RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 HTR3CQ8WXA8 447 aa16.87■□□□□ 0.29
TRIM39-201ENST00000376656 TBCBQ99426 244 aa16.87■□□□□ 0.29
TRIM39-201ENST00000376656 MATN2O00339 956 aa16.86■□□□□ 0.29
TRIM39-201ENST00000376656 DPYSL4O14531 572 aa16.86■□□□□ 0.29
TRIM39-201ENST00000376656 ACOT8O14734 319 aa16.86■□□□□ 0.29
TRIM39-201ENST00000376656 GARSP41250 739 aaKnown RBP16.86■□□□□ 0.29
TRIM39-201ENST00000376656 MAGEA8P43361 318 aa16.86■□□□□ 0.29
TRIM39-201ENST00000376656 NDST1P52848 882 aa16.86■□□□□ 0.29
TRIM39-201ENST00000376656 IL23RQ5VWK5 629 aa16.86■□□□□ 0.29
TRIM39-201ENST00000376656 PMF1Q6P1K2 205 aa16.86■□□□□ 0.29
TRIM39-201ENST00000376656 PTAR1Q7Z6K3 402 aaPredicted RBP16.86■□□□□ 0.29
TRIM39-201ENST00000376656 ZNF554Q86TJ5 538 aa16.86■□□□□ 0.29
TRIM39-201ENST00000376656 SCUBE3Q8IX30 993 aa16.86■□□□□ 0.29
TRIM39-201ENST00000376656 HACE1Q8IYU2 909 aa16.86■□□□□ 0.29
TRIM39-201ENST00000376656 REPS2Q8NFH8 660 aa16.86■□□□□ 0.29
TRIM39-201ENST00000376656 MAML3Q96JK9 1138 aa16.86■□□□□ 0.29
TRIM39-201ENST00000376656 FCRL3Q96P31 734 aaPredicted RBP16.86■□□□□ 0.29
TRIM39-201ENST00000376656 NUF2Q9BZD4 464 aa16.86■□□□□ 0.29
TRIM39-201ENST00000376656 EPS15L1Q9UBC2 864 aa16.86■□□□□ 0.29
TRIM39-201ENST00000376656 A0A0A0MRY4 1105 aa16.86■□□□□ 0.29
TRIM39-201ENST00000376656 TMEM114B3SHH9 223 aa16.86■□□□□ 0.29
TRIM39-201ENST00000376656 TRIM13O60858 407 aa16.86■□□□□ 0.29
TRIM39-201ENST00000376656 ZNF23P17027 643 aa16.86■□□□□ 0.29
TRIM39-201ENST00000376656 NAB1Q13506 487 aa16.86■□□□□ 0.29
TRIM39-201ENST00000376656 ADRM1Q16186 407 aa16.86■□□□□ 0.29
TRIM39-201ENST00000376656 TMEM132AQ24JP5 1023 aa16.86■□□□□ 0.29
TRIM39-201ENST00000376656 STYK1Q6J9G0 422 aa16.86■□□□□ 0.29
TRIM39-201ENST00000376656 ERI1Q8IV48 349 aaKnown RBP16.86■□□□□ 0.29
TRIM39-201ENST00000376656 ATP6V1E2Q96A05 226 aa16.86■□□□□ 0.29
TRIM39-201ENST00000376656 EME1Q96AY2 570 aa16.86■□□□□ 0.29
TRIM39-201ENST00000376656 CERS2Q96G23 380 aa16.86■□□□□ 0.29
TRIM39-201ENST00000376656 GJD4Q96KN9 370 aaPredicted RBP16.86■□□□□ 0.29
TRIM39-201ENST00000376656 SPATA13Q96N96 652 aa16.86■□□□□ 0.29
TRIM39-201ENST00000376656 VPS33BQ9H267 617 aa16.86■□□□□ 0.29
TRIM39-201ENST00000376656 NRBP2Q9NSY0 501 aa16.86■□□□□ 0.29
TRIM39-201ENST00000376656 HESX1Q9UBX0 185 aa16.86■□□□□ 0.29
TRIM39-201ENST00000376656 BCAP29Q9UHQ4 241 aa16.86■□□□□ 0.29
TRIM39-201ENST00000376656 TDRKHQ9Y2W6 561 aaKnown RBP16.86■□□□□ 0.29
TRIM39-201ENST00000376656 GJB1P08034 283 aa16.86■□□□□ 0.29
TRIM39-201ENST00000376656 PROZP22891 400 aa16.86■□□□□ 0.29
TRIM39-201ENST00000376656 MAGEA12P43365 314 aa16.86■□□□□ 0.29
TRIM39-201ENST00000376656 ATF7IP2Q5U623 682 aa16.86■□□□□ 0.29
TRIM39-201ENST00000376656 LPCAT2Q7L5N7 544 aa16.86■□□□□ 0.29
TRIM39-201ENST00000376656 DLG3Q92796 817 aa16.86■□□□□ 0.29
TRIM39-201ENST00000376656 TMA16Q96EY4 203 aaKnown RBP16.86■□□□□ 0.29
TRIM39-201ENST00000376656 AGAP3Q96P47 875 aa16.86■□□□□ 0.29
TRIM39-201ENST00000376656 ILKAPQ9H0C8 392 aaPredicted RBP16.86■□□□□ 0.29
TRIM39-201ENST00000376656 COQ10BQ9H8M1 238 aa16.86■□□□□ 0.29
TRIM39-201ENST00000376656 A0A096LPK6 155 aa16.85■□□□□ 0.29
TRIM39-201ENST00000376656 IGKV6D-21A0A0A0MT36 114 aa16.85■□□□□ 0.29
TRIM39-201ENST00000376656 STT3AP46977 705 aa16.85■□□□□ 0.29
TRIM39-201ENST00000376656 CDK9P50750 372 aaKnown RBP16.85■□□□□ 0.29
TRIM39-201ENST00000376656 ITGA7Q13683 1181 aa16.85■□□□□ 0.29
TRIM39-201ENST00000376656 GRTP1Q5TC63 336 aa16.85■□□□□ 0.29
TRIM39-201ENST00000376656 NCBP2-AS2Q69YL0 99 aa16.85■□□□□ 0.29
TRIM39-201ENST00000376656 ZBTB8OSQ8IWT0 167 aa16.85■□□□□ 0.29
TRIM39-201ENST00000376656 FNDC8Q8TC99 324 aa16.85■□□□□ 0.29
TRIM39-201ENST00000376656 NPAS2Q99743 824 aa16.85■□□□□ 0.29
TRIM39-201ENST00000376656 B3GNT5Q9BYG0 378 aa16.85■□□□□ 0.29
TRIM39-201ENST00000376656 RPF1Q9H9Y2 349 aaKnown RBP16.85■□□□□ 0.29
TRIM39-201ENST00000376656 PTPRHQ9HD43 1115 aa16.85■□□□□ 0.29
TRIM39-201ENST00000376656 ZNF214Q9UL59 606 aaPredicted RBP16.85■□□□□ 0.29
TRIM39-201ENST00000376656 JUNP05412 331 aaKnown RBP16.85■□□□□ 0.29
TRIM39-201ENST00000376656 PPARGP37231 505 aaPredicted RBP16.85■□□□□ 0.29
TRIM39-201ENST00000376656 ART3Q13508 389 aa16.85■□□□□ 0.29
TRIM39-201ENST00000376656 GOLGA7BQ2TAP0 167 aa16.85■□□□□ 0.29
TRIM39-201ENST00000376656 JADE1Q6IE81 842 aa16.85■□□□□ 0.29
TRIM39-201ENST00000376656 FSTL4Q6MZW2 842 aa16.85■□□□□ 0.29
TRIM39-201ENST00000376656 POTEHQ6S545 545 aa16.85■□□□□ 0.29
TRIM39-201ENST00000376656 STRA8Q7Z7C7 330 aa16.85■□□□□ 0.29
TRIM39-201ENST00000376656 CSPG4P5Q96PW8 444 aa16.85■□□□□ 0.29
TRIM39-201ENST00000376656 KCTD15Q96SI1 283 aaPredicted RBP16.85■□□□□ 0.29
TRIM39-201ENST00000376656 AGAP2Q99490 1192 aa16.85■□□□□ 0.29
TRIM39-201ENST00000376656 RBBP8Q99708 897 aa16.85■□□□□ 0.29
TRIM39-201ENST00000376656 CPNE1Q99829 537 aa16.85■□□□□ 0.29
TRIM39-201ENST00000376656 HAUS8Q9BT25 410 aa16.85■□□□□ 0.29
TRIM39-201ENST00000376656 ZNF385DQ9H6B1 395 aa16.85■□□□□ 0.29
TRIM39-201ENST00000376656 CAAP1Q9H8G2 361 aa16.85■□□□□ 0.29
TRIM39-201ENST00000376656 PRDM16Q9HAZ2 1276 aa16.85■□□□□ 0.29
TRIM39-201ENST00000376656 LACTBL1A8MY62 500 aa16.85■□□□□ 0.29
TRIM39-201ENST00000376656 HDAC3O15379 428 aa16.85■□□□□ 0.29
TRIM39-201ENST00000376656 GRID2O43424 1007 aa16.85■□□□□ 0.29
TRIM39-201ENST00000376656 CSPG5O95196 566 aa16.85■□□□□ 0.29
TRIM39-201ENST00000376656 FGFR3P22607 806 aa16.85■□□□□ 0.29
TRIM39-201ENST00000376656 ALDH3B2P48448 385 aa16.85■□□□□ 0.29
TRIM39-201ENST00000376656 SEL1L3Q68CR1 1132 aa16.85■□□□□ 0.29
TRIM39-201ENST00000376656 NXNQ6DKJ4 435 aa16.85■□□□□ 0.29
TRIM39-201ENST00000376656 LCLAT1Q6UWP7 414 aa16.85■□□□□ 0.29
TRIM39-201ENST00000376656 ACVR1CQ8NER5 493 aa16.85■□□□□ 0.29
TRIM39-201ENST00000376656 CXorf38Q8TB03 319 aa16.85■□□□□ 0.29
TRIM39-201ENST00000376656 PARP14Q460N5 1801 aa16.84■□□□□ 0.29
TRIM39-201ENST00000376656 ARHGEF37A1IGU5 675 aa16.84■□□□□ 0.29
TRIM39-201ENST00000376656 KPNA7A9QM74 516 aa16.84■□□□□ 0.29
TRIM39-201ENST00000376656 COQ9O75208 318 aa16.84■□□□□ 0.29
TRIM39-201ENST00000376656 FAM163BP0C2L3 166 aa16.84■□□□□ 0.29
TRIM39-201ENST00000376656 PSMB4P28070 264 aa16.84■□□□□ 0.29
TRIM39-201ENST00000376656 NR2C2P49116 596 aa16.84■□□□□ 0.29
TRIM39-201ENST00000376656 STAT5BP51692 787 aa16.84■□□□□ 0.29
TRIM39-201ENST00000376656 TMEM132BQ14DG7 1078 aa16.84■□□□□ 0.29
TRIM39-201ENST00000376656 DPYSL2Q16555 572 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms