RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 ISL2Q96A47 359 aa13.52□□□□□ -0.24
ACTN1-202ENST00000376839 CPSF2Q9P2I0 782 aaKnown RBP13.52□□□□□ -0.24
ACTN1-202ENST00000376839 RCOR3Q9P2K3 495 aaPredicted RBP13.52□□□□□ -0.24
ACTN1-202ENST00000376839 ARHGAP26Q9UNA1 814 aa13.52□□□□□ -0.24
ACTN1-202ENST00000376839 TBC1D30Q9Y2I9 924 aa13.52□□□□□ -0.24
ACTN1-202ENST00000376839 CDY2AQ9Y6F7 541 aa13.52□□□□□ -0.24
ACTN1-202ENST00000376839 CDY1Q9Y6F8 540 aa13.52□□□□□ -0.24
ACTN1-202ENST00000376839 ADM5C9JUS6 153 aa13.52□□□□□ -0.25
ACTN1-202ENST00000376839 CHRNGP07510 517 aa13.52□□□□□ -0.25
ACTN1-202ENST00000376839 GNL1P36915 607 aaPredicted RBP13.52□□□□□ -0.25
ACTN1-202ENST00000376839 CCR10P46092 362 aa13.52□□□□□ -0.25
ACTN1-202ENST00000376839 HSP90AA5PQ58FG0 334 aa13.52□□□□□ -0.25
ACTN1-202ENST00000376839 PPM1LQ5SGD2 360 aa13.52□□□□□ -0.25
ACTN1-202ENST00000376839 MARCH8Q5T0T0 291 aa13.52□□□□□ -0.25
ACTN1-202ENST00000376839 KBTBD6Q86V97 674 aa13.52□□□□□ -0.25
ACTN1-202ENST00000376839 PIGZQ86VD9 579 aa13.52□□□□□ -0.25
ACTN1-202ENST00000376839 LRRC52Q8N7C0 313 aa13.52□□□□□ -0.25
ACTN1-202ENST00000376839 TDRD5Q8NAT2 981 aaKnown RBP13.52□□□□□ -0.25
ACTN1-202ENST00000376839 PPP1R13LQ8WUF5 828 aa13.52□□□□□ -0.25
ACTN1-202ENST00000376839 MFSD3Q96ES6 412 aa13.52□□□□□ -0.25
ACTN1-202ENST00000376839 C16orf70Q9BSU1 422 aa13.52□□□□□ -0.25
ACTN1-202ENST00000376839 ZCWPW1Q9H0M4 648 aa13.52□□□□□ -0.25
ACTN1-202ENST00000376839 NXF3Q9H4D5 531 aaKnown RBP13.52□□□□□ -0.25
ACTN1-202ENST00000376839 WDR55Q9H6Y2 383 aaPredicted RBP13.52□□□□□ -0.25
ACTN1-202ENST00000376839 KLHL8Q9P2G9 620 aaPredicted RBP13.52□□□□□ -0.25
ACTN1-202ENST00000376839 IGSF9Q9P2J2 1179 aa13.52□□□□□ -0.25
ACTN1-202ENST00000376839 ZCWPW2A0A1B0GU75 182 aa13.51□□□□□ -0.25
ACTN1-202ENST00000376839 FAM72CH0Y354 149 aa13.51□□□□□ -0.25
ACTN1-202ENST00000376839 ETS2P15036 469 aa13.51□□□□□ -0.25
ACTN1-202ENST00000376839 AKAP5P24588 427 aa13.51□□□□□ -0.25
ACTN1-202ENST00000376839 MPSTP25325 297 aa13.51□□□□□ -0.25
ACTN1-202ENST00000376839 SPRP35270 261 aaPredicted RBP13.51□□□□□ -0.25
ACTN1-202ENST00000376839 SERPINB5P36952 375 aa13.51□□□□□ -0.25
ACTN1-202ENST00000376839 NME3Q13232 169 aa13.51□□□□□ -0.25
ACTN1-202ENST00000376839 GRAMD1BQ3KR37 738 aa13.51□□□□□ -0.25
ACTN1-202ENST00000376839 FAM72AQ5TYM5 149 aa13.51□□□□□ -0.25
ACTN1-202ENST00000376839 FAM72DQ6L9T8 149 aa13.51□□□□□ -0.25
ACTN1-202ENST00000376839 MAMDC4Q6UXC1 1216 aa13.51□□□□□ -0.25
ACTN1-202ENST00000376839 MOB2Q70IA6 237 aa13.51□□□□□ -0.25
ACTN1-202ENST00000376839 FAM72BQ86X60 149 aa13.51□□□□□ -0.25
ACTN1-202ENST00000376839 ST13P4Q8IZP2 240 aaPredicted RBP13.51□□□□□ -0.25
ACTN1-202ENST00000376839 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.51□□□□□ -0.25
ACTN1-202ENST00000376839 RNF169Q8NCN4 708 aa13.51□□□□□ -0.25
ACTN1-202ENST00000376839 BEST2Q8NFU1 509 aa13.51□□□□□ -0.25
ACTN1-202ENST00000376839 SLC16A10Q8TF71 515 aa13.51□□□□□ -0.25
ACTN1-202ENST00000376839 G3BP2Q9UN86 482 aaKnown RBP13.51□□□□□ -0.25
ACTN1-202ENST00000376839 SSX2IPQ9Y2D8 614 aa13.51□□□□□ -0.25
ACTN1-202ENST00000376839 GOLGA8TH3BQL2 631 aa13.51□□□□□ -0.25
ACTN1-202ENST00000376839 NEMP1O14524 444 aa13.51□□□□□ -0.25
ACTN1-202ENST00000376839 TXNDC9O14530 226 aa13.51□□□□□ -0.25
ACTN1-202ENST00000376839 AMHP03971 560 aa13.51□□□□□ -0.25
ACTN1-202ENST00000376839 PTPN3P26045 913 aa13.51□□□□□ -0.25
ACTN1-202ENST00000376839 NDUFV1P49821 464 aa13.51□□□□□ -0.25
ACTN1-202ENST00000376839 ITGA7Q13683 1181 aa13.51□□□□□ -0.25
ACTN1-202ENST00000376839 LAMC2Q13753 1193 aa13.51□□□□□ -0.25
ACTN1-202ENST00000376839 DPYSQ14117 519 aa13.51□□□□□ -0.25
ACTN1-202ENST00000376839 DCAF4L1Q3SXM0 396 aa13.51□□□□□ -0.25
ACTN1-202ENST00000376839 MMEL1Q495T6 779 aa13.51□□□□□ -0.25
ACTN1-202ENST00000376839 FSCBQ5H9T9 825 aa13.51□□□□□ -0.25
ACTN1-202ENST00000376839 CERCAMQ5T4B2 595 aa13.51□□□□□ -0.25
ACTN1-202ENST00000376839 SYPL2Q5VXT5 272 aa13.51□□□□□ -0.25
ACTN1-202ENST00000376839 TAPT1Q6NXT6 567 aa13.51□□□□□ -0.25
ACTN1-202ENST00000376839 CLEC14AQ86T13 490 aa13.51□□□□□ -0.25
ACTN1-202ENST00000376839 CRYBG2Q8N1P7 616 aa13.51□□□□□ -0.25
ACTN1-202ENST00000376839 APOL2Q9BQE5 337 aa13.51□□□□□ -0.25
ACTN1-202ENST00000376839 GATA5Q9BWX5 397 aaPredicted RBP13.51□□□□□ -0.25
ACTN1-202ENST00000376839 VCX3BQ9H321 246 aa13.51□□□□□ -0.25
ACTN1-202ENST00000376839 LRRC40Q9H9A6 602 aa13.51□□□□□ -0.25
ACTN1-202ENST00000376839 PLEKHA5Q9HAU0 1116 aa13.51□□□□□ -0.25
ACTN1-202ENST00000376839 ADAM28Q9UKQ2 775 aa13.51□□□□□ -0.25
ACTN1-202ENST00000376839 VANGL2Q9ULK5 521 aa13.51□□□□□ -0.25
ACTN1-202ENST00000376839 BPTFQ12830 3046 aa13.51□□□□□ -0.25
ACTN1-202ENST00000376839 A0A1B0GVG6 124 aa13.5□□□□□ -0.25
ACTN1-202ENST00000376839 CAPN8A6NHC0 703 aa13.5□□□□□ -0.25
ACTN1-202ENST00000376839 M0QYT0 321 aa13.5□□□□□ -0.25
ACTN1-202ENST00000376839 CLDN5O00501 218 aa13.5□□□□□ -0.25
ACTN1-202ENST00000376839 AIM2O14862 343 aa13.5□□□□□ -0.25
ACTN1-202ENST00000376839 BEST1O76090 585 aa13.5□□□□□ -0.25
ACTN1-202ENST00000376839 RECQL4O94761 1208 aa13.5□□□□□ -0.25
ACTN1-202ENST00000376839 C2P06681 752 aa13.5□□□□□ -0.25
ACTN1-202ENST00000376839 GLDCP23378 1020 aa13.5□□□□□ -0.25
ACTN1-202ENST00000376839 ACADSBP45954 432 aa13.5□□□□□ -0.25
ACTN1-202ENST00000376839 PAFAH1B3Q15102 231 aaKnown RBP13.5□□□□□ -0.25
ACTN1-202ENST00000376839 ANKRD20A4Q4UJ75 823 aa13.5□□□□□ -0.25
ACTN1-202ENST00000376839 FBXO47Q5MNV8 452 aa13.5□□□□□ -0.25
ACTN1-202ENST00000376839 HFE2Q6ZVN8 426 aa13.5□□□□□ -0.25
ACTN1-202ENST00000376839 HSFY1Q96LI6 401 aa13.5□□□□□ -0.25
ACTN1-202ENST00000376839 CENPKQ9BS16 269 aa13.5□□□□□ -0.25
ACTN1-202ENST00000376839 RTKNQ9BST9 563 aa13.5□□□□□ -0.25
ACTN1-202ENST00000376839 CCDC28BQ9BUN5 200 aa13.5□□□□□ -0.25
ACTN1-202ENST00000376839 CDHR5Q9HBB8 845 aa13.5□□□□□ -0.25
ACTN1-202ENST00000376839 GOLGA2P5Q9HBQ8 144 aa13.5□□□□□ -0.25
ACTN1-202ENST00000376839 TCF7L2Q9NQB0 619 aa13.5□□□□□ -0.25
ACTN1-202ENST00000376839 PIGVQ9NUD9 493 aa13.5□□□□□ -0.25
ACTN1-202ENST00000376839 INPP5FQ9Y2H2 1132 aa13.5□□□□□ -0.25
ACTN1-202ENST00000376839 DERAQ9Y315 318 aa13.5□□□□□ -0.25
ACTN1-202ENST00000376839 LTBP3Q9NS15 1303 aa13.5□□□□□ -0.25
ACTN1-202ENST00000376839 CASQ2O14958 399 aaPredicted RBP13.5□□□□□ -0.25
ACTN1-202ENST00000376839 DCLK1O15075 740 aa13.5□□□□□ -0.25
ACTN1-202ENST00000376839 ATP9BO43861 1147 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms