RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 DENND1CQ8IV53 801 aa14.48□□□□□ -0.09
SHROOM1-203ENST00000378679 CCDC185Q8N715 623 aa14.48□□□□□ -0.09
SHROOM1-203ENST00000378679 SRPK1Q96SB4 655 aaKnown RBP14.48□□□□□ -0.09
SHROOM1-203ENST00000378679 BCO2Q9BYV7 579 aa14.48□□□□□ -0.09
SHROOM1-203ENST00000378679 DRC3Q9H069 523 aa14.48□□□□□ -0.09
SHROOM1-203ENST00000378679 CYP4F12Q9HCS2 524 aa14.48□□□□□ -0.09
SHROOM1-203ENST00000378679 ADA2Q9NZK5 511 aa14.48□□□□□ -0.09
SHROOM1-203ENST00000378679 DLGAP2Q9P1A6 1054 aa14.48□□□□□ -0.09
SHROOM1-203ENST00000378679 UBA2Q9UBT2 640 aaPredicted RBP14.48□□□□□ -0.09
SHROOM1-203ENST00000378679 MYH10P35580 1976 aa14.48□□□□□ -0.09
SHROOM1-203ENST00000378679 STK25O00506 426 aa14.48□□□□□ -0.09
SHROOM1-203ENST00000378679 GLP2RO95838 553 aa14.48□□□□□ -0.09
SHROOM1-203ENST00000378679 CPA3P15088 417 aa14.48□□□□□ -0.09
SHROOM1-203ENST00000378679 HDAC4P56524 1084 aa14.48□□□□□ -0.09
SHROOM1-203ENST00000378679 SMAD3P84022 425 aaKnown RBP14.48□□□□□ -0.09
SHROOM1-203ENST00000378679 MTA1Q13330 715 aa14.48□□□□□ -0.09
SHROOM1-203ENST00000378679 CUL3Q13618 768 aa14.48□□□□□ -0.09
SHROOM1-203ENST00000378679 BRMS1LQ5PSV4 323 aa14.48□□□□□ -0.09
SHROOM1-203ENST00000378679 OTOP2Q7RTS6 562 aa14.48□□□□□ -0.09
SHROOM1-203ENST00000378679 EFHD1Q9BUP0 239 aa14.48□□□□□ -0.09
SHROOM1-203ENST00000378679 EMILIN2Q9BXX0 1053 aa14.48□□□□□ -0.09
SHROOM1-203ENST00000378679 GPAMQ9HCL2 828 aa14.48□□□□□ -0.09
SHROOM1-203ENST00000378679 CD274Q9NZQ7 290 aa14.48□□□□□ -0.09
SHROOM1-203ENST00000378679 CNTN3Q9P232 1028 aa14.48□□□□□ -0.09
SHROOM1-203ENST00000378679 HEY2Q9UBP5 337 aa14.48□□□□□ -0.09
SHROOM1-203ENST00000378679 SEPT3Q9UH03 358 aa14.48□□□□□ -0.09
SHROOM1-203ENST00000378679 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.48□□□□□ -0.09
SHROOM1-203ENST00000378679 NRAPQ86VF7 1730 aa14.48□□□□□ -0.09
SHROOM1-203ENST00000378679 ADRA1DP25100 572 aa14.48□□□□□ -0.09
SHROOM1-203ENST00000378679 PGM1P36871 562 aa14.48□□□□□ -0.09
SHROOM1-203ENST00000378679 RBBP7Q16576 425 aa14.48□□□□□ -0.09
SHROOM1-203ENST00000378679 PPM1LQ5SGD2 360 aa14.48□□□□□ -0.09
SHROOM1-203ENST00000378679 TPGS1Q6ZTW0 290 aa14.48□□□□□ -0.09
SHROOM1-203ENST00000378679 NLRP9Q7RTR0 991 aa14.48□□□□□ -0.09
SHROOM1-203ENST00000378679 FIBCD1Q8N539 461 aa14.48□□□□□ -0.09
SHROOM1-203ENST00000378679 EMID1Q96A84 441 aaPredicted RBP14.48□□□□□ -0.09
SHROOM1-203ENST00000378679 GMIPQ9P107 970 aa14.48□□□□□ -0.09
SHROOM1-203ENST00000378679 VPS9D1Q9Y2B5 631 aa14.48□□□□□ -0.09
SHROOM1-203ENST00000378679 TM9SF1O15321 606 aa14.47□□□□□ -0.09
SHROOM1-203ENST00000378679 APOA4P06727 396 aa14.47□□□□□ -0.09
SHROOM1-203ENST00000378679 CD151P48509 253 aa14.47□□□□□ -0.09
SHROOM1-203ENST00000378679 SERPINB4P48594 390 aa14.47□□□□□ -0.09
SHROOM1-203ENST00000378679 PRMT2P55345 433 aa14.47□□□□□ -0.09
SHROOM1-203ENST00000378679 TLE2Q04725 743 aa14.47□□□□□ -0.09
SHROOM1-203ENST00000378679 XRCC4Q13426 336 aa14.47□□□□□ -0.09
SHROOM1-203ENST00000378679 CSHL1Q14406 222 aa14.47□□□□□ -0.09
SHROOM1-203ENST00000378679 LRRC23Q53EV4 343 aaPredicted RBP14.47□□□□□ -0.09
SHROOM1-203ENST00000378679 DCAF12L1Q5VU92 463 aa14.47□□□□□ -0.09
SHROOM1-203ENST00000378679 C17orf99Q6UX52 265 aa14.47□□□□□ -0.09
SHROOM1-203ENST00000378679 HS6ST3Q8IZP7 471 aa14.47□□□□□ -0.09
SHROOM1-203ENST00000378679 PDZD8Q8NEN9 1154 aa14.47□□□□□ -0.09
SHROOM1-203ENST00000378679 PBXIP1Q96AQ6 731 aa14.47□□□□□ -0.09
SHROOM1-203ENST00000378679 RMDN2Q96LZ7 410 aa14.47□□□□□ -0.09
SHROOM1-203ENST00000378679 POLR1EQ9GZS1 481 aaKnown RBP14.47□□□□□ -0.09
SHROOM1-203ENST00000378679 ILKAPQ9H0C8 392 aaPredicted RBP14.47□□□□□ -0.09
SHROOM1-203ENST00000378679 PGAP2Q9UHJ9 254 aa14.47□□□□□ -0.09
SHROOM1-203ENST00000378679 TRMT6Q9UJA5 497 aaKnown RBP14.47□□□□□ -0.09
SHROOM1-203ENST00000378679 KIF3CO14782 793 aa14.47□□□□□ -0.09
SHROOM1-203ENST00000378679 SPATA31D3P0C874 917 aa14.47□□□□□ -0.09
SHROOM1-203ENST00000378679 RALBP11234 206 aa14.47□□□□□ -0.09
SHROOM1-203ENST00000378679 KCNE1P15382 129 aa14.47□□□□□ -0.09
SHROOM1-203ENST00000378679 TARSP26639 723 aaKnown RBP14.47□□□□□ -0.09
SHROOM1-203ENST00000378679 CPA2P48052 419 aa14.47□□□□□ -0.09
SHROOM1-203ENST00000378679 MAXP61244 160 aa14.47□□□□□ -0.09
SHROOM1-203ENST00000378679 SKOR1P84550 965 aa14.47□□□□□ -0.09
SHROOM1-203ENST00000378679 TMED1Q13445 227 aa14.47□□□□□ -0.09
SHROOM1-203ENST00000378679 EFTUD2Q15029 972 aaKnown RBP eCLIP14.47□□□□□ -0.092e-7■■■■□ 25.8
SHROOM1-203ENST00000378679 SPATA31D4Q6ZUB0 917 aa14.47□□□□□ -0.09
SHROOM1-203ENST00000378679 TBL1YQ9BQ87 522 aa14.47□□□□□ -0.09
SHROOM1-203ENST00000378679 APOL5Q9BWW9 433 aa14.47□□□□□ -0.09
SHROOM1-203ENST00000378679 PRKD2Q9BZL6 878 aa14.47□□□□□ -0.09
SHROOM1-203ENST00000378679 GPR88Q9GZN0 384 aa14.47□□□□□ -0.09
SHROOM1-203ENST00000378679 HAPLN2Q9GZV7 340 aa14.47□□□□□ -0.09
SHROOM1-203ENST00000378679 A0A096LPK6 155 aa14.47□□□□□ -0.09
SHROOM1-203ENST00000378679 HEATR9A2RTY3 570 aa14.47□□□□□ -0.09
SHROOM1-203ENST00000378679 BUD23O43709 281 aaKnown RBP14.47□□□□□ -0.09
SHROOM1-203ENST00000378679 ZNF865P0CJ78 1059 aaPredicted RBP14.47□□□□□ -0.09
SHROOM1-203ENST00000378679 IL1R2P27930 398 aa14.47□□□□□ -0.09
SHROOM1-203ENST00000378679 HADHAP40939 763 aa14.47□□□□□ -0.09
SHROOM1-203ENST00000378679 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.47□□□□□ -0.09
SHROOM1-203ENST00000378679 SPANXN3Q5MJ09 141 aa14.47□□□□□ -0.09
SHROOM1-203ENST00000378679 N4BP2L1Q5TBK1 243 aaPredicted RBP14.47□□□□□ -0.09
SHROOM1-203ENST00000378679 SCAMP5Q8TAC9 235 aa14.47□□□□□ -0.09
SHROOM1-203ENST00000378679 KCTD15Q96SI1 283 aaPredicted RBP14.47□□□□□ -0.09
SHROOM1-203ENST00000378679 EBNA1BP2Q99848 306 aaKnown RBP14.47□□□□□ -0.09
SHROOM1-203ENST00000378679 CYLDQ9NQC7 956 aa14.47□□□□□ -0.09
SHROOM1-203ENST00000378679 ARHGEF4Q9NR80 690 aa14.47□□□□□ -0.09
SHROOM1-203ENST00000378679 B2RBV5 119 aa14.46□□□□□ -0.09
SHROOM1-203ENST00000378679 ARVCFO00192 962 aa14.46□□□□□ -0.09
SHROOM1-203ENST00000378679 MFSD11O43934 449 aa14.46□□□□□ -0.09
SHROOM1-203ENST00000378679 HMOX2P30519 316 aa14.46□□□□□ -0.09
SHROOM1-203ENST00000378679 PTGIRP43119 386 aa14.46□□□□□ -0.09
SHROOM1-203ENST00000378679 GRAMD1BQ3KR37 738 aa14.46□□□□□ -0.09
SHROOM1-203ENST00000378679 TMEM110Q86TL2 294 aa14.46□□□□□ -0.09
SHROOM1-203ENST00000378679 PCDH19Q8TAB3 1148 aa14.46□□□□□ -0.09
SHROOM1-203ENST00000378679 FGD4Q96M96 766 aa14.46□□□□□ -0.09
SHROOM1-203ENST00000378679 SLC4A5Q9BY07 1137 aa14.46□□□□□ -0.09
SHROOM1-203ENST00000378679 IL22Q9GZX6 179 aa14.46□□□□□ -0.09
SHROOM1-203ENST00000378679 UPF3AQ9H1J1 476 aaKnown RBP14.46□□□□□ -0.09
SHROOM1-203ENST00000378679 TMEM161AQ9NX61 479 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms