RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 ZCCHC7Q8N3Z6 543 aaKnown RBP13.95□□□□□ -0.18
COL4A1-201ENST00000375820 ENGASEQ8NFI3 743 aa13.95□□□□□ -0.18
COL4A1-201ENST00000375820 ALG9Q9H6U8 611 aa13.95□□□□□ -0.18
COL4A1-201ENST00000375820 GBA2Q9HCG7 927 aaPredicted RBP13.95□□□□□ -0.18
COL4A1-201ENST00000375820 TMEM39AQ9NV64 488 aa13.95□□□□□ -0.18
COL4A1-201ENST00000375820 USP42Q9H9J4 1324 aaKnown RBP13.95□□□□□ -0.18
COL4A1-201ENST00000375820 ASNA1O43681 348 aa13.95□□□□□ -0.18
COL4A1-201ENST00000375820 FGRP09769 529 aa13.95□□□□□ -0.18
COL4A1-201ENST00000375820 OR56A5P0C7T3 313 aa13.95□□□□□ -0.18
COL4A1-201ENST00000375820 EPHX2P34913 555 aa13.95□□□□□ -0.18
COL4A1-201ENST00000375820 STYK1Q6J9G0 422 aa13.95□□□□□ -0.18
COL4A1-201ENST00000375820 FRMD8P1Q9BZ68 369 aaPredicted RBP13.95□□□□□ -0.18
COL4A1-201ENST00000375820 ELL3Q9HB65 397 aaPredicted RBP13.95□□□□□ -0.18
COL4A1-201ENST00000375820 ARL15Q9NXU5 204 aa13.95□□□□□ -0.18
COL4A1-201ENST00000375820 KLQ9UEF7 1012 aa13.95□□□□□ -0.18
COL4A1-201ENST00000375820 GAS2O43903 313 aaKnown RBP13.95□□□□□ -0.18
COL4A1-201ENST00000375820 IL6P05231 212 aa13.95□□□□□ -0.18
COL4A1-201ENST00000375820 CDH17Q12864 832 aa13.95□□□□□ -0.18
COL4A1-201ENST00000375820 ABRAQ8N0Z2 381 aa13.95□□□□□ -0.18
COL4A1-201ENST00000375820 LRRC39Q96DD0 335 aa13.95□□□□□ -0.18
COL4A1-201ENST00000375820 NDNQ99608 321 aa13.95□□□□□ -0.18
COL4A1-201ENST00000375820 RHOBTB2Q9BYZ6 727 aa13.95□□□□□ -0.18
COL4A1-201ENST00000375820 CEP44Q9C0F1 390 aa13.95□□□□□ -0.18
COL4A1-201ENST00000375820 ARMC7Q9H6L4 198 aa13.95□□□□□ -0.18
COL4A1-201ENST00000375820 BARX2Q9UMQ3 279 aaPredicted RBP13.95□□□□□ -0.18
COL4A1-201ENST00000375820 QRICH2Q9H0J4 1663 aa13.95□□□□□ -0.18
COL4A1-201ENST00000375820 PGAM1P18669 254 aa13.95□□□□□ -0.18
COL4A1-201ENST00000375820 C4BPBP20851 252 aa13.95□□□□□ -0.18
COL4A1-201ENST00000375820 TRIM28Q13263 835 aaKnown RBP13.95□□□□□ -0.18
COL4A1-201ENST00000375820 PFKFB4Q16877 469 aa13.95□□□□□ -0.18
COL4A1-201ENST00000375820 ZNF605Q86T29 641 aa13.95□□□□□ -0.18
COL4A1-201ENST00000375820 BRSK2Q8IWQ3 736 aa13.95□□□□□ -0.18
COL4A1-201ENST00000375820 TMEM132CQ8N3T6 1108 aa13.95□□□□□ -0.18
COL4A1-201ENST00000375820 CLEC4MQ9H2X3 399 aaPredicted RBP13.95□□□□□ -0.18
COL4A1-201ENST00000375820 KANSL1LA0AUZ9 987 aa13.94□□□□□ -0.18
COL4A1-201ENST00000375820 LRRC14BA6NHZ5 514 aa13.94□□□□□ -0.18
COL4A1-201ENST00000375820 CENPXA8MT69 81 aa13.94□□□□□ -0.18
COL4A1-201ENST00000375820 SRSF11Q05519 484 aaKnown RBP13.94□□□□□ -0.18
COL4A1-201ENST00000375820 ZNF544Q6NX49 715 aa13.94□□□□□ -0.18
COL4A1-201ENST00000375820 DEFB132Q7Z7B7 95 aa13.94□□□□□ -0.18
COL4A1-201ENST00000375820 MTMR8Q96EF0 704 aa13.94□□□□□ -0.18
COL4A1-201ENST00000375820 S100A13Q99584 98 aa13.94□□□□□ -0.18
COL4A1-201ENST00000375820 ADPRHL2Q9NX46 363 aa13.94□□□□□ -0.18
COL4A1-201ENST00000375820 STON1Q9Y6Q2 735 aa13.94□□□□□ -0.18
COL4A1-201ENST00000375820 MTA2O94776 668 aa13.94□□□□□ -0.18
COL4A1-201ENST00000375820 PROCP04070 461 aa13.94□□□□□ -0.18
COL4A1-201ENST00000375820 RPA3P35244 121 aaPredicted RBP13.94□□□□□ -0.18
COL4A1-201ENST00000375820 RHAGQ02094 409 aa13.94□□□□□ -0.18
COL4A1-201ENST00000375820 BCL2L1Q07817 233 aa13.94□□□□□ -0.18
COL4A1-201ENST00000375820 TRAF3Q13114 568 aa13.94□□□□□ -0.18
COL4A1-201ENST00000375820 CRY1Q16526 586 aa13.94□□□□□ -0.18
COL4A1-201ENST00000375820 ITIH5Q86UX2 942 aa13.94□□□□□ -0.18
COL4A1-201ENST00000375820 MOSPD2Q8NHP6 518 aa13.94□□□□□ -0.18
COL4A1-201ENST00000375820 ZNF606Q8WXB4 792 aa13.94□□□□□ -0.18
COL4A1-201ENST00000375820 RMND5BQ96G75 393 aaPredicted RBP13.94□□□□□ -0.18
COL4A1-201ENST00000375820 BTBD10Q9BSF8 475 aa13.94□□□□□ -0.18
COL4A1-201ENST00000375820 AHSPQ9NZD4 102 aa13.94□□□□□ -0.18
COL4A1-201ENST00000375820 NINJ2Q9NZG7 142 aa13.94□□□□□ -0.18
COL4A1-201ENST00000375820 CNTFP26441 200 aa13.94□□□□□ -0.18
COL4A1-201ENST00000375820 BIKQ13323 160 aa13.94□□□□□ -0.18
COL4A1-201ENST00000375820 INSCQ1MX18 579 aa13.94□□□□□ -0.18
COL4A1-201ENST00000375820 XRRA1Q6P2D8 792 aa13.94□□□□□ -0.18
COL4A1-201ENST00000375820 TXNRD3Q86VQ6 643 aa13.94□□□□□ -0.18
COL4A1-201ENST00000375820 RTL3Q8N8U3 475 aaKnown RBP13.94□□□□□ -0.18
COL4A1-201ENST00000375820 HECW2Q9P2P5 1572 aa13.94□□□□□ -0.18
COL4A1-201ENST00000375820 LDLRP01130 860 aa13.94□□□□□ -0.18
COL4A1-201ENST00000375820 RBL1P28749 1068 aa13.94□□□□□ -0.18
COL4A1-201ENST00000375820 IDH2P48735 452 aaKnown RBP13.94□□□□□ -0.18
COL4A1-201ENST00000375820 C15orf59Q2T9L4 293 aaPredicted RBP13.94□□□□□ -0.18
COL4A1-201ENST00000375820 RORBQ92753 470 aa13.94□□□□□ -0.18
COL4A1-201ENST00000375820 PROX1Q92786 737 aa13.94□□□□□ -0.18
COL4A1-201ENST00000375820 NLNQ9BYT8 704 aa13.94□□□□□ -0.18
COL4A1-201ENST00000375820 MIR1-1HGQ9H1L0 117 aa13.94□□□□□ -0.18
COL4A1-201ENST00000375820 FBXO6Q9NRD1 293 aaPredicted RBP13.94□□□□□ -0.18
COL4A1-201ENST00000375820 TAS2R13Q9NYV9 303 aa13.94□□□□□ -0.18
COL4A1-201ENST00000375820 EFCAB10A6NFE3 127 aa13.94□□□□□ -0.18
COL4A1-201ENST00000375820 ZNF7P17097 686 aaPredicted RBP13.94□□□□□ -0.18
COL4A1-201ENST00000375820 POLNQ7Z5Q5 900 aa13.94□□□□□ -0.18
COL4A1-201ENST00000375820 CD302Q8IX05 232 aa13.94□□□□□ -0.18
COL4A1-201ENST00000375820 DAGLBQ8NCG7 672 aa13.94□□□□□ -0.18
COL4A1-201ENST00000375820 KIAA0895Q8NCT3 520 aa13.94□□□□□ -0.18
COL4A1-201ENST00000375820 OR56A4Q8NGH8 313 aa13.94□□□□□ -0.18
COL4A1-201ENST00000375820 BDH2Q9BUT1 245 aa13.94□□□□□ -0.18
COL4A1-201ENST00000375820 EPS8L2Q9H6S3 715 aa13.94□□□□□ -0.18
COL4A1-201ENST00000375820 ITGA11Q9UKX5 1188 aa13.94□□□□□ -0.18
COL4A1-201ENST00000375820 KIAA1257Q9ULG3 409 aa13.94□□□□□ -0.18
COL4A1-201ENST00000375820 TPP2P29144 1249 aaPredicted RBP13.93□□□□□ -0.18
COL4A1-201ENST00000375820 SERPINH1P50454 418 aaKnown RBP13.93□□□□□ -0.18
COL4A1-201ENST00000375820 PFKPQ01813 784 aa13.93□□□□□ -0.18
COL4A1-201ENST00000375820 GPR156Q8NFN8 814 aa13.93□□□□□ -0.18
COL4A1-201ENST00000375820 SYTL5Q8TDW5 730 aaPredicted RBP13.93□□□□□ -0.18
COL4A1-201ENST00000375820 ANKZF1Q9H8Y5 726 aa13.93□□□□□ -0.18
COL4A1-201ENST00000375820 ZFP14Q9HCL3 533 aa13.93□□□□□ -0.18
COL4A1-201ENST00000375820 ACP6Q9NPH0 428 aa13.93□□□□□ -0.18
COL4A1-201ENST00000375820 BTRCQ9Y297 605 aa13.93□□□□□ -0.18
COL4A1-201ENST00000375820 GPSM3Q9Y4H4 160 aa13.93□□□□□ -0.18
COL4A1-201ENST00000375820 E5RJQ4 531 aa13.93□□□□□ -0.18
COL4A1-201ENST00000375820 RARAP10276 462 aa13.93□□□□□ -0.18
COL4A1-201ENST00000375820 MFSD10Q14728 455 aa13.93□□□□□ -0.18
COL4A1-201ENST00000375820 MIIPQ5JXC2 388 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms