□□□□ 0.77
SSU72-204ENST00000378726 FAM47DPA6NHR8 397 aa19.88■□□□□ 0.77
SSU72-204ENST00000378726 E9PAM4 449 aa19.88■□□□□ 0.77
SSU72-204ENST00000378726 KIAA0355O15063 1070 aa19.88■□□□□ 0.77
SSU72-204ENST00000378726 HSPA8P11142 646 aaKnown RBP19.88■□□□□ 0.77
SSU72-204ENST00000378726 CCNB1P14635 433 aa19.88■□□□□ 0.77
SSU72-204ENST00000378726 HOXC13P31276 330 aa19.88■□□□□ 0.77
SSU72-204ENST00000378726 IL9RQ01113 521 aa19.88■□□□□ 0.77
SSU72-204ENST00000378726 ARTNQ5T4W7 220 aa19.88■□□□□ 0.77
SSU72-204ENST00000378726 SLC39A11Q8N1S5 342 aa19.88■□□□□ 0.77
SSU72-204ENST00000378726 SPOCK2Q92563 424 aa19.88■□□□□ 0.77
SSU72-204ENST00000378726 RSRC1Q96IZ7 334 aaKnown RBP19.88■□□□□ 0.77
SSU72-204ENST00000378726 MARCH2Q9P0N8 246 aa19.88■□□□□ 0.77
SSU72-204ENST00000378726 FGF10O15520 208 aaPredicted RBP19.87■□□□□ 0.77
SSU72-204ENST00000378726 CCND1P24385 295 aa19.87■□□□□ 0.77
SSU72-204ENST00000378726 PSMB4P28070 264 aa19.87■□□□□ 0.77
SSU72-204ENST00000378726 GEMIN4P57678 1058 aaKnown RBP19.87■□□□□ 0.77
SSU72-204ENST00000378726 CDK16Q00536 496 aa19.87■□□□□ 0.77
SSU72-204ENST00000378726 PIK3R6Q5UE93 754 aa19.87■□□□□ 0.77
SSU72-204ENST00000378726 ZNF534Q76KX8 674 aa19.87■□□□□ 0.77
SSU72-204ENST00000378726 TMEM199Q8N511 208 aa19.87■□□□□ 0.77
SSU72-204ENST00000378726 ZNF461Q8TAF7 563 aa19.87■□□□□ 0.77
SSU72-204ENST00000378726 ACSS3Q9H6R3 686 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms