RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 FBXL18Q96ME1 805 aa18.31■□□□□ 0.52
PTPDC1-202ENST00000375360 PCDHGC3Q9UN70 934 aa18.31■□□□□ 0.52
PTPDC1-202ENST00000375360 CHADO15335 359 aa18.31■□□□□ 0.52
PTPDC1-202ENST00000375360 DAB1O75553 588 aa18.31■□□□□ 0.52
PTPDC1-202ENST00000375360 UNGP13051 313 aaPredicted RBP18.31■□□□□ 0.52
PTPDC1-202ENST00000375360 ASPAP45381 313 aa18.31■□□□□ 0.52
PTPDC1-202ENST00000375360 NOVP48745 357 aa18.31■□□□□ 0.52
PTPDC1-202ENST00000375360 SOWAHAQ2M3V2 549 aa18.31■□□□□ 0.52
PTPDC1-202ENST00000375360 ZNF792Q3KQV3 632 aa18.31■□□□□ 0.52
PTPDC1-202ENST00000375360 RASGEF1CQ8N431 466 aa18.31■□□□□ 0.52
PTPDC1-202ENST00000375360 PLD5Q8N7P1 536 aa18.31■□□□□ 0.52
PTPDC1-202ENST00000375360 TMEM120AQ9BXJ8 343 aa18.31■□□□□ 0.52
PTPDC1-202ENST00000375360 GMIPQ9P107 970 aa18.31■□□□□ 0.52
PTPDC1-202ENST00000375360 SNX10Q9Y5X0 201 aa18.31■□□□□ 0.52
PTPDC1-202ENST00000375360 NUP188Q5SRE5 1749 aa18.31■□□□□ 0.52
PTPDC1-202ENST00000375360 CYP2C18P33260 490 aa18.31■□□□□ 0.52
PTPDC1-202ENST00000375360 SERPINH1P50454 418 aaKnown RBP18.31■□□□□ 0.52
PTPDC1-202ENST00000375360 DNAL1Q4LDG9 190 aa18.31■□□□□ 0.52
PTPDC1-202ENST00000375360 TIGD5Q53EQ6 642 aa18.31■□□□□ 0.52
PTPDC1-202ENST00000375360 UGT3A1Q6NUS8 523 aa18.31■□□□□ 0.52
PTPDC1-202ENST00000375360 STRADAQ7RTN6 431 aa18.31■□□□□ 0.52
PTPDC1-202ENST00000375360 TULP2O00295 520 aa18.3■□□□□ 0.52
PTPDC1-202ENST00000375360 TM9SF1O15321 606 aa18.3■□□□□ 0.52
PTPDC1-202ENST00000375360 FGF10O15520 208 aaPredicted RBP18.3■□□□□ 0.52
PTPDC1-202ENST00000375360 HCRTO43612 131 aa18.3■□□□□ 0.52
PTPDC1-202ENST00000375360 CDKN2BP42772 138 aa18.3■□□□□ 0.52
PTPDC1-202ENST00000375360 BCL2L1Q07817 233 aa18.3■□□□□ 0.52
PTPDC1-202ENST00000375360 ZNF618Q5T7W0 954 aa18.3■□□□□ 0.52
PTPDC1-202ENST00000375360 SEL1L3Q68CR1 1132 aa18.3■□□□□ 0.52
PTPDC1-202ENST00000375360 GDF6Q6KF10 455 aaPredicted RBP18.3■□□□□ 0.52
PTPDC1-202ENST00000375360 ZNF467Q7Z7K2 595 aaPredicted RBP18.3■□□□□ 0.52
PTPDC1-202ENST00000375360 TRIML2Q8N7C3 387 aa18.3■□□□□ 0.52
PTPDC1-202ENST00000375360 MRPL46Q9H2W6 279 aaKnown RBP18.3■□□□□ 0.52
PTPDC1-202ENST00000375360 SYTL2Q9HCH5 934 aa18.3■□□□□ 0.52
PTPDC1-202ENST00000375360 MRPL40Q9NQ50 206 aaKnown RBP18.3■□□□□ 0.52
PTPDC1-202ENST00000375360 PNMA8BQ9ULN7 279 aaPredicted RBP18.3■□□□□ 0.52
PTPDC1-202ENST00000375360 TPST1O60507 370 aa18.3■□□□□ 0.52
PTPDC1-202ENST00000375360 CXCL14O95715 111 aa18.3■□□□□ 0.52
PTPDC1-202ENST00000375360 NEUROG2Q9H2A3 272 aa18.3■□□□□ 0.52
PTPDC1-202ENST00000375360 COG4Q9H9E3 785 aa18.3■□□□□ 0.52
PTPDC1-202ENST00000375360 PCDH8O95206 1070 aa18.3■□□□□ 0.52
PTPDC1-202ENST00000375360 SLC26A9Q7LBE3 791 aa18.3■□□□□ 0.52
PTPDC1-202ENST00000375360 FAM228AQ86W67 206 aa18.3■□□□□ 0.52
PTPDC1-202ENST00000375360 EIF1ADQ8N9N8 165 aaKnown RBP18.3■□□□□ 0.52
PTPDC1-202ENST00000375360 PCYOX1LQ8NBM8 494 aa18.3■□□□□ 0.52
PTPDC1-202ENST00000375360 ADAM28Q9UKQ2 775 aa18.3■□□□□ 0.52
PTPDC1-202ENST00000375360 YJEFN3A6XGL0 299 aa18.3■□□□□ 0.52
PTPDC1-202ENST00000375360 E7ENQ6 273 aa18.3■□□□□ 0.52
PTPDC1-202ENST00000375360 TOMM70O94826 608 aa18.3■□□□□ 0.52
PTPDC1-202ENST00000375360 RBP1P09455 135 aa18.3■□□□□ 0.52
PTPDC1-202ENST00000375360 GABRR2P28476 465 aa18.3■□□□□ 0.52
PTPDC1-202ENST00000375360 GRB14Q14449 540 aa18.3■□□□□ 0.52
PTPDC1-202ENST00000375360 SPANXN3Q5MJ09 141 aa18.3■□□□□ 0.52
PTPDC1-202ENST00000375360 PDPK2PQ6A1A2 396 aa18.3■□□□□ 0.52
PTPDC1-202ENST00000375360 C11orf96Q7Z7L8 435 aa18.3■□□□□ 0.52
PTPDC1-202ENST00000375360 GRIN3AQ8TCU5 1115 aa18.3■□□□□ 0.52
PTPDC1-202ENST00000375360 DQX1Q8TE96 717 aaKnown RBP18.3■□□□□ 0.52
PTPDC1-202ENST00000375360 LRRC39Q96DD0 335 aa18.3■□□□□ 0.52
PTPDC1-202ENST00000375360 PRKD2Q9BZL6 878 aa18.3■□□□□ 0.52
PTPDC1-202ENST00000375360 NR2E3Q9Y5X4 410 aa18.3■□□□□ 0.52
PTPDC1-202ENST00000375360 CLASP2O75122 1294 aaKnown RBP18.29■□□□□ 0.52
PTPDC1-202ENST00000375360 XYLBO75191 536 aa18.29■□□□□ 0.52
PTPDC1-202ENST00000375360 COPAP53621 1224 aa18.29■□□□□ 0.52
PTPDC1-202ENST00000375360 CDK16Q00536 496 aa18.29■□□□□ 0.52
PTPDC1-202ENST00000375360 INTS6LQ5JSJ4 861 aaKnown RBP18.29■□□□□ 0.52
PTPDC1-202ENST00000375360 OTOAQ7RTW8 1153 aa18.29■□□□□ 0.52
PTPDC1-202ENST00000375360 MYO1HQ8N1T3 1032 aa18.29■□□□□ 0.52
PTPDC1-202ENST00000375360 RAB42Q8N4Z0 105 aa18.29■□□□□ 0.52
PTPDC1-202ENST00000375360 CCDC185Q8N715 623 aa18.29■□□□□ 0.52
PTPDC1-202ENST00000375360 OR6K2Q8NGY2 324 aa18.29■□□□□ 0.52
PTPDC1-202ENST00000375360 ZNF75CPQ92670 426 aaPredicted RBP18.29■□□□□ 0.52
PTPDC1-202ENST00000375360 OSGEPL1Q9H4B0 414 aa18.29■□□□□ 0.52
PTPDC1-202ENST00000375360 MAP1BP46821 2468 aaKnown RBP18.29■□□□□ 0.52
PTPDC1-202ENST00000375360 CRYBG1Q9Y4K1 1723 aa18.29■□□□□ 0.52
PTPDC1-202ENST00000375360 TFE3P19532 575 aaPredicted RBP18.29■□□□□ 0.52
PTPDC1-202ENST00000375360 FMO4P31512 558 aa18.29■□□□□ 0.52
PTPDC1-202ENST00000375360 ABCE1P61221 599 aaKnown RBP18.29■□□□□ 0.52
PTPDC1-202ENST00000375360 BOP1Q14137 746 aaKnown RBP18.29■□□□□ 0.52
PTPDC1-202ENST00000375360 MAB21L3Q8N8X9 362 aa18.29■□□□□ 0.52
PTPDC1-202ENST00000375360 SCAMP5Q8TAC9 235 aa18.29■□□□□ 0.52
PTPDC1-202ENST00000375360 SPPL2BQ8TCT7 592 aa18.29■□□□□ 0.52
PTPDC1-202ENST00000375360 APOPT1Q96IL0 206 aa18.29■□□□□ 0.52
PTPDC1-202ENST00000375360 IL1RAPL1Q9NZN1 696 aa18.29■□□□□ 0.52
PTPDC1-202ENST00000375360 GPD2P43304 727 aa18.29■□□□□ 0.52
PTPDC1-202ENST00000375360 RASA2Q15283 850 aa18.29■□□□□ 0.52
PTPDC1-202ENST00000375360 IQCKQ8N0W5 287 aa18.29■□□□□ 0.52
PTPDC1-202ENST00000375360 CNPY4Q8N129 248 aa18.29■□□□□ 0.52
PTPDC1-202ENST00000375360 SLAIN1Q8ND83 568 aa18.29■□□□□ 0.52
PTPDC1-202ENST00000375360 C2orf49Q9BVC5 232 aaPredicted RBP18.29■□□□□ 0.52
PTPDC1-202ENST00000375360 IL22Q9GZX6 179 aa18.29■□□□□ 0.52
PTPDC1-202ENST00000375360 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.29■□□□□ 0.52
PTPDC1-202ENST00000375360 ING2Q9H160 280 aa18.29■□□□□ 0.52
PTPDC1-202ENST00000375360 BPIFA1Q9NP55 256 aa18.29■□□□□ 0.52
PTPDC1-202ENST00000375360 ARMCX1Q9P291 453 aa18.29■□□□□ 0.52
PTPDC1-202ENST00000375360 DOLKQ9UPQ8 538 aa18.29■□□□□ 0.52
PTPDC1-202ENST00000375360 MRPS23Q9Y3D9 190 aaKnown RBP18.29■□□□□ 0.52
PTPDC1-202ENST00000375360 VIRMAQ69YN4 1812 aaKnown RBP18.29■□□□□ 0.52
PTPDC1-202ENST00000375360 C4BP0C0L5 1744 aa18.29■□□□□ 0.52
PTPDC1-202ENST00000375360 OR6C75A6NL08 312 aa18.28■□□□□ 0.52
PTPDC1-202ENST00000375360 TRIM13O60858 407 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms