RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 CLCN4P51793 760 aa11.4□□□□□ -0.59
PDPN-202ENST00000376057 SLC7A9P82251 487 aa11.4□□□□□ -0.59
PDPN-202ENST00000376057 SKOR1P84550 965 aa11.4□□□□□ -0.59
PDPN-202ENST00000376057 IFFO1Q0D2I5 559 aa11.4□□□□□ -0.59
PDPN-202ENST00000376057 PDIA2Q13087 525 aaKnown RBP11.4□□□□□ -0.59
PDPN-202ENST00000376057 KYNUQ16719 465 aa11.4□□□□□ -0.59
PDPN-202ENST00000376057 ANO4Q32M45 955 aa11.4□□□□□ -0.59
PDPN-202ENST00000376057 RWDD4Q6NW29 188 aaKnown RBP11.4□□□□□ -0.59
PDPN-202ENST00000376057 ZNF783Q6ZMS7 281 aa11.4□□□□□ -0.59
PDPN-202ENST00000376057 CAND1Q86VP6 1230 aaKnown RBP11.4□□□□□ -0.59
PDPN-202ENST00000376057 CCDC25Q86WR0 208 aa11.4□□□□□ -0.59
PDPN-202ENST00000376057 CCDC117Q8IWD4 279 aaPredicted RBP11.4□□□□□ -0.59
PDPN-202ENST00000376057 KIAA1958Q8N8K9 716 aa11.4□□□□□ -0.59
PDPN-202ENST00000376057 ATP11CQ8NB49 1132 aa11.4□□□□□ -0.59
PDPN-202ENST00000376057 CCNYQ8ND76 341 aa11.4□□□□□ -0.59
PDPN-202ENST00000376057 NOL6Q9H6R4 1146 aaKnown RBP11.4□□□□□ -0.59
PDPN-202ENST00000376057 LRRC4CQ9HCJ2 640 aa11.4□□□□□ -0.59
PDPN-202ENST00000376057 TLR9Q9NR96 1032 aa11.4□□□□□ -0.59
PDPN-202ENST00000376057 EURLQ9NYK6 297 aa11.4□□□□□ -0.59
PDPN-202ENST00000376057 SLC24A2Q9UI40 661 aa11.4□□□□□ -0.59
PDPN-202ENST00000376057 NUDT5Q9UKK9 219 aa11.4□□□□□ -0.59
PDPN-202ENST00000376057 NYNRINQ9P2P1 1898 aaKnown RBP11.4□□□□□ -0.59
PDPN-202ENST00000376057 GOLGA6CA6NDK9 693 aa11.39□□□□□ -0.59
PDPN-202ENST00000376057 STC2O76061 302 aa11.39□□□□□ -0.59
PDPN-202ENST00000376057 HNRNPA1P09651 372 aaKnown RBP eCLIP11.39□□□□□ -0.59
PDPN-202ENST00000376057 GOLGA6DP0CG33 693 aa11.39□□□□□ -0.59
PDPN-202ENST00000376057 CDC25CP30307 473 aa11.39□□□□□ -0.59
PDPN-202ENST00000376057 TAF12Q16514 161 aa11.39□□□□□ -0.59
PDPN-202ENST00000376057 FAM133BQ5BKY9 247 aaKnown RBP11.39□□□□□ -0.59
PDPN-202ENST00000376057 ZNF534Q76KX8 674 aa11.39□□□□□ -0.59
PDPN-202ENST00000376057 TEX26Q8N6G2 289 aa11.39□□□□□ -0.59
PDPN-202ENST00000376057 ARL8AQ96BM9 186 aa11.39□□□□□ -0.59
PDPN-202ENST00000376057 ZFRQ96KR1 1074 aaKnown RBP11.39□□□□□ -0.59
PDPN-202ENST00000376057 ZNF599Q96NL3 588 aa11.39□□□□□ -0.59
PDPN-202ENST00000376057 TCF25Q9BQ70 676 aa11.39□□□□□ -0.59
PDPN-202ENST00000376057 SLC39A8Q9C0K1 460 aa11.39□□□□□ -0.59
PDPN-202ENST00000376057 GOLGA6AQ9NYA3 693 aa11.39□□□□□ -0.59
PDPN-202ENST00000376057 PCDHA11Q9Y5I1 949 aa11.39□□□□□ -0.59
PDPN-202ENST00000376057 ARHGAP42A6NI28 874 aa11.39□□□□□ -0.59
PDPN-202ENST00000376057 SHBGP04278 402 aa11.39□□□□□ -0.59
PDPN-202ENST00000376057 ATP5DP30049 168 aa11.39□□□□□ -0.59
PDPN-202ENST00000376057 CTNNB1P35222 781 aa11.39□□□□□ -0.59
PDPN-202ENST00000376057 CDH4P55283 916 aa11.39□□□□□ -0.59
PDPN-202ENST00000376057 SLC14A2Q15849 920 aa11.39□□□□□ -0.59
PDPN-202ENST00000376057 KCTD19Q17RG1 926 aaPredicted RBP11.39□□□□□ -0.59
PDPN-202ENST00000376057 RABGAP1LQ5R372 815 aa11.39□□□□□ -0.59
PDPN-202ENST00000376057 KDM7AQ6ZMT4 941 aa11.39□□□□□ -0.59
PDPN-202ENST00000376057 TMC7Q7Z402 723 aa11.39□□□□□ -0.59
PDPN-202ENST00000376057 MIB1Q86YT6 1006 aa11.39□□□□□ -0.59
PDPN-202ENST00000376057 ELMOD1Q8N336 334 aa11.39□□□□□ -0.59
PDPN-202ENST00000376057 ATPAF2Q8N5M1 289 aa11.39□□□□□ -0.59
PDPN-202ENST00000376057 KREMEN2Q8NCW0 462 aa11.39□□□□□ -0.59
PDPN-202ENST00000376057 AUTS2Q8WXX7 1259 aa11.39□□□□□ -0.59
PDPN-202ENST00000376057 FCRL5Q96RD9 977 aa11.39□□□□□ -0.59
PDPN-202ENST00000376057 NAT9Q9BTE0 207 aa11.39□□□□□ -0.59
PDPN-202ENST00000376057 DPP7Q9UHL4 492 aa11.39□□□□□ -0.59
PDPN-202ENST00000376057 HELZP42694 1942 aaKnown RBP11.39□□□□□ -0.59
PDPN-202ENST00000376057 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.38□□□□□ -0.59
PDPN-202ENST00000376057 F5H5T6 163 aa11.38□□□□□ -0.59
PDPN-202ENST00000376057 RASGRF2O14827 1237 aa11.38□□□□□ -0.59
PDPN-202ENST00000376057 FAM155BO75949 473 aa11.38□□□□□ -0.59
PDPN-202ENST00000376057 AP2A1O95782 977 aa11.38□□□□□ -0.59
PDPN-202ENST00000376057 GLUD1P00367 558 aa11.38□□□□□ -0.59
PDPN-202ENST00000376057 ERVFC1P60507 584 aa11.38□□□□□ -0.59
PDPN-202ENST00000376057 ERVK-21P61565 698 aa11.38□□□□□ -0.59
PDPN-202ENST00000376057 NR1H3Q13133 447 aa11.38□□□□□ -0.59
PDPN-202ENST00000376057 HNRNPDQ14103 355 aaKnown RBP11.38□□□□□ -0.59
PDPN-202ENST00000376057 MSS51Q4VC12 460 aa11.38□□□□□ -0.59
PDPN-202ENST00000376057 ADGRF1Q5T601 910 aa11.38□□□□□ -0.59
PDPN-202ENST00000376057 RNF43Q68DV7 783 aa11.38□□□□□ -0.59
PDPN-202ENST00000376057 Q6ZNB5 142 aa11.38□□□□□ -0.59
PDPN-202ENST00000376057 PYROXD1Q8WU10 500 aa11.38□□□□□ -0.59
PDPN-202ENST00000376057 SLC22A17Q8WUG5 538 aa11.38□□□□□ -0.59
PDPN-202ENST00000376057 GORASP1Q9BQQ3 440 aa11.38□□□□□ -0.59
PDPN-202ENST00000376057 WDR83Q9BRX9 315 aaKnown RBP11.38□□□□□ -0.59
PDPN-202ENST00000376057 DHRS4Q9BTZ2 278 aa11.38□□□□□ -0.59
PDPN-202ENST00000376057 MAGEH1Q9H213 219 aa11.38□□□□□ -0.59
PDPN-202ENST00000376057 ZNF334Q9HCZ1 680 aaPredicted RBP11.38□□□□□ -0.59
PDPN-202ENST00000376057 ACTL7BQ9Y614 415 aa11.38□□□□□ -0.59
PDPN-202ENST00000376057 LCHNA4D1U4 455 aa11.38□□□□□ -0.59
PDPN-202ENST00000376057 GREM1O60565 184 aa11.38□□□□□ -0.59
PDPN-202ENST00000376057 PEX11BO96011 259 aa11.38□□□□□ -0.59
PDPN-202ENST00000376057 LRG1P02750 347 aa11.38□□□□□ -0.59
PDPN-202ENST00000376057 CCNB1P14635 433 aa11.38□□□□□ -0.59
PDPN-202ENST00000376057 TCF3P15923 654 aa11.38□□□□□ -0.59
PDPN-202ENST00000376057 NRLP54845 237 aa11.38□□□□□ -0.59
PDPN-202ENST00000376057 GPX6P59796 221 aa11.38□□□□□ -0.59
PDPN-202ENST00000376057 IL10RBQ08334 325 aa11.38□□□□□ -0.59
PDPN-202ENST00000376057 KRT71Q3SY84 523 aa11.38□□□□□ -0.59
PDPN-202ENST00000376057 STEAP4Q687X5 459 aa11.38□□□□□ -0.59
PDPN-202ENST00000376057 SETD3Q86TU7 594 aaPredicted RBP11.38□□□□□ -0.59
PDPN-202ENST00000376057 ZBED8Q8IZ13 594 aa11.38□□□□□ -0.59
PDPN-202ENST00000376057 OR2W6PQ8NHA6 318 aa11.38□□□□□ -0.59
PDPN-202ENST00000376057 FAM76AQ8TAV0 307 aa11.38□□□□□ -0.59
PDPN-202ENST00000376057 IGSF8Q969P0 613 aa11.38□□□□□ -0.59
PDPN-202ENST00000376057 SIGLEC10Q96LC7 697 aa11.38□□□□□ -0.59
PDPN-202ENST00000376057 PWWP2AQ96N64 755 aa11.38□□□□□ -0.59
PDPN-202ENST00000376057 RNF38Q9H0F5 515 aa11.38□□□□□ -0.59
PDPN-202ENST00000376057 LMAN2LQ9H0V9 348 aa11.38□□□□□ -0.59
PDPN-202ENST00000376057 VANGL2Q9ULK5 521 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms