RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 CTSOP43234 321 aaPredicted RBP17.32■□□□□ 0.36
HMGN4-201ENST00000377575 PLK1P53350 603 aa17.32■□□□□ 0.36
HMGN4-201ENST00000377575 TRNP1Q6NT89 227 aa17.32■□□□□ 0.36
HMGN4-201ENST00000377575 SLC23A3Q6PIS1 610 aa17.32■□□□□ 0.36
HMGN4-201ENST00000377575 PHF13Q86YI8 300 aaPredicted RBP17.32■□□□□ 0.36
HMGN4-201ENST00000377575 RGL4Q8IZJ4 473 aa17.32■□□□□ 0.36
HMGN4-201ENST00000377575 APCDD1Q8J025 514 aa17.32■□□□□ 0.36
HMGN4-201ENST00000377575 EMC1Q8N766 993 aa17.32■□□□□ 0.36
HMGN4-201ENST00000377575 CADM4Q8NFZ8 388 aa17.32■□□□□ 0.36
HMGN4-201ENST00000377575 C1orf74Q96LT6 269 aa17.32■□□□□ 0.36
HMGN4-201ENST00000377575 PCDHB18PQ96TA0 734 aa17.32■□□□□ 0.36
HMGN4-201ENST00000377575 AGPAT1Q99943 283 aa17.32■□□□□ 0.36
HMGN4-201ENST00000377575 GPR174Q9BXC1 333 aa17.32■□□□□ 0.36
HMGN4-201ENST00000377575 TMEM9BQ9NQ34 198 aa17.32■□□□□ 0.36
HMGN4-201ENST00000377575 TMEM74BQ9NUR3 256 aa17.32■□□□□ 0.36
HMGN4-201ENST00000377575 SLC25A13Q9UJS0 675 aa17.32■□□□□ 0.36
HMGN4-201ENST00000377575 SCML1Q9UN30 329 aa17.32■□□□□ 0.36
HMGN4-201ENST00000377575 PCDH15Q96QU1 1955 aa17.31■□□□□ 0.36
HMGN4-201ENST00000377575 A0A1B0GTH6 734 aa17.31■□□□□ 0.36
HMGN4-201ENST00000377575 A0A1W2PQC6 194 aa17.31■□□□□ 0.36
HMGN4-201ENST00000377575 TARSL2A2RTX5 802 aaKnown RBP17.31■□□□□ 0.36
HMGN4-201ENST00000377575 SIN3BO75182 1162 aa17.31■□□□□ 0.36
HMGN4-201ENST00000377575 SERPINC1P01008 464 aa17.31■□□□□ 0.36
HMGN4-201ENST00000377575 GNSP15586 552 aa17.31■□□□□ 0.36
HMGN4-201ENST00000377575 MZF1P28698 734 aaPredicted RBP17.31■□□□□ 0.36
HMGN4-201ENST00000377575 IRAK1P51617 712 aa17.31■□□□□ 0.36
HMGN4-201ENST00000377575 RPS14P62263 151 aaKnown RBP17.31■□□□□ 0.36
HMGN4-201ENST00000377575 IRX4P78413 519 aa17.31■□□□□ 0.36
HMGN4-201ENST00000377575 ATP11AP98196 1134 aa17.31■□□□□ 0.36
HMGN4-201ENST00000377575 SFSWAPQ12872 951 aaKnown RBP17.31■□□□□ 0.36
HMGN4-201ENST00000377575 IQCB1Q15051 598 aa17.31■□□□□ 0.36
HMGN4-201ENST00000377575 ARL13BQ3SXY8 428 aa17.31■□□□□ 0.36
HMGN4-201ENST00000377575 PPP1R2P3Q6NXS1 205 aa17.31■□□□□ 0.36
HMGN4-201ENST00000377575 LRSAM1Q6UWE0 723 aa17.31■□□□□ 0.36
HMGN4-201ENST00000377575 C14orf80Q86SX3 495 aa17.31■□□□□ 0.36
HMGN4-201ENST00000377575 FAM131BQ86XD5 332 aa17.31■□□□□ 0.36
HMGN4-201ENST00000377575 C3orf20Q8ND61 904 aa17.31■□□□□ 0.36
HMGN4-201ENST00000377575 HAPLN3Q96S86 360 aa17.31■□□□□ 0.36
HMGN4-201ENST00000377575 SELENOOQ9BVL4 669 aa17.31■□□□□ 0.36
HMGN4-201ENST00000377575 MUC3BQ9H195 1237 aa17.31■□□□□ 0.36
HMGN4-201ENST00000377575 PCED1AQ9H1Q7 454 aa17.31■□□□□ 0.36
HMGN4-201ENST00000377575 RSPH9Q9H1X1 276 aaPredicted RBP17.31■□□□□ 0.36
HMGN4-201ENST00000377575 ANLNQ9NQW6 1124 aa17.31■□□□□ 0.36
HMGN4-201ENST00000377575 VPS28Q9UK41 221 aa17.31■□□□□ 0.36
HMGN4-201ENST00000377575 C2CD4BA6NLJ0 364 aa17.3■□□□□ 0.36
HMGN4-201ENST00000377575 E9PAM4 449 aa17.3■□□□□ 0.36
HMGN4-201ENST00000377575 I6L893 689 aaPredicted RBP17.3■□□□□ 0.36
HMGN4-201ENST00000377575 RHOCP08134 193 aa17.3■□□□□ 0.36
HMGN4-201ENST00000377575 SERPINF2P08697 491 aa17.3■□□□□ 0.36
HMGN4-201ENST00000377575 KRT3P12035 628 aa17.3■□□□□ 0.36
HMGN4-201ENST00000377575 PTPN9P43378 593 aa17.3■□□□□ 0.36
HMGN4-201ENST00000377575 PTP4A2Q12974 167 aa17.3■□□□□ 0.36
HMGN4-201ENST00000377575 CDO1Q16878 200 aa17.3■□□□□ 0.36
HMGN4-201ENST00000377575 DAB2IPQ5VWQ8 1189 aa17.3■□□□□ 0.36
HMGN4-201ENST00000377575 MON1BQ7L1V2 547 aa17.3■□□□□ 0.36
HMGN4-201ENST00000377575 STRADAQ7RTN6 431 aa17.3■□□□□ 0.36
HMGN4-201ENST00000377575 PHLDB2Q86SQ0 1253 aa17.3■□□□□ 0.36
HMGN4-201ENST00000377575 SETD3Q86TU7 594 aaPredicted RBP17.3■□□□□ 0.36
HMGN4-201ENST00000377575 FAM124AQ86V42 546 aa17.3■□□□□ 0.36
HMGN4-201ENST00000377575 RXFP2Q8WXD0 754 aa17.3■□□□□ 0.36
HMGN4-201ENST00000377575 BAP1Q92560 729 aa17.3■□□□□ 0.36
HMGN4-201ENST00000377575 RPL10LQ96L21 214 aaKnown RBP17.3■□□□□ 0.36
HMGN4-201ENST00000377575 FEM1AQ9BSK4 669 aa17.3■□□□□ 0.36
HMGN4-201ENST00000377575 SLC6A14Q9UN76 642 aa17.3■□□□□ 0.36
HMGN4-201ENST00000377575 TBC1D30Q9Y2I9 924 aa17.3■□□□□ 0.36
HMGN4-201ENST00000377575 NUMA1Q14980 2115 aa17.29■□□□□ 0.36
HMGN4-201ENST00000377575 CACNA1EQ15878 2313 aa17.29■□□□□ 0.36
HMGN4-201ENST00000377575 IGLV3-10A0A075B6K4 115 aa17.29■□□□□ 0.36
HMGN4-201ENST00000377575 ANKRD62A6NC57 917 aa17.29■□□□□ 0.36
HMGN4-201ENST00000377575 LRRC53A6NM62 1247 aa17.29■□□□□ 0.36
HMGN4-201ENST00000377575 C4orf47A7E2U8 309 aa17.29■□□□□ 0.36
HMGN4-201ENST00000377575 TTC34A8MYJ7 566 aa17.29■□□□□ 0.36
HMGN4-201ENST00000377575 ENDOD1O94919 500 aa17.29■□□□□ 0.36
HMGN4-201ENST00000377575 ENGP17813 658 aa17.29■□□□□ 0.36
HMGN4-201ENST00000377575 STK19P49842 368 aaPredicted RBP17.29■□□□□ 0.36
HMGN4-201ENST00000377575 VASPP50552 380 aaPredicted RBP17.29■□□□□ 0.36
HMGN4-201ENST00000377575 ATXN3P54252 364 aaPredicted RBP17.29■□□□□ 0.36
HMGN4-201ENST00000377575 KRT83P78385 493 aa17.29■□□□□ 0.36
HMGN4-201ENST00000377575 GFPT1Q06210 699 aaPredicted RBP17.29■□□□□ 0.36
HMGN4-201ENST00000377575 ASIC2Q16515 512 aa17.29■□□□□ 0.36
HMGN4-201ENST00000377575 C15orf59Q2T9L4 293 aaPredicted RBP17.29■□□□□ 0.36
HMGN4-201ENST00000377575 CCDC14Q49A88 953 aa17.29■□□□□ 0.36
HMGN4-201ENST00000377575 C6orf118Q5T5N4 469 aa17.29■□□□□ 0.36
HMGN4-201ENST00000377575 C9orf64Q5T6V5 341 aa17.29■□□□□ 0.36
HMGN4-201ENST00000377575 DCAF12L1Q5VU92 463 aa17.29■□□□□ 0.36
HMGN4-201ENST00000377575 DNAJC24Q6P3W2 148 aa17.29■□□□□ 0.36
HMGN4-201ENST00000377575 USP30Q70CQ3 517 aa17.29■□□□□ 0.36
HMGN4-201ENST00000377575 ZNF683Q8IZ20 524 aa17.29■□□□□ 0.36
HMGN4-201ENST00000377575 JOSD2Q8TAC2 188 aa17.29■□□□□ 0.36
HMGN4-201ENST00000377575 BTBD1Q9H0C5 482 aa17.29■□□□□ 0.36
HMGN4-201ENST00000377575 PABPC3Q9H361 631 aaKnown RBP17.29■□□□□ 0.36
HMGN4-201ENST00000377575 MTG2Q9H4K7 406 aa17.29■□□□□ 0.36
HMGN4-201ENST00000377575 CBX8Q9HC52 389 aa17.29■□□□□ 0.36
HMGN4-201ENST00000377575 SLCO3A1Q9UIG8 710 aa17.29■□□□□ 0.36
HMGN4-201ENST00000377575 NCKAP1Q9Y2A7 1128 aa17.29■□□□□ 0.36
HMGN4-201ENST00000377575 SNX10Q9Y5X0 201 aa17.29■□□□□ 0.36
HMGN4-201ENST00000377575 DRGXA6NNA5 263 aa17.28■□□□□ 0.36
HMGN4-201ENST00000377575 GOLGA6L19H0YKK7 550 aa17.28■□□□□ 0.36
HMGN4-201ENST00000377575 CNTN5O94779 1100 aa17.28■□□□□ 0.36
HMGN4-201ENST00000377575 SEMA4FO95754 770 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms